RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 POC1B-GALNT4F8VUJ3 575 aa9.4□□□□□ -0.9
HDAC6-209ENST00000440653 GOLGA8MH3BSY2 632 aa9.4□□□□□ -0.9
HDAC6-209ENST00000440653 M0QYT0 321 aa9.4□□□□□ -0.9
HDAC6-209ENST00000440653 AP3B1O00203 1094 aa9.4□□□□□ -0.9
HDAC6-209ENST00000440653 HCRTO43612 131 aa9.4□□□□□ -0.9
HDAC6-209ENST00000440653 DGKIO75912 1065 aa9.4□□□□□ -0.9
HDAC6-209ENST00000440653 EOMESO95936 686 aa9.4□□□□□ -0.9
HDAC6-209ENST00000440653 GOT1P17174 413 aa9.4□□□□□ -0.9
HDAC6-209ENST00000440653 CA4P22748 312 aa9.4□□□□□ -0.9
HDAC6-209ENST00000440653 ACAT1P24752 427 aaKnown RBP9.4□□□□□ -0.9
HDAC6-209ENST00000440653 CNTFP26441 200 aa9.4□□□□□ -0.9
HDAC6-209ENST00000440653 CD52P31358 61 aa9.4□□□□□ -0.9
HDAC6-209ENST00000440653 ELK3P41970 407 aa9.4□□□□□ -0.9
HDAC6-209ENST00000440653 IFNAR2P48551 515 aa9.4□□□□□ -0.9
HDAC6-209ENST00000440653 SERPINB9P50453 376 aa9.4□□□□□ -0.9
HDAC6-209ENST00000440653 MAP3K7CLP57077 242 aa9.4□□□□□ -0.9
HDAC6-209ENST00000440653 GPX6P59796 221 aa9.4□□□□□ -0.9
HDAC6-209ENST00000440653 TPI1P60174 286 aa9.4□□□□□ -0.9
HDAC6-209ENST00000440653 YWHAGP61981 247 aaKnown RBP eCLIP9.4□□□□□ -0.9
HDAC6-209ENST00000440653 GBE1Q04446 702 aa9.4□□□□□ -0.9
HDAC6-209ENST00000440653 SEMA3BQ13214 749 aa9.4□□□□□ -0.9
HDAC6-209ENST00000440653 PDK4Q16654 411 aa9.4□□□□□ -0.9
HDAC6-209ENST00000440653 KCTD19Q17RG1 926 aaPredicted RBP9.4□□□□□ -0.9
HDAC6-209ENST00000440653 BRMS1LQ5PSV4 323 aa9.4□□□□□ -0.9
HDAC6-209ENST00000440653 FNBP1LQ5T0N5 605 aa9.4□□□□□ -0.9
HDAC6-209ENST00000440653 ARMC3Q5W041 872 aa9.4□□□□□ -0.9
HDAC6-209ENST00000440653 ITPRIPL1Q6GPH6 555 aa9.4□□□□□ -0.9
HDAC6-209ENST00000440653 OVOS1Q6IE37 1185 aa9.4□□□□□ -0.9
HDAC6-209ENST00000440653 KCNT2Q6UVM3 1135 aa9.4□□□□□ -0.9
HDAC6-209ENST00000440653 GLB1LQ6UWU2 654 aa9.4□□□□□ -0.9
HDAC6-209ENST00000440653 PAQR9Q6ZVX9 377 aa9.4□□□□□ -0.9
HDAC6-209ENST00000440653 PIGWQ7Z7B1 504 aa9.4□□□□□ -0.9
HDAC6-209ENST00000440653 FAM131BQ86XD5 332 aa9.4□□□□□ -0.9
HDAC6-209ENST00000440653 ANKMY2Q8IV38 441 aa9.4□□□□□ -0.9
HDAC6-209ENST00000440653 ANKRD42Q8N9B4 389 aa9.4□□□□□ -0.9
HDAC6-209ENST00000440653 GSDMBQ8TAX9 411 aa9.4□□□□□ -0.9
HDAC6-209ENST00000440653 FBF1Q8TES7 1133 aa9.4□□□□□ -0.9
HDAC6-209ENST00000440653 SLC44A1Q8WWI5 657 aa9.4□□□□□ -0.9
HDAC6-209ENST00000440653 APOPT1Q96IL0 206 aa9.4□□□□□ -0.9
HDAC6-209ENST00000440653 MSLNLQ96KJ4 702 aa9.4□□□□□ -0.9
HDAC6-209ENST00000440653 VAT1Q99536 393 aa9.4□□□□□ -0.9
HDAC6-209ENST00000440653 SMOQ99835 787 aa9.4□□□□□ -0.9
HDAC6-209ENST00000440653 WDR83Q9BRX9 315 aaKnown RBP9.4□□□□□ -0.9
HDAC6-209ENST00000440653 KDM4CQ9H3R0 1056 aa9.4□□□□□ -0.9
HDAC6-209ENST00000440653 AGO3Q9H9G7 860 aaKnown RBP9.4□□□□□ -0.9
HDAC6-209ENST00000440653 IGSF9Q9P2J2 1179 aa9.4□□□□□ -0.9
HDAC6-209ENST00000440653 TBK1Q9UHD2 729 aa9.4□□□□□ -0.9
HDAC6-209ENST00000440653 USP15Q9Y4E8 981 aaPredicted RBP9.4□□□□□ -0.9
HDAC6-209ENST00000440653 ZNF638Q14966 1978 aaKnown RBP9.4□□□□□ -0.9
HDAC6-209ENST00000440653 SPEGQ15772 3267 aa9.39□□□□□ -0.91
HDAC6-209ENST00000440653 ZFYVE26Q68DK2 2539 aa9.39□□□□□ -0.91
HDAC6-209ENST00000440653 TCRBV9S1A1TA0A576 114 aa9.39□□□□□ -0.91
HDAC6-209ENST00000440653 DCLK1O15075 740 aa9.39□□□□□ -0.91
HDAC6-209ENST00000440653 FGF10O15520 208 aaPredicted RBP9.39□□□□□ -0.91
HDAC6-209ENST00000440653 TYROBPO43914 113 aa9.39□□□□□ -0.91
HDAC6-209ENST00000440653 SNX3O60493 162 aa9.39□□□□□ -0.91
HDAC6-209ENST00000440653 KRT38O76015 456 aa9.39□□□□□ -0.91
HDAC6-209ENST00000440653 CSPG5O95196 566 aa9.39□□□□□ -0.91
HDAC6-209ENST00000440653 ASMTLO95671 621 aa9.39□□□□□ -0.91
HDAC6-209ENST00000440653 LMNAP02545 664 aaKnown RBP9.39□□□□□ -0.91
HDAC6-209ENST00000440653 APOEP02649 317 aa9.39□□□□□ -0.91
HDAC6-209ENST00000440653 APRTP07741 180 aa9.39□□□□□ -0.91
HDAC6-209ENST00000440653 TFE3P19532 575 aaPredicted RBP9.39□□□□□ -0.91
HDAC6-209ENST00000440653 PRKCHP24723 683 aa9.39□□□□□ -0.91
HDAC6-209ENST00000440653 ATXN1P54253 815 aaKnown RBP9.39□□□□□ -0.91
HDAC6-209ENST00000440653 COG7P83436 770 aa9.39□□□□□ -0.91
HDAC6-209ENST00000440653 SEPT7Q16181 437 aaKnown RBP9.39□□□□□ -0.91
HDAC6-209ENST00000440653 DBN1Q16643 649 aa9.39□□□□□ -0.91
HDAC6-209ENST00000440653 QPCTQ16769 361 aa9.39□□□□□ -0.91
HDAC6-209ENST00000440653 MSS51Q4VC12 460 aa9.39□□□□□ -0.91
HDAC6-209ENST00000440653 LACTB2Q53H82 288 aaPredicted RBP9.39□□□□□ -0.91
HDAC6-209ENST00000440653 RAB6CQ53S08 254 aa9.39□□□□□ -0.91
HDAC6-209ENST00000440653 STEAP4Q687X5 459 aa9.39□□□□□ -0.91
HDAC6-209ENST00000440653 PM20D1Q6GTS8 502 aa9.39□□□□□ -0.91
HDAC6-209ENST00000440653 FAM171BQ6P995 826 aa9.39□□□□□ -0.91
HDAC6-209ENST00000440653 DCLRE1AQ6PJP8 1040 aa9.39□□□□□ -0.91
HDAC6-209ENST00000440653 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.39□□□□□ -0.91
HDAC6-209ENST00000440653 C3orf62Q6ZUJ4 267 aa9.39□□□□□ -0.91
HDAC6-209ENST00000440653 CYS1Q717R9 158 aa9.39□□□□□ -0.91
HDAC6-209ENST00000440653 SPATA21Q7Z572 469 aa9.39□□□□□ -0.91
HDAC6-209ENST00000440653 ZNF598Q86UK7 904 aaKnown RBP9.39□□□□□ -0.91
HDAC6-209ENST00000440653 SLC26A11Q86WA9 606 aa9.39□□□□□ -0.91
HDAC6-209ENST00000440653 LRRC6Q86X45 466 aa9.39□□□□□ -0.91
HDAC6-209ENST00000440653 CHSY1Q86X52 802 aa9.39□□□□□ -0.91
HDAC6-209ENST00000440653 ECHDC2Q86YB7 292 aa9.39□□□□□ -0.91
HDAC6-209ENST00000440653 LRRC34Q8IZ02 419 aa9.39□□□□□ -0.91
HDAC6-209ENST00000440653 C3orf58Q8NDZ4 430 aa9.39□□□□□ -0.91
HDAC6-209ENST00000440653 SLC7A14Q8TBB6 771 aa9.39□□□□□ -0.91
HDAC6-209ENST00000440653 DCAKDQ8WVC6 231 aa9.39□□□□□ -0.91
HDAC6-209ENST00000440653 LPPQ93052 612 aa9.39□□□□□ -0.91
HDAC6-209ENST00000440653 HDAC11Q96DB2 347 aa9.39□□□□□ -0.91
HDAC6-209ENST00000440653 FUBP3Q96I24 572 aaKnown RBP eCLIP9.39□□□□□ -0.91
HDAC6-209ENST00000440653 PKMYT1Q99640 499 aa9.39□□□□□ -0.91
HDAC6-209ENST00000440653 ADAM2Q99965 735 aa9.39□□□□□ -0.91
HDAC6-209ENST00000440653 RAB6CQ9H0N0 254 aa9.39□□□□□ -0.91
HDAC6-209ENST00000440653 RABEP2Q9H5N1 569 aa9.39□□□□□ -0.91
HDAC6-209ENST00000440653 FNIP2Q9P278 1114 aa9.39□□□□□ -0.91
HDAC6-209ENST00000440653 KANSL3Q9P2N6 904 aa9.39□□□□□ -0.91
HDAC6-209ENST00000440653 ZC3H7BQ9UGR2 993 aaKnown RBP9.39□□□□□ -0.91
HDAC6-209ENST00000440653 TTLL3Q9Y4R7 772 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms