RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 ARF4P18085 180 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 AMY2BP19961 511 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 CCNA2P20248 432 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 TNFRSF8P28908 595 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 GDI1P31150 447 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 BMPR1AP36894 532 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 RABIFP47224 123 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 AMPHP49418 695 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 NT5C2P49902 561 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 ETV1P50549 477 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 HSD17B4P51659 736 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 LUMP51884 338 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 POLE2P56282 527 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 ACTR1AP61163 376 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 KCNJ10P78508 379 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 RELQ04864 619 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 DEUP1Q05D60 604 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 RUNX1T1Q06455 604 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 KIF5AQ12840 1032 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 ITGA7Q13683 1181 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 TNFAIP1Q13829 316 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 SEC23BQ15437 767 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 GPR68Q15743 365 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 ZNF628Q5EBL2 1059 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 SPDYCQ5MJ68 293 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 LY6G5CQ5SRR4 150 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 ZBTB41Q5SVQ8 909 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 PLEKHS1Q5SXH7 462 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 CCDC122Q5T0U0 273 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 CYP4A22Q5TCH4 519 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 THEMIS2Q5TEJ8 643 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 FAXCQ5TGI0 409 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 RRAGBQ5VZM2 374 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 PM20D1Q6GTS8 502 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 DRICH1Q6PGQ1 229 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 SYCE2Q6PIF2 218 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 CYP20A1Q6UW02 462 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 SUSD1Q6UWL2 747 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 PET117Q6UWS5 81 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 ISLR2Q6UXK2 745 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 ZYG11AQ6WRX3 759 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 USP49Q70CQ1 688 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 RRAGAQ7L523 313 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 OTOAQ7RTW8 1153 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 TMEM200AQ86VY9 491 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 GATAD2AQ86YP4 633 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 TUSC5Q8IXB3 177 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 PEX5LQ8IYB4 626 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 MAML2Q8IZL2 1156 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 MYOCDQ8IZQ8 938 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 WDTC1Q8N5D0 677 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 ANKRD53Q8N9V6 530 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 CNNM3Q8NE01 707 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 OR6J1Q8NGC5 347 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 OR56B2PQ8NGI1 322 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 OR6Y1Q8NGX8 325 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 KIF18AQ8NI77 898 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 METTL6Q8TCB7 284 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 DPF2Q92785 391 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 GCDHQ92947 438 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 MR1Q95460 341 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 HDAC10Q969S8 669 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 MTFMTQ96DP5 389 aaKnown RBP3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 CYFIP2Q96F07 1278 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 LRRC46Q96FV0 321 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 APOPT1Q96IL0 206 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 FER1L6-AS2Q96M78 137 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 ABHD1Q96SE0 405 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 TCF25Q9BQ70 676 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 MLST8Q9BVC4 326 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 APOL6Q9BWW8 343 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 INTS2Q9H0H0 1204 aaKnown RBP3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 ISCUQ9H1K1 167 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 MRPL44Q9H9J2 332 aaKnown RBP3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 DDX4Q9NQI0 724 aaKnown RBP3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 SIRT3Q9NTG7 399 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 SACM1LQ9NTJ5 587 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 LMBRD1Q9NUN5 540 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 ANO10Q9NW15 660 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 HCFC1R1Q9NWW0 138 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 NMRK1Q9NWW6 199 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 NDUFAF4Q9P032 175 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 FETUBQ9UGM5 382 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 IL19Q9UHD0 177 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 MAGEL2Q9UJ55 1249 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 DNAJC16Q9Y2G8 782 aa3.82□□□□□ -1.8
HMGB1P12-201ENST00000438594 UNC13AQ9UPW8 1703 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 ZCCHC6Q5VYS8 1495 aaKnown RBP3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 BRD4O60885 1362 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 XDHP47989 1333 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 TTC21BQ7Z4L5 1316 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 IGSF1Q8N6C5 1336 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 A0A087WZ62 844 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 RNF103-CHMP3A0A140T963 221 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 hCG_1809904A0A1W2PP81 198 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 A0A1W2PPE2 198 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 A0A1W2PR64 198 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 A0A1W2PRV1 198 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 PRSS38A1L453 326 aa3.81□□□□□ -1.8
HMGB1P12-201ENST00000438594 PMS2P1A4D2B8 440 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms