RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 POLR3BQ9NW08 1133 aaPredicted RBP12.7□□□□□ -0.38
USP1-203ENST00000442679 PPARGC1AQ9UBK2 798 aaKnown RBP12.7□□□□□ -0.38
USP1-203ENST00000442679 USP18Q9UMW8 372 aa12.7□□□□□ -0.38
USP1-203ENST00000442679 SLC8A2Q9UPR5 921 aa12.7□□□□□ -0.38
USP1-203ENST00000442679 HCN4Q9Y3Q4 1203 aa12.7□□□□□ -0.38
USP1-203ENST00000442679 MYOFQ9NZM1 2061 aa12.69□□□□□ -0.38
USP1-203ENST00000442679 ZDBF2Q9HCK1 2354 aa12.69□□□□□ -0.38
USP1-203ENST00000442679 LRIG2O94898 1065 aa12.69□□□□□ -0.38
USP1-203ENST00000442679 PROSCO94903 275 aa12.69□□□□□ -0.38
USP1-203ENST00000442679 IPO7O95373 1038 aaKnown RBP12.69□□□□□ -0.38
USP1-203ENST00000442679 MOCS3O95396 460 aa12.69□□□□□ -0.38
USP1-203ENST00000442679 HNRNPLP14866 589 aaKnown RBP eCLIP12.69□□□□□ -0.38
USP1-203ENST00000442679 POLR2EP19388 210 aaKnown RBP12.69□□□□□ -0.38
USP1-203ENST00000442679 NTSR1P30989 418 aa12.69□□□□□ -0.38
USP1-203ENST00000442679 L1CAMP32004 1257 aa12.69□□□□□ -0.38
USP1-203ENST00000442679 WASP42768 502 aa12.69□□□□□ -0.38
USP1-203ENST00000442679 SSR1P43307 286 aaKnown RBP12.69□□□□□ -0.38
USP1-203ENST00000442679 OXCT1P55809 520 aa12.69□□□□□ -0.38
USP1-203ENST00000442679 SLC12A1Q13621 1099 aa12.69□□□□□ -0.38
USP1-203ENST00000442679 DMC1Q14565 340 aa12.69□□□□□ -0.38
USP1-203ENST00000442679 E2F5Q15329 346 aa12.69□□□□□ -0.38
USP1-203ENST00000442679 FUT11Q495W5 492 aa12.69□□□□□ -0.38
USP1-203ENST00000442679 HSF5Q4G112 596 aaPredicted RBP12.69□□□□□ -0.38
USP1-203ENST00000442679 MANEALQ5VSG8 457 aa12.69□□□□□ -0.38
USP1-203ENST00000442679 MBLAC2Q68D91 279 aa12.69□□□□□ -0.38
USP1-203ENST00000442679 CXorf57Q6NSI4 855 aaKnown RBP12.69□□□□□ -0.38
USP1-203ENST00000442679 SYT13Q7L8C5 426 aa12.69□□□□□ -0.38
USP1-203ENST00000442679 TFAP2DQ7Z6R9 452 aa12.69□□□□□ -0.38
USP1-203ENST00000442679 TMEM139Q8IV31 216 aa12.69□□□□□ -0.38
USP1-203ENST00000442679 CHPFQ8IZ52 775 aa12.69□□□□□ -0.38
USP1-203ENST00000442679 PRSS33Q8NF86 280 aa12.69□□□□□ -0.38
USP1-203ENST00000442679 SORCS1Q8WY21 1168 aa12.69□□□□□ -0.38
USP1-203ENST00000442679 TBC1D31Q96DN5 1066 aa12.69□□□□□ -0.38
USP1-203ENST00000442679 PEBP4Q96S96 227 aa12.69□□□□□ -0.38
USP1-203ENST00000442679 ACOX2Q99424 681 aa12.69□□□□□ -0.38
USP1-203ENST00000442679 KCNH6Q9H252 994 aa12.69□□□□□ -0.38
USP1-203ENST00000442679 DHX35Q9H5Z1 703 aaKnown RBP12.69□□□□□ -0.38
USP1-203ENST00000442679 PRMT8Q9NR22 394 aaPredicted RBP12.69□□□□□ -0.38
USP1-203ENST00000442679 GPATCH2LQ9NWQ4 482 aa12.69□□□□□ -0.38
USP1-203ENST00000442679 THAP10Q9P2Z0 257 aaPredicted RBP12.69□□□□□ -0.38
USP1-203ENST00000442679 LCMT1Q9UIC8 334 aa12.69□□□□□ -0.38
USP1-203ENST00000442679 FBXO4Q9UKT5 387 aa12.69□□□□□ -0.38
USP1-203ENST00000442679 INTS6Q9UL03 887 aaKnown RBP12.69□□□□□ -0.38
USP1-203ENST00000442679 MMP17Q9ULZ9 603 aa12.69□□□□□ -0.38
USP1-203ENST00000442679 PLA2G4CQ9UP65 541 aa12.69□□□□□ -0.38
USP1-203ENST00000442679 AP4E1Q9UPM8 1137 aa12.69□□□□□ -0.38
USP1-203ENST00000442679 TBC1D30Q9Y2I9 924 aa12.69□□□□□ -0.38
USP1-203ENST00000442679 TMEM110-MUSTN1A8MSY1 372 aa12.68□□□□□ -0.38
USP1-203ENST00000442679 SGK1O00141 431 aa12.68□□□□□ -0.38
USP1-203ENST00000442679 NPC1O15118 1278 aa12.68□□□□□ -0.38
USP1-203ENST00000442679 CREB3O43889 395 aa12.68□□□□□ -0.38
USP1-203ENST00000442679 ADAM23O75077 832 aa12.68□□□□□ -0.38
USP1-203ENST00000442679 PAPSS2O95340 614 aaPredicted RBP12.68□□□□□ -0.38
USP1-203ENST00000442679 ATP5BP06576 529 aaKnown RBP12.68□□□□□ -0.38
USP1-203ENST00000442679 TCF4P15884 667 aa12.68□□□□□ -0.38
USP1-203ENST00000442679 RHOQP17081 205 aa12.68□□□□□ -0.38
USP1-203ENST00000442679 COL9A1P20849 921 aa12.68□□□□□ -0.38
USP1-203ENST00000442679 IL1R2P27930 398 aa12.68□□□□□ -0.38
USP1-203ENST00000442679 MZF1P28698 734 aaPredicted RBP12.68□□□□□ -0.38
USP1-203ENST00000442679 OR1E1P30953 314 aa12.68□□□□□ -0.38
USP1-203ENST00000442679 CSKP41240 450 aa12.68□□□□□ -0.38
USP1-203ENST00000442679 ARHGAP25P42331 645 aa12.68□□□□□ -0.38
USP1-203ENST00000442679 MRE11P49959 708 aa12.68□□□□□ -0.38
USP1-203ENST00000442679 TCF15Q12870 199 aa12.68□□□□□ -0.38
USP1-203ENST00000442679 MESDQ14696 234 aa12.68□□□□□ -0.38
USP1-203ENST00000442679 TCEAL1Q15170 157 aa12.68□□□□□ -0.38
USP1-203ENST00000442679 CA9Q16790 459 aa12.68□□□□□ -0.38
USP1-203ENST00000442679 BOLA3Q53S33 107 aa12.68□□□□□ -0.38
USP1-203ENST00000442679 PITRM1Q5JRX3 1037 aa12.68□□□□□ -0.38
USP1-203ENST00000442679 EOGTQ5NDL2 527 aa12.68□□□□□ -0.38
USP1-203ENST00000442679 RNF219Q5W0B1 726 aaPredicted RBP12.68□□□□□ -0.38
USP1-203ENST00000442679 TSSK4Q6SA08 328 aa12.68□□□□□ -0.38
USP1-203ENST00000442679 PSTKQ8IV42 348 aaKnown RBP12.68□□□□□ -0.38
USP1-203ENST00000442679 APCDD1Q8J025 514 aa12.68□□□□□ -0.38
USP1-203ENST00000442679 CYB5D2Q8WUJ1 264 aa12.68□□□□□ -0.38
USP1-203ENST00000442679 RFFLQ8WZ73 363 aa12.68□□□□□ -0.38
USP1-203ENST00000442679 TTC17Q96AE7 1141 aa12.68□□□□□ -0.38
USP1-203ENST00000442679 PPP1R9BQ96SB3 815 aa12.68□□□□□ -0.38
USP1-203ENST00000442679 EPAS1Q99814 870 aa12.68□□□□□ -0.38
USP1-203ENST00000442679 FEM1AQ9BSK4 669 aa12.68□□□□□ -0.38
USP1-203ENST00000442679 SNRNP25Q9BV90 132 aaKnown RBP12.68□□□□□ -0.38
USP1-203ENST00000442679 RETREG1Q9H6L5 497 aa12.68□□□□□ -0.38
USP1-203ENST00000442679 ZWILCHQ9H900 591 aa12.68□□□□□ -0.38
USP1-203ENST00000442679 CACNA2D2Q9NY47 1150 aa12.68□□□□□ -0.38
USP1-203ENST00000442679 TFR2Q9UP52 801 aa12.68□□□□□ -0.38
USP1-203ENST00000442679 KMT2EQ8IZD2 1858 aa12.68□□□□□ -0.38
USP1-203ENST00000442679 MIA3Q5JRA6 1907 aa12.67□□□□□ -0.38
USP1-203ENST00000442679 WASH3PC4AMC7 463 aa12.67□□□□□ -0.38
USP1-203ENST00000442679 H0Y858 1186 aa12.67□□□□□ -0.38
USP1-203ENST00000442679 K7ESF4 209 aa12.67□□□□□ -0.38
USP1-203ENST00000442679 MTA2O94776 668 aa12.67□□□□□ -0.38
USP1-203ENST00000442679 ASLP04424 464 aa12.67□□□□□ -0.38
USP1-203ENST00000442679 RHOCP08134 193 aa12.67□□□□□ -0.38
USP1-203ENST00000442679 DLDP09622 509 aaKnown RBP12.67□□□□□ -0.38
USP1-203ENST00000442679 SP9P0CG40 484 aa12.67□□□□□ -0.38
USP1-203ENST00000442679 EPHB2P29323 1055 aa12.67□□□□□ -0.38
USP1-203ENST00000442679 NOP2P46087 812 aaKnown RBP12.67□□□□□ -0.38
USP1-203ENST00000442679 DGKEP52429 567 aa12.67□□□□□ -0.38
USP1-203ENST00000442679 PLK1P53350 603 aa12.67□□□□□ -0.38
USP1-203ENST00000442679 PTPN5P54829 565 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms