RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, human

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR3-206	ENST00000444475	PGM2	Q96G03	612 aa		4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	TRIB1	Q96RU8	372 aa		4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	SF3B5	Q9BWJ5	86 aa	Known RBP	4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	OSBPL6	Q9BZF3	934 aa		4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	RHBG	Q9H310	441 aa		4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	SUGCT	Q9HAC7	445 aa		4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	TOMM22	Q9NS69	142 aa		4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	SPAST	Q9UBP0	616 aa		4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	CDH7	Q9ULB5	785 aa		4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	PLB1	Q6P1J6	1458 aa		4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	TRIM49B	A6NDI0	452 aa		4.08	□□□□□ -1.76
UBR3-206	ENST00000444475		F8WDY8	70 aa		4.08	□□□□□ -1.76
UBR3-206	ENST00000444475		H7C1D1	291 aa		4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	CCDC188	H7C350	402 aa		4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	OR5F1	O95221	314 aa		4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	CHEK2	O96017	543 aa		4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	CYC1	P08574	325 aa		4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	EGR1	P18146	543 aa		4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	FSHR	P23945	695 aa		4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	ACAT1	P24752	427 aa	Known RBP	4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	U2AF2	P26368	475 aa	Known RBP eCLIP	4.08	□□□□□ -1.76	5e-7	■□□□□ 9.8
UBR3-206	ENST00000444475	MAGEA10	P43363	369 aa	Predicted RBP	4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	CSNK2B	P67870	215 aa		4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	TNK2	Q07912	1038 aa		4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	PTK6	Q13882	451 aa		4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	SNTB1	Q13884	538 aa	Known RBP	4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	CBFB	Q13951	182 aa		4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	USP10	Q14694	798 aa	Known RBP	4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	KRT31	Q15323	416 aa		4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	MAN2A1	Q16706	1144 aa		4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	AOC3	Q16853	763 aa		4.08	□□□□□ -1.76
UBR3-206	ENST00000444475		Q3ZCU0	254 aa		4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	COLEC12	Q5KU26	742 aa		4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	USP50	Q70EL3	339 aa	Predicted RBP	4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	LRRC8D	Q7L1W4	858 aa		4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	SLC51A	Q86UW1	340 aa		4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	KBTBD6	Q86V97	674 aa		4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	MPP5	Q8N3R9	675 aa		4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	CMAS	Q8NFW8	434 aa	Predicted RBP	4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	MYCBPAP	Q8TBZ2	947 aa		4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	NRG4	Q8WWG1	115 aa		4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	EFHD2	Q96C19	240 aa	Predicted RBP	4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	SECISBP2	Q96T21	854 aa	Known RBP	4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	C1orf43	Q9BWL3	253 aa		4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	BOC	Q9BWV1	1114 aa		4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	SLC5A7	Q9GZV3	580 aa		4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	SLC25A18	Q9H1K4	315 aa		4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	TAF1D	Q9H5J8	278 aa	Predicted RBP	4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	GPRC5C	Q9NQ84	441 aa		4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	FAM212B	Q9NTI7	297 aa	Predicted RBP	4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	ABCB8	Q9NUT2	735 aa		4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	KLHL3	Q9UH77	587 aa		4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	PPIL1	Q9Y3C6	166 aa		4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	4.08	□□□□□ -1.76
UBR3-206	ENST00000444475	TSPOAP1	O95153	1857 aa		4.08	□□□□□ -1.76
UBR3-206	ENST00000444475		A0A1W2PQF6	199 aa		4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	C2CD2L	O14523	706 aa		4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	FCHO1	O14526	889 aa		4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	ZNF862	O60290	1169 aa		4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	MFN2	O95140	757 aa		4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	ECD	O95905	644 aa	Predicted RBP	4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	AMY2A	P04746	511 aa		4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	CYP21A2	P08686	494 aa		4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	MTHFD2	P13995	350 aa		4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	AMY2B	P19961	511 aa		4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	CCR10	P46092	362 aa		4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	CDKN1B	P46527	198 aa		4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	MAPKAPK2	P49137	400 aa		4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	KCNQ4	P56696	695 aa		4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	TAS2R40	P59535	323 aa		4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	AMPD2	Q01433	879 aa		4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	DUSP4	Q13115	394 aa		4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	BAAT	Q14032	418 aa	Predicted RBP	4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	PLA1A	Q53H76	456 aa		4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	ZBTB41	Q5SVQ8	909 aa		4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	MAP1S	Q66K74	1059 aa	Predicted RBP	4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	TIGD7	Q6NT04	549 aa	Predicted RBP	4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	NCEH1	Q6PIU2	408 aa		4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	MSANTD1	Q6ZTZ1	278 aa		4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	SLC24A5	Q71RS6	500 aa		4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	SYVN1	Q86TM6	617 aa		4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	ZNF598	Q86UK7	904 aa	Known RBP	4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	RBM15B	Q8NDT2	890 aa	Known RBP	4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	URGCP	Q8TCY9	931 aa		4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	GPBAR1	Q8TDU6	330 aa		4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	LRRC8C	Q8TDW0	803 aa		4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	PTER	Q96BW5	349 aa		4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	HMCES	Q96FZ2	354 aa		4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	MIPEP	Q99797	713 aa		4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	LPIN3	Q9BQK8	851 aa		4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	RAB33B	Q9H082	229 aa		4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	SEMA4B	Q9NPR2	832 aa	Predicted RBP	4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	TMEM140	Q9NV12	185 aa		4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	FKBP14	Q9NWM8	211 aa		4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	DDX25	Q9UHL0	483 aa	Known RBP	4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	OSGIN1	Q9UJX0	560 aa		4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	DNPEP	Q9ULA0	475 aa		4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	NCOA3	Q9Y6Q9	1424 aa		4.07	□□□□□ -1.76
UBR3-206	ENST00000444475	KLHL2	O95198	593 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms