RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 ZFRQ96KR1 1074 aaKnown RBP19.61■□□□□ 0.73
SNX17-203ENST00000440760 RPRD1AQ96P16 312 aaPredicted RBP19.61■□□□□ 0.73
SNX17-203ENST00000440760 PBX4Q9BYU1 374 aa19.61■□□□□ 0.73
SNX17-203ENST00000440760 EPB41L4BQ9H329 900 aa19.61■□□□□ 0.73
SNX17-203ENST00000440760 SEMA4AQ9H3S1 761 aa19.61■□□□□ 0.73
SNX17-203ENST00000440760 ASB3Q9Y575 518 aa19.61■□□□□ 0.73
SNX17-203ENST00000440760 PCDHA11Q9Y5I1 949 aa19.61■□□□□ 0.73
SNX17-203ENST00000440760 A0A1W2PRU2 124 aa19.61■□□□□ 0.73
SNX17-203ENST00000440760 GOLGA6BA6NDN3 693 aa19.61■□□□□ 0.73
SNX17-203ENST00000440760 METTL18O95568 372 aa19.61■□□□□ 0.73
SNX17-203ENST00000440760 MYL4P12829 197 aa19.61■□□□□ 0.73
SNX17-203ENST00000440760 TACR2P21452 398 aa19.61■□□□□ 0.73
SNX17-203ENST00000440760 HTR7P34969 479 aa19.61■□□□□ 0.73
SNX17-203ENST00000440760 WASHC5Q12768 1159 aa19.61■□□□□ 0.73
SNX17-203ENST00000440760 FAM133BQ5BKY9 247 aaKnown RBP19.61■□□□□ 0.73
SNX17-203ENST00000440760 CFAP58Q5T655 872 aa19.61■□□□□ 0.73
SNX17-203ENST00000440760 LRRC31Q6UY01 552 aa19.61■□□□□ 0.73
SNX17-203ENST00000440760 RBM23Q86U06 439 aaKnown RBP19.61■□□□□ 0.73
SNX17-203ENST00000440760 NLRP14Q86W24 1093 aa19.61■□□□□ 0.73
SNX17-203ENST00000440760 ZCCHC9Q8N567 271 aaKnown RBP19.61■□□□□ 0.73
SNX17-203ENST00000440760 KLF16Q9BXK1 252 aaPredicted RBP19.61■□□□□ 0.73
SNX17-203ENST00000440760 ZYG11BQ9C0D3 744 aa19.61■□□□□ 0.73
SNX17-203ENST00000440760 NKX2-4Q9H2Z4 354 aa19.61■□□□□ 0.73
SNX17-203ENST00000440760 SHOC2Q9UQ13 582 aa19.61■□□□□ 0.73
SNX17-203ENST00000440760 H3BQF6 201 aa19.6■□□□□ 0.73
SNX17-203ENST00000440760 AGPSO00116 658 aa19.6■□□□□ 0.73
SNX17-203ENST00000440760 TRDMT1O14717 391 aaKnown RBP19.6■□□□□ 0.73
SNX17-203ENST00000440760 CLASP2O75122 1294 aaKnown RBP19.6■□□□□ 0.73
SNX17-203ENST00000440760 BANF1O75531 89 aa19.6■□□□□ 0.73
SNX17-203ENST00000440760 PPP3CCP48454 512 aa19.6■□□□□ 0.73
SNX17-203ENST00000440760 NUMBP49757 651 aa19.6■□□□□ 0.73
SNX17-203ENST00000440760 ERVK-21P61565 698 aa19.6■□□□□ 0.73
SNX17-203ENST00000440760 PPIDQ08752 370 aaKnown RBP19.6■□□□□ 0.73
SNX17-203ENST00000440760 ADGRD2Q7Z7M1 963 aa19.6■□□□□ 0.73
SNX17-203ENST00000440760 ELMOD1Q8N336 334 aa19.6■□□□□ 0.73
SNX17-203ENST00000440760 PLD4Q96BZ4 506 aa19.6■□□□□ 0.73
SNX17-203ENST00000440760 HDAC11Q96DB2 347 aa19.6■□□□□ 0.73
SNX17-203ENST00000440760 SLC39A8Q9C0K1 460 aa19.6■□□□□ 0.73
SNX17-203ENST00000440760 CDC42EP4Q9H3Q1 356 aaKnown RBP19.6■□□□□ 0.73
SNX17-203ENST00000440760 TMEM51Q9NW97 253 aa19.6■□□□□ 0.73
SNX17-203ENST00000440760 PLAAQ9Y263 795 aa19.6■□□□□ 0.73
SNX17-203ENST00000440760 IGLV3-10A0A075B6K4 115 aa19.59■□□□□ 0.73
SNX17-203ENST00000440760 A0A0A0MRY4 1105 aa19.59■□□□□ 0.73
SNX17-203ENST00000440760 C5orf60A6NFR6 353 aa19.59■□□□□ 0.73
SNX17-203ENST00000440760 ACSL4O60488 711 aa19.59■□□□□ 0.73
SNX17-203ENST00000440760 GCATO75600 419 aa19.59■□□□□ 0.73
SNX17-203ENST00000440760 CCR2P41597 374 aa19.59■□□□□ 0.73
SNX17-203ENST00000440760 HARS2P49590 506 aaKnown RBP19.59■□□□□ 0.73
SNX17-203ENST00000440760 COG7P83436 770 aa19.59■□□□□ 0.73
SNX17-203ENST00000440760 ZXDBP98169 803 aa19.59■□□□□ 0.73
SNX17-203ENST00000440760 ANKRD20A2Q5SQ80 823 aa19.59■□□□□ 0.73
SNX17-203ENST00000440760 HP1BP3Q5SSJ5 553 aaPredicted RBP19.59■□□□□ 0.73
SNX17-203ENST00000440760 ZNF697Q5TEC3 545 aa19.59■□□□□ 0.73
SNX17-203ENST00000440760 ANKRD20A1Q5TYW2 823 aa19.59■□□□□ 0.73
SNX17-203ENST00000440760 ANKRD20A3Q5VUR7 823 aa19.59■□□□□ 0.73
SNX17-203ENST00000440760 ARHGEF18Q6ZSZ5 1173 aa19.59■□□□□ 0.73
SNX17-203ENST00000440760 LGI2Q8N0V4 545 aa19.59■□□□□ 0.73
SNX17-203ENST00000440760 CFAP52Q8N1V2 620 aa19.59■□□□□ 0.73
SNX17-203ENST00000440760 MAB21L3Q8N8X9 362 aa19.59■□□□□ 0.73
SNX17-203ENST00000440760 UHMK1Q8TAS1 419 aaKnown RBP19.59■□□□□ 0.73
SNX17-203ENST00000440760 GDPD5Q8WTR4 605 aa19.59■□□□□ 0.73
SNX17-203ENST00000440760 SPATA13Q96N96 652 aa19.59■□□□□ 0.73
SNX17-203ENST00000440760 ATXN3LQ9H3M9 355 aa19.59■□□□□ 0.73
SNX17-203ENST00000440760 NOL6Q9H6R4 1146 aaKnown RBP19.59■□□□□ 0.73
SNX17-203ENST00000440760 ETNK1Q9HBU6 452 aa19.59■□□□□ 0.73
SNX17-203ENST00000440760 ASAH2Q9NR71 780 aa19.59■□□□□ 0.73
SNX17-203ENST00000440760 FAM53CQ9NYF3 392 aa19.59■□□□□ 0.73
SNX17-203ENST00000440760 RAD54BQ9Y620 910 aa19.59■□□□□ 0.73
SNX17-203ENST00000440760 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.59■□□□□ 0.73
SNX17-203ENST00000440760 H3BNC9 293 aa19.59■□□□□ 0.73
SNX17-203ENST00000440760 ZBTB17Q13105 803 aa19.59■□□□□ 0.73
SNX17-203ENST00000440760 KCNJ11Q14654 390 aa19.59■□□□□ 0.73
SNX17-203ENST00000440760 FASTKD3Q14CZ7 662 aaKnown RBP19.59■□□□□ 0.73
SNX17-203ENST00000440760 IQCKQ8N0W5 287 aa19.59■□□□□ 0.73
SNX17-203ENST00000440760 ZNF567Q8N184 647 aa19.59■□□□□ 0.73
SNX17-203ENST00000440760 RBM15Q96T37 977 aaKnown RBP eCLIP19.59■□□□□ 0.73
SNX17-203ENST00000440760 CPQQ9Y646 472 aa19.59■□□□□ 0.73
SNX17-203ENST00000440760 F5H5T6 163 aa19.58■□□□□ 0.73
SNX17-203ENST00000440760 NCAM2O15394 837 aa19.58■□□□□ 0.73
SNX17-203ENST00000440760 RHOQP17081 205 aa19.58■□□□□ 0.73
SNX17-203ENST00000440760 MX2P20592 715 aa19.58■□□□□ 0.73
SNX17-203ENST00000440760 SGSHP51688 502 aa19.58■□□□□ 0.73
SNX17-203ENST00000440760 SMAD3P84022 425 aaKnown RBP19.58■□□□□ 0.73
SNX17-203ENST00000440760 SLMAPQ14BN4 828 aa19.58■□□□□ 0.73
SNX17-203ENST00000440760 PABPC1LQ4VXU2 614 aaKnown RBP19.58■□□□□ 0.73
SNX17-203ENST00000440760 PCGF5Q86SE9 256 aa19.58■□□□□ 0.73
SNX17-203ENST00000440760 ATPAF2Q8N5M1 289 aa19.58■□□□□ 0.73
SNX17-203ENST00000440760 ADAMTS19Q8TE59 1207 aa19.58■□□□□ 0.73
SNX17-203ENST00000440760 ARNTL2Q8WYA1 636 aa19.58■□□□□ 0.73
SNX17-203ENST00000440760 MRPS31Q92665 395 aaKnown RBP19.58■□□□□ 0.73
SNX17-203ENST00000440760 PRICKLE1Q96MT3 831 aaPredicted RBP19.58■□□□□ 0.73
SNX17-203ENST00000440760 LRRC4CQ9HCJ2 640 aa19.58■□□□□ 0.73
SNX17-203ENST00000440760 TMEM248Q9NWD8 314 aa19.58■□□□□ 0.73
SNX17-203ENST00000440760 PPARGC1AQ9UBK2 798 aaKnown RBP19.58■□□□□ 0.73
SNX17-203ENST00000440760 WASH4PA8MWX3 477 aa19.57■□□□□ 0.72
SNX17-203ENST00000440760 OLFM2O95897 454 aa19.57■□□□□ 0.72
SNX17-203ENST00000440760 HDCP19113 662 aa19.57■□□□□ 0.72
SNX17-203ENST00000440760 PTPN3P26045 913 aa19.57■□□□□ 0.72
SNX17-203ENST00000440760 SLC11A2P49281 568 aa19.57■□□□□ 0.72
SNX17-203ENST00000440760 PPP2R2DQ66LE6 453 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms