RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 KRT37O76014 449 aa26.36■■□□□ 1.81
CPNE1-216ENST00000437340 SUN1O94901 812 aa26.36■■□□□ 1.81
CPNE1-216ENST00000437340 TAC1P20366 129 aa26.36■■□□□ 1.81
CPNE1-216ENST00000437340 TEX44Q53QW1 395 aa26.36■■□□□ 1.81
CPNE1-216ENST00000437340 NPAS4Q8IUM7 802 aa26.36■■□□□ 1.81
CPNE1-216ENST00000437340 GRAMD1AQ96CP6 724 aa26.36■■□□□ 1.81
CPNE1-216ENST00000437340 OXCT2Q9BYC2 517 aaPredicted RBP26.36■■□□□ 1.81
CPNE1-216ENST00000437340 GPR62Q9BZJ7 368 aa26.36■■□□□ 1.81
CPNE1-216ENST00000437340 CATSPERBQ9H7T0 1116 aa26.36■■□□□ 1.81
CPNE1-216ENST00000437340 MARCH5Q9NX47 278 aa26.36■■□□□ 1.81
CPNE1-216ENST00000437340 MOCS1Q9NZB8 636 aa26.36■■□□□ 1.81
CPNE1-216ENST00000437340 SFMBT1Q9UHJ3 866 aa26.36■■□□□ 1.81
CPNE1-216ENST00000437340 FAM92AA1XBS5 289 aa26.35■■□□□ 1.81
CPNE1-216ENST00000437340 ALDH1A2O94788 518 aa26.35■■□□□ 1.81
CPNE1-216ENST00000437340 OAS1P00973 400 aaKnown RBP26.35■■□□□ 1.81
CPNE1-216ENST00000437340 SNRPAP09012 282 aaKnown RBP26.35■■□□□ 1.81
CPNE1-216ENST00000437340 SLC11A1P49279 550 aa26.35■■□□□ 1.81
CPNE1-216ENST00000437340 PGFP49763 221 aa26.35■■□□□ 1.81
CPNE1-216ENST00000437340 SLC18A2Q05940 514 aa26.35■■□□□ 1.81
CPNE1-216ENST00000437340 PDK4Q16654 411 aa26.35■■□□□ 1.81
CPNE1-216ENST00000437340 DDR2Q16832 855 aa26.35■■□□□ 1.81
CPNE1-216ENST00000437340 CEP57Q86XR8 500 aa26.35■■□□□ 1.81
CPNE1-216ENST00000437340 DPF3Q92784 378 aa26.35■■□□□ 1.81
CPNE1-216ENST00000437340 TBC1D31Q96DN5 1066 aa26.35■■□□□ 1.81
CPNE1-216ENST00000437340 GBA3Q9H227 469 aa26.35■■□□□ 1.81
CPNE1-216ENST00000437340 MICAL3Q7RTP6 2002 aa26.35■■□□□ 1.81
CPNE1-216ENST00000437340 KCNU1A8MYU2 1149 aa26.35■■□□□ 1.81
CPNE1-216ENST00000437340 PARNO95453 639 aaKnown RBP26.35■■□□□ 1.81
CPNE1-216ENST00000437340 AP2A1O95782 977 aa26.35■■□□□ 1.81
CPNE1-216ENST00000437340 FOXN2P32314 431 aa26.35■■□□□ 1.81
CPNE1-216ENST00000437340 HHATQ5VTY9 493 aa26.35■■□□□ 1.81
CPNE1-216ENST00000437340 CCDC121Q6ZUS5 278 aa26.35■■□□□ 1.81
CPNE1-216ENST00000437340 SH2D5Q6ZV89 423 aa26.35■■□□□ 1.81
CPNE1-216ENST00000437340 TTC17Q96AE7 1141 aa26.35■■□□□ 1.81
CPNE1-216ENST00000437340 MTBPQ96DY7 904 aa26.35■■□□□ 1.81
CPNE1-216ENST00000437340 TSGA13Q96PP4 275 aa26.35■■□□□ 1.81
CPNE1-216ENST00000437340 PAIP2Q9BPZ3 127 aaKnown RBP26.35■■□□□ 1.81
CPNE1-216ENST00000437340 SIK2Q9H0K1 926 aa26.35■■□□□ 1.81
CPNE1-216ENST00000437340 TLR6Q9Y2C9 796 aa26.35■■□□□ 1.81
CPNE1-216ENST00000437340 CXorf49A8MYA2 514 aaPredicted RBP26.34■■□□□ 1.81
CPNE1-216ENST00000437340 CLTBP09497 229 aa26.34■■□□□ 1.81
CPNE1-216ENST00000437340 SRGAP2BP0DMP2 458 aa26.34■■□□□ 1.81
CPNE1-216ENST00000437340 SLC2A3P11169 496 aa26.34■■□□□ 1.81
CPNE1-216ENST00000437340 PGAM1P18669 254 aa26.34■■□□□ 1.81
CPNE1-216ENST00000437340 SLC1A5Q15758 541 aa26.34■■□□□ 1.81
CPNE1-216ENST00000437340 RWDD4Q6NW29 188 aaKnown RBP26.34■■□□□ 1.81
CPNE1-216ENST00000437340 FUT10Q6P4F1 479 aa26.34■■□□□ 1.81
CPNE1-216ENST00000437340 NECAB2Q7Z6G3 386 aa26.34■■□□□ 1.81
CPNE1-216ENST00000437340 SPPL2BQ8TCT7 592 aa26.34■■□□□ 1.81
CPNE1-216ENST00000437340 FCRL2Q96LA5 508 aaPredicted RBP26.34■■□□□ 1.81
CPNE1-216ENST00000437340 C1orf74Q96LT6 269 aa26.34■■□□□ 1.81
CPNE1-216ENST00000437340 SMYD2Q9NRG4 433 aa26.34■■□□□ 1.81
CPNE1-216ENST00000437340 TMEM39AQ9NV64 488 aa26.34■■□□□ 1.81
CPNE1-216ENST00000437340 VWA8A3KMH1 1905 aa26.33■■□□□ 1.81
CPNE1-216ENST00000437340 WDR27A2RRH5 827 aa26.33■■□□□ 1.81
CPNE1-216ENST00000437340 H7C4K7 107 aa26.33■■□□□ 1.81
CPNE1-216ENST00000437340 MSI1O43347 362 aaKnown RBP26.33■■□□□ 1.81
CPNE1-216ENST00000437340 KRT38O76015 456 aa26.33■■□□□ 1.81
CPNE1-216ENST00000437340 RTN3O95197 1032 aaPredicted RBP26.33■■□□□ 1.81
CPNE1-216ENST00000437340 CXCL10P02778 98 aa26.33■■□□□ 1.81
CPNE1-216ENST00000437340 SERPINB9P50453 376 aa26.33■■□□□ 1.81
CPNE1-216ENST00000437340 GPR17Q13304 367 aa26.33■■□□□ 1.81
CPNE1-216ENST00000437340 TEKT5Q96M29 485 aa26.33■■□□□ 1.81
CPNE1-216ENST00000437340 COMMD8Q9NX08 183 aa26.33■■□□□ 1.81
CPNE1-216ENST00000437340 OSER1Q9NX31 292 aa26.33■■□□□ 1.81
CPNE1-216ENST00000437340 USP15Q9Y4E8 981 aaPredicted RBP26.33■■□□□ 1.81
CPNE1-216ENST00000437340 PLXNA3P51805 1871 aa26.33■■□□□ 1.81
CPNE1-216ENST00000437340 TTC3P53804 2025 aa26.33■■□□□ 1.81
CPNE1-216ENST00000437340 ANKRD65E5RJM6 399 aa26.33■■□□□ 1.8
CPNE1-216ENST00000437340 F5H423 210 aaPredicted RBP26.33■■□□□ 1.8
CPNE1-216ENST00000437340 TBC1D4O60343 1298 aa26.33■■□□□ 1.8
CPNE1-216ENST00000437340 CCNCP24863 283 aa26.33■■□□□ 1.8
CPNE1-216ENST00000437340 PSEN1P49768 467 aa26.33■■□□□ 1.8
CPNE1-216ENST00000437340 GATMP50440 423 aa26.33■■□□□ 1.8
CPNE1-216ENST00000437340 ZBTB17Q13105 803 aa26.33■■□□□ 1.8
CPNE1-216ENST00000437340 NAB1Q13506 487 aa26.33■■□□□ 1.8
CPNE1-216ENST00000437340 SEPT7Q16181 437 aaKnown RBP26.33■■□□□ 1.8
CPNE1-216ENST00000437340 RNF187Q5TA31 235 aaPredicted RBP26.33■■□□□ 1.8
CPNE1-216ENST00000437340 LVRNQ6Q4G3 990 aa26.33■■□□□ 1.8
CPNE1-216ENST00000437340 ATAD1Q8NBU5 361 aa26.33■■□□□ 1.8
CPNE1-216ENST00000437340 TCP10LQ8TDR4 215 aa26.33■■□□□ 1.8
CPNE1-216ENST00000437340 C2orf15Q8WU43 125 aaKnown RBP26.33■■□□□ 1.8
CPNE1-216ENST00000437340 ARNTL2Q8WYA1 636 aa26.33■■□□□ 1.8
CPNE1-216ENST00000437340 SLC39A13Q96H72 371 aa26.33■■□□□ 1.8
CPNE1-216ENST00000437340 APOPT1Q96IL0 206 aa26.33■■□□□ 1.8
CPNE1-216ENST00000437340 PLCD4Q9BRC7 762 aa26.33■■□□□ 1.8
CPNE1-216ENST00000437340 FNIP2Q9P278 1114 aa26.33■■□□□ 1.8
CPNE1-216ENST00000437340 MYO18AQ92614 2054 aaKnown RBP26.32■■□□□ 1.8
CPNE1-216ENST00000437340 LOC101059915A0A1B0GWI6 518 aaPredicted RBP26.32■■□□□ 1.8
CPNE1-216ENST00000437340 ZBTB24O43167 697 aaPredicted RBP26.32■■□□□ 1.8
CPNE1-216ENST00000437340 GALTP07902 379 aa26.32■■□□□ 1.8
CPNE1-216ENST00000437340 MGAT1P26572 445 aa26.32■■□□□ 1.8
CPNE1-216ENST00000437340 CD68P34810 354 aaPredicted RBP26.32■■□□□ 1.8
CPNE1-216ENST00000437340 GPR15P49685 360 aa26.32■■□□□ 1.8
CPNE1-216ENST00000437340 SDHAF4Q5VUM1 108 aa26.32■■□□□ 1.8
CPNE1-216ENST00000437340 KCTD11Q693B1 232 aa26.32■■□□□ 1.8
CPNE1-216ENST00000437340 CASC4Q6P4E1 433 aa26.32■■□□□ 1.8
CPNE1-216ENST00000437340 ZNF449Q6P9G9 518 aa26.32■■□□□ 1.8
CPNE1-216ENST00000437340 TRMT10BQ6PF06 316 aaKnown RBP26.32■■□□□ 1.8
CPNE1-216ENST00000437340 ZSCAN18Q8TBC5 510 aaPredicted RBP26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms