RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 CHI3L2Q15782 390 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 UAP1L1Q3KQV9 507 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 NLRP9Q7RTR0 991 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 EXOC2Q96KP1 924 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 BBS4Q96RK4 519 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 THUMPD3Q9BV44 507 aaKnown RBP12.35□□□□□ -0.43
NEK1-201ENST00000439128 STARD13Q9Y3M8 1113 aa12.35□□□□□ -0.43
NEK1-201ENST00000439128 SMIM28A0A1B0GU29 152 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 ARL5CA6NH57 179 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 SLC8A1P32418 973 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 CLCNKBP51801 687 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 FUT11Q495W5 492 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 KHDRBS2Q5VWX1 349 aaKnown RBP12.34□□□□□ -0.43
NEK1-201ENST00000439128 ANKRD52Q8NB46 1076 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 OR6K2Q8NGY2 324 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 RERGQ96A58 199 aaPredicted RBP12.34□□□□□ -0.43
NEK1-201ENST00000439128 ZBTB10Q96DT7 871 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 RBBP8Q99708 897 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 THEGQ9P2T0 379 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 V9GYQ6 96 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 ROBO1Q9Y6N7 1651 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 CYP3A7-CYP3A51PA0A087WV96 503 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 CTPS1P17812 591 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 FSHRP23945 695 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 CYP3A7P24462 503 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 NRIP1P48552 1158 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 MCL1Q07820 350 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 MPP3Q13368 585 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 TJAP1Q5JTD0 557 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 SH3BP5LQ7L8J4 393 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 DNAAF5Q86Y56 855 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 VPS50Q96JG6 964 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 INPP4AQ96PE3 977 aaPredicted RBP12.34□□□□□ -0.43
NEK1-201ENST00000439128 PRMT1Q99873 361 aaKnown RBP12.34□□□□□ -0.43
NEK1-201ENST00000439128 GTPBP2Q9BX10 602 aaKnown RBP12.34□□□□□ -0.43
NEK1-201ENST00000439128 NPHS2Q9NP85 383 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 GMIPQ9P107 970 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 PPIEQ9UNP9 301 aaKnown RBP12.34□□□□□ -0.43
NEK1-201ENST00000439128 LOC102724159A0A0B4J2E5 919 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 ABHD14A-ACY1A0A1B0GW23 586 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 RNF103O00237 685 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 ADRB2P07550 413 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 ABCB1P08183 1280 aaPredicted RBP12.34□□□□□ -0.43
NEK1-201ENST00000439128 ANXA5P08758 320 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 GTF2BQ00403 316 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 PWP2Q15269 919 aaKnown RBP12.34□□□□□ -0.43
NEK1-201ENST00000439128 C15orf59Q2T9L4 293 aaPredicted RBP12.34□□□□□ -0.43
NEK1-201ENST00000439128 CRTC3Q6UUV7 619 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 DSELQ8IZU8 1212 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 TRIML2Q8N7C3 387 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 OSGEPQ9NPF4 335 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 GID8Q9NWU2 228 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 NR2E1Q9Y466 385 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 CORO1AP31146 461 aaKnown RBP12.34□□□□□ -0.43
NEK1-201ENST00000439128 ZNF571Q7Z3V5 609 aaPredicted RBP12.34□□□□□ -0.43
NEK1-201ENST00000439128 MON1AQ86VX9 555 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 PARGQ86W56 976 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 CCDC126Q96EE4 140 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 HSFY1Q96LI6 401 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 ECSITQ9BQ95 431 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 SH3BP4Q9P0V3 963 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 ZNF112Q9UJU3 913 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 SLC45A1Q9Y2W3 748 aa12.34□□□□□ -0.43
NEK1-201ENST00000439128 LRRC72A6NJI9 287 aa12.33□□□□□ -0.43
NEK1-201ENST00000439128 ZNF862O60290 1169 aa12.33□□□□□ -0.43
NEK1-201ENST00000439128 EOMESO95936 686 aa12.33□□□□□ -0.43
NEK1-201ENST00000439128 CALCAP01258 141 aa12.33□□□□□ -0.43
NEK1-201ENST00000439128 MIPP30301 263 aa12.33□□□□□ -0.43
NEK1-201ENST00000439128 CCR4P51679 360 aa12.33□□□□□ -0.43
NEK1-201ENST00000439128 NME5P56597 212 aa12.33□□□□□ -0.43
NEK1-201ENST00000439128 CNGA2Q16280 664 aa12.33□□□□□ -0.43
NEK1-201ENST00000439128 CRY1Q16526 586 aa12.33□□□□□ -0.43
NEK1-201ENST00000439128 HSP90AA5PQ58FG0 334 aa12.33□□□□□ -0.43
NEK1-201ENST00000439128 RAD9BQ6WBX8 426 aa12.33□□□□□ -0.43
NEK1-201ENST00000439128 REPS1Q96D71 796 aa12.33□□□□□ -0.43
NEK1-201ENST00000439128 WDR24Q96S15 920 aa12.33□□□□□ -0.43
NEK1-201ENST00000439128 ELOVL2Q9NXB9 296 aa12.33□□□□□ -0.43
NEK1-201ENST00000439128 C1orf232A0A0U1RR37 186 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 TRPC5OSA6NMA1 111 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 HSPA14Q0VDF9 509 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 CYP51A1Q16850 503 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 RASIP1Q5U651 963 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 RSPH9Q9H1X1 276 aaPredicted RBP12.33□□□□□ -0.44
NEK1-201ENST00000439128 PPCSQ9HAB8 311 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 ANKDD1BA6NHY2 528 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 H0Y3Z8 333 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 RASGRP1O95267 797 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 RBP1P09455 135 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 ALPPL2P10696 532 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 IMPDH2P12268 514 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 CD151P48509 253 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 NR2C2P49116 596 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 ALLCQ8N6M5 410 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 C12orf29Q8N999 325 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 HAS1Q92839 578 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 USP7Q93009 1102 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 ATP6V1G3Q96LB4 118 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 ERP44Q9BS26 406 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 EIF2AQ9BY44 585 aaKnown RBP12.33□□□□□ -0.44
NEK1-201ENST00000439128 TMPRSS4Q9NRS4 437 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms