RNA–Protein interactions for RNA: ENST00000440126.7

APP-209, Transcript of amyloid beta precursor protein, humanhuman

TSL 2 BASIC

Gene APP, Length 2,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-209ENST00000440126 MRGBPQ9NV56 204 aa8.12□□□□□ -1.11
APP-209ENST00000440126 MARCOQ9UEW3 520 aaPredicted RBP8.12□□□□□ -1.11
APP-209ENST00000440126 PHTF1Q9UMS5 762 aa8.12□□□□□ -1.11
APP-209ENST00000440126 STK38LQ9Y2H1 464 aa8.12□□□□□ -1.11
APP-209ENST00000440126 A8MUI8 341 aa8.11□□□□□ -1.11
APP-209ENST00000440126 E7ESA3 106 aa8.11□□□□□ -1.11
APP-209ENST00000440126 TYROBPO43914 113 aa8.11□□□□□ -1.11
APP-209ENST00000440126 LPXNO60711 386 aa8.11□□□□□ -1.11
APP-209ENST00000440126 ADAMTS4O75173 837 aa8.11□□□□□ -1.11
APP-209ENST00000440126 TRPA1O75762 1119 aa8.11□□□□□ -1.11
APP-209ENST00000440126 BGNP21810 368 aa8.11□□□□□ -1.11
APP-209ENST00000440126 LRPAP1P30533 357 aa8.11□□□□□ -1.11
APP-209ENST00000440126 TRPC1P48995 793 aa8.11□□□□□ -1.11
APP-209ENST00000440126 GJA9P57773 515 aa8.11□□□□□ -1.11
APP-209ENST00000440126 DAOAP59103 153 aa8.11□□□□□ -1.11
APP-209ENST00000440126 UPP1Q16831 310 aa8.11□□□□□ -1.11
APP-209ENST00000440126 C16orf46Q6P387 395 aa8.11□□□□□ -1.11
APP-209ENST00000440126 ZNF449Q6P9G9 518 aa8.11□□□□□ -1.11
APP-209ENST00000440126 ZCCHC23Q6ZST2 131 aa8.11□□□□□ -1.11
APP-209ENST00000440126 PID1Q7Z2X4 250 aa8.11□□□□□ -1.11
APP-209ENST00000440126 RSPH3Q86UC2 560 aa8.11□□□□□ -1.11
APP-209ENST00000440126 ECHDC2Q86YB7 292 aa8.11□□□□□ -1.11
APP-209ENST00000440126 TTC9BQ8N6N2 239 aa8.11□□□□□ -1.11
APP-209ENST00000440126 LRRC8CQ8TDW0 803 aa8.11□□□□□ -1.11
APP-209ENST00000440126 DENND1AQ8TEH3 1009 aa8.11□□□□□ -1.11
APP-209ENST00000440126 PGBD4Q96DM1 585 aa8.11□□□□□ -1.11
APP-209ENST00000440126 PRR11Q96HE9 360 aaPredicted RBP8.11□□□□□ -1.11
APP-209ENST00000440126 HSFY1Q96LI6 401 aa8.11□□□□□ -1.11
APP-209ENST00000440126 CEP295NLQ96MC4 621 aa8.11□□□□□ -1.11
APP-209ENST00000440126 TMEM237Q96Q45 408 aa8.11□□□□□ -1.11
APP-209ENST00000440126 NPY6RQ99463 290 aa8.11□□□□□ -1.11
APP-209ENST00000440126 TKTL2Q9H0I9 626 aa8.11□□□□□ -1.11
APP-209ENST00000440126 SPC25Q9HBM1 224 aa8.11□□□□□ -1.11
APP-209ENST00000440126 ABI2Q9NYB9 513 aaPredicted RBP8.11□□□□□ -1.11
APP-209ENST00000440126 DNAJB4Q9UDY4 337 aa8.11□□□□□ -1.11
APP-209ENST00000440126 TMCO1Q9UM00 188 aa8.11□□□□□ -1.11
APP-209ENST00000440126 PSAT1Q9Y617 370 aa8.11□□□□□ -1.11
APP-209ENST00000440126 USP3Q9Y6I4 520 aa8.11□□□□□ -1.11
APP-209ENST00000440126 NUMBLQ9Y6R0 609 aa8.11□□□□□ -1.11
APP-209ENST00000440126 NT5C1B-RDH14C9J2C7 533 aa8.11□□□□□ -1.11
APP-209ENST00000440126 GABRDO14764 452 aa8.11□□□□□ -1.11
APP-209ENST00000440126 KITP10721 976 aa8.11□□□□□ -1.11
APP-209ENST00000440126 TUFMP49411 452 aaKnown RBP8.11□□□□□ -1.11
APP-209ENST00000440126 RFX8Q6ZV50 586 aa8.11□□□□□ -1.11
APP-209ENST00000440126 TAC4Q86UU9 113 aa8.11□□□□□ -1.11
APP-209ENST00000440126 CDKL3Q8IVW4 592 aaPredicted RBP8.11□□□□□ -1.11
APP-209ENST00000440126 ZNF567Q8N184 647 aa8.11□□□□□ -1.11
APP-209ENST00000440126 RFWD2Q8NHY2 731 aa8.11□□□□□ -1.11
APP-209ENST00000440126 STK32AQ8WU08 396 aa8.11□□□□□ -1.11
APP-209ENST00000440126 MZB1Q8WU39 189 aa8.11□□□□□ -1.11
APP-209ENST00000440126 MAGEB18Q96M61 343 aa8.11□□□□□ -1.11
APP-209ENST00000440126 CYTH2Q99418 400 aa8.11□□□□□ -1.11
APP-209ENST00000440126 NSRP1Q9H0G5 558 aaKnown RBP8.11□□□□□ -1.11
APP-209ENST00000440126 KLHL8Q9P2G9 620 aaPredicted RBP8.11□□□□□ -1.11
APP-209ENST00000440126 PRRC2BQ5JSZ5 2229 aaKnown RBP8.11□□□□□ -1.11
APP-209ENST00000440126 A0A0G2JND7 137 aa8.11□□□□□ -1.11
APP-209ENST00000440126 BCLAF3A2AJT9 711 aaKnown RBP8.11□□□□□ -1.11
APP-209ENST00000440126 SRRM3A6NNA2 597 aaPredicted RBP8.11□□□□□ -1.11
APP-209ENST00000440126 BOLA2-SMG1P6H3BVE0 249 aa8.11□□□□□ -1.11
APP-209ENST00000440126 CHADO15335 359 aa8.11□□□□□ -1.11
APP-209ENST00000440126 SEPT4O43236 478 aa8.11□□□□□ -1.11
APP-209ENST00000440126 CA12O43570 354 aa8.11□□□□□ -1.11
APP-209ENST00000440126 TIMM44O43615 452 aa8.11□□□□□ -1.11
APP-209ENST00000440126 ATP9BO43861 1147 aa8.11□□□□□ -1.11
APP-209ENST00000440126 DAB1O75553 588 aa8.11□□□□□ -1.11
APP-209ENST00000440126 DDHD2O94830 711 aa8.11□□□□□ -1.11
APP-209ENST00000440126 LTFP02788 710 aa8.11□□□□□ -1.11
APP-209ENST00000440126 ERVK-10P10266 1014 aa8.11□□□□□ -1.11
APP-209ENST00000440126 EPHB2P29323 1055 aa8.11□□□□□ -1.11
APP-209ENST00000440126 HOXC8P31273 242 aa8.11□□□□□ -1.11
APP-209ENST00000440126 GRK4P32298 578 aa8.11□□□□□ -1.11
APP-209ENST00000440126 NOS2P35228 1153 aa8.11□□□□□ -1.11
APP-209ENST00000440126 ACADSBP45954 432 aa8.11□□□□□ -1.11
APP-209ENST00000440126 TPI1P60174 286 aa8.11□□□□□ -1.11
APP-209ENST00000440126 CBX3Q13185 183 aa8.11□□□□□ -1.11
APP-209ENST00000440126 ITGA7Q13683 1181 aa8.11□□□□□ -1.11
APP-209ENST00000440126 DDR2Q16832 855 aa8.11□□□□□ -1.11
APP-209ENST00000440126 ADGRD1Q6QNK2 874 aa8.11□□□□□ -1.11
APP-209ENST00000440126 CD300LGQ6UXG3 332 aa8.11□□□□□ -1.11
APP-209ENST00000440126 OTOAQ7RTW8 1153 aa8.11□□□□□ -1.11
APP-209ENST00000440126 OR52K1Q8NGK4 314 aa8.11□□□□□ -1.11
APP-209ENST00000440126 CD99L2Q8TCZ2 262 aa8.11□□□□□ -1.11
APP-209ENST00000440126 AGAP11Q8TF27 550 aa8.11□□□□□ -1.11
APP-209ENST00000440126 MOCOSQ96EN8 888 aa8.11□□□□□ -1.11
APP-209ENST00000440126 QKIQ96PU8 341 aaKnown RBP eCLIP8.11□□□□□ -1.113e-8■■■■■ 27.1
APP-209ENST00000440126 FOXP3Q9BZS1 431 aa8.11□□□□□ -1.11
APP-209ENST00000440126 UNKQ9C0B0 810 aaKnown RBP8.11□□□□□ -1.11
APP-209ENST00000440126 ATXN3LQ9H3M9 355 aa8.11□□□□□ -1.11
APP-209ENST00000440126 WDR6Q9NNW5 1121 aaKnown RBP8.11□□□□□ -1.11
APP-209ENST00000440126 SYBUQ9NX95 663 aa8.11□□□□□ -1.11
APP-209ENST00000440126 TDRD15B5MCY1 1934 aaKnown RBP8.1□□□□□ -1.11
APP-209ENST00000440126 CDH23Q9H251 3354 aa8.1□□□□□ -1.11
APP-209ENST00000440126 TTC24A2A3L6 582 aaPredicted RBP8.1□□□□□ -1.11
APP-209ENST00000440126 DFFAO00273 331 aa8.1□□□□□ -1.11
APP-209ENST00000440126 SUPT3HO75486 399 aa8.1□□□□□ -1.11
APP-209ENST00000440126 SUN1O94901 812 aa8.1□□□□□ -1.11
APP-209ENST00000440126 SAT1P21673 171 aa8.1□□□□□ -1.11
APP-209ENST00000440126 ADRA1BP35368 520 aa8.1□□□□□ -1.11
APP-209ENST00000440126 GRIK1P39086 918 aa8.1□□□□□ -1.11
APP-209ENST00000440126 OR1G1P47890 313 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms