RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 RASA2Q15283 850 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 EFHC1Q5JVL4 640 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 GKAP1Q5VSY0 366 aaPredicted RBP7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 PLEKHA7Q6IQ23 1121 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 DRICH1Q6PGQ1 229 aaPredicted RBP7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 SH2D5Q6ZV89 423 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 TDRPQ86YL5 185 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 DENND1CQ8IV53 801 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 GPR65Q8IYL9 337 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 CCDC33Q8N5R6 958 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 FITM2Q8N6M3 262 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 ATP6V0D2Q8N8Y2 350 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 GLIS1Q8NBF1 620 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 PSMG2Q969U7 264 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 APOBEC3GQ9HC16 384 aaKnown RBP7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 POLMQ9NP87 494 aaPredicted RBP7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 MAFFQ9ULX9 164 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 F5H5T6 163 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 ATP5BP06576 529 aaKnown RBP7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 ABHD2P08910 425 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 SRFP11831 508 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 ITIH2P19823 946 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 TAS2R40P59535 323 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 GAD2Q05329 585 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 ZP2Q05996 745 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 FNDC3BQ53EP0 1204 aaKnown RBP7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 DENND2CQ68D51 928 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 SYDE1Q6ZW31 735 aaPredicted RBP7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 CMTM8Q8IZV2 173 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 SCAMP5Q8TAC9 235 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 RMDN2Q96LZ7 410 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 PWWP2AQ96N64 755 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 ZCWPW1Q9H0M4 648 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 C8orf33Q9H7E9 229 aaPredicted RBP7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 GDAP2Q9NXN4 497 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 CLEC1BQ9P126 229 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 PDCD11Q14690 1871 aaKnown RBP7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 FBXO21O94952 628 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 ASMTLO95671 621 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 T-ENOLP0DO92 83 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 SLC2A3P11169 496 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 TAC1P20366 129 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 CXCL12P48061 93 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 DEUP1Q05D60 604 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 RAD51Q06609 339 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 ITKQ08881 620 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 CTC1Q2NKJ3 1217 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 ZC3H12AQ5D1E8 599 aaKnown RBP7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 PPP1R26Q5T8A7 1209 aaPredicted RBP7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 GRAMD4Q6IC98 578 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 ANO7Q6IWH7 933 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 TRPM8Q7Z2W7 1104 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 SLC44A3Q8N4M1 653 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 UBL4BQ8N7F7 174 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 ACDQ96AP0 544 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 CCDC114Q96M63 670 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 PRRX2Q99811 253 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 SLC24A3Q9HC58 644 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 GTSE1Q9NYZ3 720 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 FNDC1Q4ZHG4 1894 aaPredicted RBP7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 TCF4P15884 667 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 RRM1P23921 792 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 HOXA9P31269 272 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 RDXP35241 583 aaKnown RBP7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 TIE1P35590 1138 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 SULT1E1P49888 294 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 YWHAGP61981 247 aaKnown RBP eCLIP7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 ZNF177Q13360 481 aaPredicted RBP7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 RUNX3Q13761 415 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 CAMK1Q14012 370 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 MESDQ14696 234 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 MLF2Q15773 248 aaPredicted RBP7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 FAM78AQ5JUQ0 283 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 DAB2IPQ5VWQ8 1189 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 KATNAL2Q8IYT4 538 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 BBS5Q8N3I7 341 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 ANKRD52Q8NB46 1076 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 CMASQ8NFW8 434 aaPredicted RBP7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 P2RY13Q9BPV8 354 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 DUSP16Q9BY84 665 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 WDR35Q9P2L0 1181 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 SIX4Q9UIU6 781 aa7.6□□□□□ -1.19
CDC42BPA-208ENST00000442054 A0A1W2PQH9 124 aa7.59□□□□□ -1.19
CDC42BPA-208ENST00000442054 GOLGA6L10A6NI86 522 aa7.59□□□□□ -1.19
CDC42BPA-208ENST00000442054 ABLIM1O14639 778 aa7.59□□□□□ -1.19
CDC42BPA-208ENST00000442054 TRDMT1O14717 391 aaKnown RBP7.59□□□□□ -1.19
CDC42BPA-208ENST00000442054 TYROBPO43914 113 aa7.59□□□□□ -1.19
CDC42BPA-208ENST00000442054 FAM155BO75949 473 aa7.59□□□□□ -1.19
CDC42BPA-208ENST00000442054 GLP2RO95838 553 aa7.59□□□□□ -1.19
CDC42BPA-208ENST00000442054 MAN1A1P33908 653 aa7.59□□□□□ -1.19
CDC42BPA-208ENST00000442054 DHPSP49366 369 aaPredicted RBP7.59□□□□□ -1.19
CDC42BPA-208ENST00000442054 RWDD2BP57060 319 aa7.59□□□□□ -1.19
CDC42BPA-208ENST00000442054 KCNJ2P63252 427 aa7.59□□□□□ -1.19
CDC42BPA-208ENST00000442054 PPARDQ03181 441 aa7.59□□□□□ -1.19
CDC42BPA-208ENST00000442054 KRT81Q14533 505 aa7.59□□□□□ -1.19
CDC42BPA-208ENST00000442054 PON2Q15165 354 aa7.59□□□□□ -1.19
CDC42BPA-208ENST00000442054 OASLQ15646 514 aaKnown RBP7.59□□□□□ -1.19
CDC42BPA-208ENST00000442054 LONRF1Q17RB8 773 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms