RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 PEPDP12955 493 aa4.09□□□□□ -1.75
TRAPPC13-204ENST00000438419 ST6GAL1P15907 406 aa4.09□□□□□ -1.75
TRAPPC13-204ENST00000438419 HOXA7P31268 230 aaPredicted RBP4.09□□□□□ -1.75
TRAPPC13-204ENST00000438419 ARHGAP25P42331 645 aa4.09□□□□□ -1.75
TRAPPC13-204ENST00000438419 RBM5P52756 815 aaKnown RBP eCLIP4.09□□□□□ -1.75
TRAPPC13-204ENST00000438419 RPS13P62277 151 aaKnown RBP4.09□□□□□ -1.75
TRAPPC13-204ENST00000438419 SHC2P98077 582 aa4.09□□□□□ -1.75
TRAPPC13-204ENST00000438419 CFHR1Q03591 330 aa4.09□□□□□ -1.75
TRAPPC13-204ENST00000438419 GPR162Q16538 588 aa4.09□□□□□ -1.75
TRAPPC13-204ENST00000438419 SLC9C1Q4G0N8 1177 aa4.09□□□□□ -1.75
TRAPPC13-204ENST00000438419 FBXO47Q5MNV8 452 aa4.09□□□□□ -1.75
TRAPPC13-204ENST00000438419 SLC2A7Q6PXP3 512 aa4.09□□□□□ -1.75
TRAPPC13-204ENST00000438419 SYT13Q7L8C5 426 aa4.09□□□□□ -1.75
TRAPPC13-204ENST00000438419 RASGRP2Q7LDG7 609 aa4.09□□□□□ -1.75
TRAPPC13-204ENST00000438419 BHLHA9Q7RTU4 235 aa4.09□□□□□ -1.75
TRAPPC13-204ENST00000438419 ANKS1BQ7Z6G8 1248 aa4.09□□□□□ -1.75
TRAPPC13-204ENST00000438419 C2CD5Q86YS7 1000 aa4.09□□□□□ -1.75
TRAPPC13-204ENST00000438419 CNGA4Q8IV77 575 aa4.09□□□□□ -1.75
TRAPPC13-204ENST00000438419 TMEM57Q8N5G2 664 aa4.09□□□□□ -1.75
TRAPPC13-204ENST00000438419 PTGR2Q8N8N7 351 aaPredicted RBP4.09□□□□□ -1.75
TRAPPC13-204ENST00000438419 OR52N4Q8NGI2 321 aa4.09□□□□□ -1.75
TRAPPC13-204ENST00000438419 CSGALNACT1Q8TDX6 532 aa4.09□□□□□ -1.75
TRAPPC13-204ENST00000438419 AFG1LQ8WV93 481 aa4.09□□□□□ -1.75
TRAPPC13-204ENST00000438419 GCC1Q96CN9 775 aa4.09□□□□□ -1.75
TRAPPC13-204ENST00000438419 ZSCAN31Q96LW9 406 aaPredicted RBP4.09□□□□□ -1.75
TRAPPC13-204ENST00000438419 NAP1L4Q99733 375 aaKnown RBP4.09□□□□□ -1.75
TRAPPC13-204ENST00000438419 PRSS22Q9GZN4 317 aa4.09□□□□□ -1.75
TRAPPC13-204ENST00000438419 MLXIPLQ9NP71 852 aa4.09□□□□□ -1.75
TRAPPC13-204ENST00000438419 RRN3Q9NYV6 651 aa4.09□□□□□ -1.75
TRAPPC13-204ENST00000438419 C9orf78Q9NZ63 289 aaPredicted RBP4.09□□□□□ -1.75
TRAPPC13-204ENST00000438419 IPO11Q9UI26 975 aaKnown RBP4.09□□□□□ -1.75
TRAPPC13-204ENST00000438419 FEM1BQ9UK73 627 aa4.09□□□□□ -1.75
TRAPPC13-204ENST00000438419 SLC22A23A1A5C7 686 aa4.08□□□□□ -1.76
TRAPPC13-204ENST00000438419 C2CD4BA6NLJ0 364 aa4.08□□□□□ -1.76
TRAPPC13-204ENST00000438419 E5RJQ4 531 aa4.08□□□□□ -1.76
TRAPPC13-204ENST00000438419 INO80B-WBP1J3KQ70 363 aa4.08□□□□□ -1.76
TRAPPC13-204ENST00000438419 GRM8O00222 908 aa4.08□□□□□ -1.76
TRAPPC13-204ENST00000438419 WDHD1O75717 1129 aaPredicted RBP4.08□□□□□ -1.76
TRAPPC13-204ENST00000438419 CYP21A2P08686 494 aa4.08□□□□□ -1.76
TRAPPC13-204ENST00000438419 B4GALNT1Q00973 533 aa4.08□□□□□ -1.76
TRAPPC13-204ENST00000438419 POU5F1BQ06416 359 aa4.08□□□□□ -1.76
TRAPPC13-204ENST00000438419 PDCLQ13371 301 aa4.08□□□□□ -1.76
TRAPPC13-204ENST00000438419 ALFQ53S48 1182 aa4.08□□□□□ -1.76
TRAPPC13-204ENST00000438419 LIPMQ5VYY2 423 aa4.08□□□□□ -1.76
TRAPPC13-204ENST00000438419 MORN5Q5VZ52 161 aa4.08□□□□□ -1.76
TRAPPC13-204ENST00000438419 C1QL2Q7Z5L3 287 aa4.08□□□□□ -1.76
TRAPPC13-204ENST00000438419 PAQR4Q8N4S7 273 aaPredicted RBP4.08□□□□□ -1.76
TRAPPC13-204ENST00000438419 ATP2A3Q93084 1043 aa4.08□□□□□ -1.76
TRAPPC13-204ENST00000438419 ARRDC3Q96B67 414 aa4.08□□□□□ -1.76
TRAPPC13-204ENST00000438419 KTI12Q96EK9 354 aaPredicted RBP4.08□□□□□ -1.76
TRAPPC13-204ENST00000438419 ZNF778Q96MU6 729 aa4.08□□□□□ -1.76
TRAPPC13-204ENST00000438419 PYM1Q9BRP8 204 aaKnown RBP4.08□□□□□ -1.76
TRAPPC13-204ENST00000438419 C1QTNF7Q9BXJ2 289 aa4.08□□□□□ -1.76
TRAPPC13-204ENST00000438419 OSBPL5Q9H0X9 879 aaPredicted RBP4.08□□□□□ -1.76
TRAPPC13-204ENST00000438419 ZNF70Q9UC06 446 aaPredicted RBP4.08□□□□□ -1.76
TRAPPC13-204ENST00000438419 SLC8A2Q9UPR5 921 aa4.08□□□□□ -1.76
TRAPPC13-204ENST00000438419 DERAQ9Y315 318 aa4.08□□□□□ -1.76
TRAPPC13-204ENST00000438419 ZNF335Q9H4Z2 1342 aaPredicted RBP4.07□□□□□ -1.76
TRAPPC13-204ENST00000438419 KCNU1A8MYU2 1149 aa4.07□□□□□ -1.76
TRAPPC13-204ENST00000438419 B9A039 149 aa4.07□□□□□ -1.76
TRAPPC13-204ENST00000438419 MCIDASD6RGH6 385 aa4.07□□□□□ -1.76
TRAPPC13-204ENST00000438419 EIF3FO00303 357 aaPredicted RBP4.07□□□□□ -1.76
TRAPPC13-204ENST00000438419 CHN1P15882 459 aa4.07□□□□□ -1.76
TRAPPC13-204ENST00000438419 PNPLA4P41247 253 aa4.07□□□□□ -1.76
TRAPPC13-204ENST00000438419 OAZ1P54368 228 aa4.07□□□□□ -1.76
TRAPPC13-204ENST00000438419 ADPRHP54922 357 aa4.07□□□□□ -1.76
TRAPPC13-204ENST00000438419 ID2Q02363 134 aa4.07□□□□□ -1.76
TRAPPC13-204ENST00000438419 CDK18Q07002 472 aa4.07□□□□□ -1.76
TRAPPC13-204ENST00000438419 STIM1Q13586 685 aa4.07□□□□□ -1.76
TRAPPC13-204ENST00000438419 KLF9Q13886 244 aaPredicted RBP4.07□□□□□ -1.76
TRAPPC13-204ENST00000438419 TAF12Q16514 161 aa4.07□□□□□ -1.76
TRAPPC13-204ENST00000438419 EARS2Q5JPH6 523 aaKnown RBP4.07□□□□□ -1.76
TRAPPC13-204ENST00000438419 LRIG3Q6UXM1 1119 aa4.07□□□□□ -1.76
TRAPPC13-204ENST00000438419 SYNE3Q6ZMZ3 975 aa4.07□□□□□ -1.76
TRAPPC13-204ENST00000438419 DEF8Q6ZN54 512 aa4.07□□□□□ -1.76
TRAPPC13-204ENST00000438419 FAM57BQ71RH2 274 aa4.07□□□□□ -1.76
TRAPPC13-204ENST00000438419 EXD3Q8N9H8 876 aa4.07□□□□□ -1.76
TRAPPC13-204ENST00000438419 SIGLEC11Q96RL6 698 aa4.07□□□□□ -1.76
TRAPPC13-204ENST00000438419 ZNF347Q96SE7 839 aa4.07□□□□□ -1.76
TRAPPC13-204ENST00000438419 CHODLQ9H9P2 273 aa4.07□□□□□ -1.76
TRAPPC13-204ENST00000438419 NOD2Q9HC29 1040 aa4.07□□□□□ -1.76
TRAPPC13-204ENST00000438419 MTMR4Q9NYA4 1195 aa4.07□□□□□ -1.76
TRAPPC13-204ENST00000438419 RRP7AQ9Y3A4 280 aaKnown RBP4.07□□□□□ -1.76
TRAPPC13-204ENST00000438419 LMTK3Q96Q04 1460 aa4.07□□□□□ -1.76
TRAPPC13-204ENST00000438419 SAC3D1A6NKF1 404 aa4.06□□□□□ -1.76
TRAPPC13-204ENST00000438419 F8W810 466 aa4.06□□□□□ -1.76
TRAPPC13-204ENST00000438419 AGR2O95994 175 aa4.06□□□□□ -1.76
TRAPPC13-204ENST00000438419 TNNT1P13805 278 aa4.06□□□□□ -1.76
TRAPPC13-204ENST00000438419 PRPH2P23942 346 aa4.06□□□□□ -1.76
TRAPPC13-204ENST00000438419 STAT1P42224 750 aa4.06□□□□□ -1.76
TRAPPC13-204ENST00000438419 CPA2P48052 419 aa4.06□□□□□ -1.76
TRAPPC13-204ENST00000438419 ALKBH1Q13686 389 aaKnown RBP4.06□□□□□ -1.76
TRAPPC13-204ENST00000438419 CTXN3Q4LDR2 81 aa4.06□□□□□ -1.76
TRAPPC13-204ENST00000438419 C10orf76Q5T2E6 689 aa4.06□□□□□ -1.76
TRAPPC13-204ENST00000438419 ZNF425Q6IV72 752 aa4.06□□□□□ -1.76
TRAPPC13-204ENST00000438419 CCDC70Q6NSX1 233 aa4.06□□□□□ -1.76
TRAPPC13-204ENST00000438419 C11orf87Q6NUJ2 197 aa4.06□□□□□ -1.76
TRAPPC13-204ENST00000438419 KIAA1324Q6UXG2 1013 aaKnown RBP4.06□□□□□ -1.76
TRAPPC13-204ENST00000438419 RTL10Q7L3V2 364 aa4.06□□□□□ -1.76
TRAPPC13-204ENST00000438419 MDGA2Q7Z553 956 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms