RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 FAM193BQ96PV7 902 aaPredicted RBP17.23■□□□□ 0.35
LAPTM4B-201ENST00000445593 HAO1Q9UJM8 370 aa17.23■□□□□ 0.35
LAPTM4B-201ENST00000445593 HACD1B0YJ81 288 aa17.23■□□□□ 0.35
LAPTM4B-201ENST00000445593 RFPL1O75677 317 aa17.23■□□□□ 0.35
LAPTM4B-201ENST00000445593 KRT38O76015 456 aa17.23■□□□□ 0.35
LAPTM4B-201ENST00000445593 MT-CYBP00156 380 aaPredicted RBP17.23■□□□□ 0.35
LAPTM4B-201ENST00000445593 PDE1BQ01064 536 aa17.23■□□□□ 0.35
LAPTM4B-201ENST00000445593 SMYD5Q6GMV2 418 aa17.23■□□□□ 0.35
LAPTM4B-201ENST00000445593 ARNTL2Q8WYA1 636 aa17.23■□□□□ 0.35
LAPTM4B-201ENST00000445593 LRRC37BQ96QE4 947 aa17.23■□□□□ 0.35
LAPTM4B-201ENST00000445593 ZFATQ9P243 1243 aa17.23■□□□□ 0.35
LAPTM4B-201ENST00000445593 TXNDC16Q9P2K2 825 aa17.23■□□□□ 0.35
LAPTM4B-201ENST00000445593 G3BP2Q9UN86 482 aaKnown RBP17.23■□□□□ 0.35
LAPTM4B-201ENST00000445593 ARHGAP42A6NI28 874 aa17.22■□□□□ 0.35
LAPTM4B-201ENST00000445593 PRKCHP24723 683 aa17.22■□□□□ 0.35
LAPTM4B-201ENST00000445593 MAGEA3P43357 314 aa17.22■□□□□ 0.35
LAPTM4B-201ENST00000445593 TMPRSS15P98073 1019 aa17.22■□□□□ 0.35
LAPTM4B-201ENST00000445593 SETDB1Q15047 1291 aa17.22■□□□□ 0.35
LAPTM4B-201ENST00000445593 PAFAH1B3Q15102 231 aaKnown RBP17.22■□□□□ 0.35
LAPTM4B-201ENST00000445593 FYB2Q5VWT5 728 aa17.22■□□□□ 0.35
LAPTM4B-201ENST00000445593 FAM171BQ6P995 826 aa17.22■□□□□ 0.35
LAPTM4B-201ENST00000445593 CMC1Q7Z7K0 106 aa17.22■□□□□ 0.35
LAPTM4B-201ENST00000445593 MTDHQ86UE4 582 aaKnown RBP17.22■□□□□ 0.35
LAPTM4B-201ENST00000445593 TBC1D31Q96DN5 1066 aa17.22■□□□□ 0.35
LAPTM4B-201ENST00000445593 PRR11Q96HE9 360 aaPredicted RBP17.22■□□□□ 0.35
LAPTM4B-201ENST00000445593 AGAP2Q99490 1192 aa17.22■□□□□ 0.35
LAPTM4B-201ENST00000445593 RXFP1Q9HBX9 757 aa17.22■□□□□ 0.35
LAPTM4B-201ENST00000445593 STARD7Q9NQZ5 370 aa17.22■□□□□ 0.35
LAPTM4B-201ENST00000445593 ACSS2Q9NR19 701 aa17.22■□□□□ 0.35
LAPTM4B-201ENST00000445593 FBXO6Q9NRD1 293 aaPredicted RBP17.22■□□□□ 0.35
LAPTM4B-201ENST00000445593 RCOR3Q9P2K3 495 aaPredicted RBP17.22■□□□□ 0.35
LAPTM4B-201ENST00000445593 NUMBLQ9Y6R0 609 aa17.22■□□□□ 0.35
LAPTM4B-201ENST00000445593 PAGE1O75459 146 aa17.22■□□□□ 0.35
LAPTM4B-201ENST00000445593 TADA2AO75478 443 aa17.22■□□□□ 0.35
LAPTM4B-201ENST00000445593 CD68P34810 354 aaPredicted RBP17.22■□□□□ 0.35
LAPTM4B-201ENST00000445593 PARP6Q2NL67 630 aa17.22■□□□□ 0.35
LAPTM4B-201ENST00000445593 BNIPLQ7Z465 357 aa17.22■□□□□ 0.35
LAPTM4B-201ENST00000445593 SMC1BQ8NDV3 1235 aa17.22■□□□□ 0.35
LAPTM4B-201ENST00000445593 FCRL3Q96P31 734 aaPredicted RBP17.22■□□□□ 0.35
LAPTM4B-201ENST00000445593 STARD13Q9Y3M8 1113 aa17.22■□□□□ 0.35
LAPTM4B-201ENST00000445593 ZNF487B1APH4 448 aa17.22■□□□□ 0.35
LAPTM4B-201ENST00000445593 TPP1O14773 563 aa17.22■□□□□ 0.35
LAPTM4B-201ENST00000445593 GLUD2P49448 558 aa17.22■□□□□ 0.35
LAPTM4B-201ENST00000445593 NEK3P51956 506 aa17.22■□□□□ 0.35
LAPTM4B-201ENST00000445593 HTRA3P83110 453 aa17.22■□□□□ 0.35
LAPTM4B-201ENST00000445593 CHI3L2Q15782 390 aa17.22■□□□□ 0.35
LAPTM4B-201ENST00000445593 LGSNQ5TDP6 509 aa17.22■□□□□ 0.35
LAPTM4B-201ENST00000445593 NLRP9Q7RTR0 991 aa17.22■□□□□ 0.35
LAPTM4B-201ENST00000445593 ZNF778Q96MU6 729 aa17.22■□□□□ 0.35
LAPTM4B-201ENST00000445593 TBC1D13Q9NVG8 400 aa17.22■□□□□ 0.35
LAPTM4B-201ENST00000445593 ZNF358Q9NW07 568 aa17.22■□□□□ 0.35
LAPTM4B-201ENST00000445593 OSER1Q9NX31 292 aa17.22■□□□□ 0.35
LAPTM4B-201ENST00000445593 FETUBQ9UGM5 382 aa17.22■□□□□ 0.35
LAPTM4B-201ENST00000445593 BPTFQ12830 3046 aa17.21■□□□□ 0.35
LAPTM4B-201ENST00000445593 TM9SF1O15321 606 aa17.21■□□□□ 0.35
LAPTM4B-201ENST00000445593 MAGEA6P43360 314 aa17.21■□□□□ 0.35
LAPTM4B-201ENST00000445593 CXCR3P49682 368 aa17.21■□□□□ 0.35
LAPTM4B-201ENST00000445593 USP46P62068 366 aa17.21■□□□□ 0.35
LAPTM4B-201ENST00000445593 TRIM71Q2Q1W2 868 aaKnown RBP17.21■□□□□ 0.35
LAPTM4B-201ENST00000445593 PDZD4Q76G19 769 aaPredicted RBP17.21■□□□□ 0.35
LAPTM4B-201ENST00000445593 ZNF276Q8N554 614 aa17.21■□□□□ 0.35
LAPTM4B-201ENST00000445593 TTC16Q8NEE8 873 aa17.21■□□□□ 0.35
LAPTM4B-201ENST00000445593 N4BP2L2Q92802 583 aaPredicted RBP17.21■□□□□ 0.35
LAPTM4B-201ENST00000445593 ALKBH8Q96BT7 664 aaKnown RBP17.21■□□□□ 0.35
LAPTM4B-201ENST00000445593 LBHD1Q9BQE6 289 aaPredicted RBP17.21■□□□□ 0.35
LAPTM4B-201ENST00000445593 GORASP1Q9BQQ3 440 aa17.21■□□□□ 0.35
LAPTM4B-201ENST00000445593 FRMD8Q9BZ67 464 aaPredicted RBP17.21■□□□□ 0.35
LAPTM4B-201ENST00000445593 VPS11Q9H270 941 aa17.21■□□□□ 0.35
LAPTM4B-201ENST00000445593 CAB39LQ9H9S4 337 aa17.21■□□□□ 0.35
LAPTM4B-201ENST00000445593 CHRAC1Q9NRG0 131 aa17.21■□□□□ 0.35
LAPTM4B-201ENST00000445593 FAM237BA0A1B0GVD1 139 aa17.21■□□□□ 0.35
LAPTM4B-201ENST00000445593 FAM159BA6NKW6 160 aa17.21■□□□□ 0.35
LAPTM4B-201ENST00000445593 GARSP41250 739 aaKnown RBP17.21■□□□□ 0.35
LAPTM4B-201ENST00000445593 ZBTB16Q05516 673 aa17.21■□□□□ 0.35
LAPTM4B-201ENST00000445593 SEMA3BQ13214 749 aa17.21■□□□□ 0.35
LAPTM4B-201ENST00000445593 RASA2Q15283 850 aa17.21■□□□□ 0.35
LAPTM4B-201ENST00000445593 HSP90AA5PQ58FG0 334 aa17.21■□□□□ 0.35
LAPTM4B-201ENST00000445593 NOMO2Q5JPE7 1267 aa17.21■□□□□ 0.35
LAPTM4B-201ENST00000445593 FAM171A1Q5VUB5 890 aa17.21■□□□□ 0.35
LAPTM4B-201ENST00000445593 LRRC8BQ6P9F7 803 aa17.21■□□□□ 0.35
LAPTM4B-201ENST00000445593 PNPLA1Q8N8W4 532 aa17.21■□□□□ 0.35
LAPTM4B-201ENST00000445593 IPMKQ8NFU5 416 aa17.21■□□□□ 0.35
LAPTM4B-201ENST00000445593 PPP1R14CQ8TAE6 165 aa17.21■□□□□ 0.35
LAPTM4B-201ENST00000445593 FCRL2Q96LA5 508 aaPredicted RBP17.21■□□□□ 0.35
LAPTM4B-201ENST00000445593 UNKQ9C0B0 810 aaKnown RBP17.21■□□□□ 0.35
LAPTM4B-201ENST00000445593 CSNK1G1Q9HCP0 422 aa17.21■□□□□ 0.35
LAPTM4B-201ENST00000445593 VANGL2Q9ULK5 521 aa17.21■□□□□ 0.35
LAPTM4B-201ENST00000445593 TDRD15B5MCY1 1934 aaKnown RBP17.21■□□□□ 0.34
LAPTM4B-201ENST00000445593 C9IYK1 514 aa17.2■□□□□ 0.34
LAPTM4B-201ENST00000445593 KCNA4P22459 653 aa17.2■□□□□ 0.34
LAPTM4B-201ENST00000445593 ETV4P43268 484 aa17.2■□□□□ 0.34
LAPTM4B-201ENST00000445593 RPL10AP62906 217 aaKnown RBP17.2■□□□□ 0.34
LAPTM4B-201ENST00000445593 E2F5Q15329 346 aa17.2■□□□□ 0.34
LAPTM4B-201ENST00000445593 TAF1BQ53T94 588 aaPredicted RBP17.2■□□□□ 0.34
LAPTM4B-201ENST00000445593 DCLRE1AQ6PJP8 1040 aa17.2■□□□□ 0.34
LAPTM4B-201ENST00000445593 SH2D5Q6ZV89 423 aa17.2■□□□□ 0.34
LAPTM4B-201ENST00000445593 C14orf80Q86SX3 495 aa17.2■□□□□ 0.34
LAPTM4B-201ENST00000445593 PSTKQ8IV42 348 aaKnown RBP17.2■□□□□ 0.34
LAPTM4B-201ENST00000445593 ABI1Q8IZP0 508 aa17.2■□□□□ 0.34
LAPTM4B-201ENST00000445593 TET1Q8NFU7 2136 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms