RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 GLUD2P49448 558 aa3.61□□□□□ -1.83
HMGB1P31-201ENST00000437242 ABATP80404 500 aa3.61□□□□□ -1.83
HMGB1P31-201ENST00000437242 TRAF1Q13077 416 aa3.61□□□□□ -1.83
HMGB1P31-201ENST00000437242 SEMA5AQ13591 1074 aa3.61□□□□□ -1.83
HMGB1P31-201ENST00000437242 PPP2R5AQ15172 486 aa3.61□□□□□ -1.83
HMGB1P31-201ENST00000437242 DCAF12L2Q5VW00 463 aa3.61□□□□□ -1.83
HMGB1P31-201ENST00000437242 WDR93Q6P2C0 686 aa3.61□□□□□ -1.83
HMGB1P31-201ENST00000437242 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.61□□□□□ -1.83
HMGB1P31-201ENST00000437242 C16orf82Q7Z2V1 217 aa3.61□□□□□ -1.83
HMGB1P31-201ENST00000437242 NPIPB3Q92617 1050 aa3.61□□□□□ -1.83
HMGB1P31-201ENST00000437242 FAR2Q96K12 515 aa3.61□□□□□ -1.83
HMGB1P31-201ENST00000437242 NUDT22Q9BRQ3 303 aa3.61□□□□□ -1.83
HMGB1P31-201ENST00000437242 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P31-201ENST00000437242 PCDHAC1Q9H158 963 aa3.61□□□□□ -1.83
HMGB1P31-201ENST00000437242 NUP62CLQ9H1M0 184 aa3.61□□□□□ -1.83
HMGB1P31-201ENST00000437242 TNFSF13BQ9Y275 285 aa3.61□□□□□ -1.83
HMGB1P31-201ENST00000437242 OR2W5A6NFC9 320 aa3.6□□□□□ -1.83
HMGB1P31-201ENST00000437242 NPC1O15118 1278 aa3.6□□□□□ -1.83
HMGB1P31-201ENST00000437242 KCNQ3O43525 872 aa3.6□□□□□ -1.83
HMGB1P31-201ENST00000437242 TSPAN6O43657 245 aa3.6□□□□□ -1.83
HMGB1P31-201ENST00000437242 NEURL1O76050 574 aa3.6□□□□□ -1.83
HMGB1P31-201ENST00000437242 KAT7O95251 611 aa3.6□□□□□ -1.83
HMGB1P31-201ENST00000437242 PARNO95453 639 aaKnown RBP3.6□□□□□ -1.83
HMGB1P31-201ENST00000437242 PPP1R3DO95685 299 aa3.6□□□□□ -1.83
HMGB1P31-201ENST00000437242 LCKP06239 509 aa3.6□□□□□ -1.83
HMGB1P31-201ENST00000437242 PDLIM4P50479 330 aa3.6□□□□□ -1.83
HMGB1P31-201ENST00000437242 SELENOVP59797 346 aa3.6□□□□□ -1.83
HMGB1P31-201ENST00000437242 ZP1P60852 638 aa3.6□□□□□ -1.83
HMGB1P31-201ENST00000437242 KIF5AQ12840 1032 aa3.6□□□□□ -1.83
HMGB1P31-201ENST00000437242 GRM3Q14832 879 aa3.6□□□□□ -1.83
HMGB1P31-201ENST00000437242 SLC5A9Q2M3M2 681 aa3.6□□□□□ -1.83
HMGB1P31-201ENST00000437242 ZNF718Q3SXZ3 478 aa3.6□□□□□ -1.83
HMGB1P31-201ENST00000437242 ARHGAP15Q53QZ3 475 aa3.6□□□□□ -1.83
HMGB1P31-201ENST00000437242 C10orf76Q5T2E6 689 aa3.6□□□□□ -1.83
HMGB1P31-201ENST00000437242 RAP1GAP2Q684P5 730 aa3.6□□□□□ -1.83
HMGB1P31-201ENST00000437242 KIAA0408Q6ZU52 694 aa3.6□□□□□ -1.83
HMGB1P31-201ENST00000437242 ARMC9Q7Z3E5 817 aa3.6□□□□□ -1.83
HMGB1P31-201ENST00000437242 TTC30AQ86WT1 665 aa3.6□□□□□ -1.83
HMGB1P31-201ENST00000437242 CAMK1DQ8IU85 385 aa3.6□□□□□ -1.83
HMGB1P31-201ENST00000437242 RAVER1Q8IY67 606 aaKnown RBP3.6□□□□□ -1.83
HMGB1P31-201ENST00000437242 SLC25A41Q8N5S1 370 aa3.6□□□□□ -1.83
HMGB1P31-201ENST00000437242 ATP11CQ8NB49 1132 aa3.6□□□□□ -1.83
HMGB1P31-201ENST00000437242 ADAMTS14Q8WXS8 1223 aa3.6□□□□□ -1.83
HMGB1P31-201ENST00000437242 RTP4Q96DX8 246 aa3.6□□□□□ -1.83
HMGB1P31-201ENST00000437242 HES6Q96HZ4 224 aa3.6□□□□□ -1.83
HMGB1P31-201ENST00000437242 APOL5Q9BWW9 433 aa3.6□□□□□ -1.83
HMGB1P31-201ENST00000437242 RETREG1Q9H6L5 497 aa3.6□□□□□ -1.83
HMGB1P31-201ENST00000437242 PNRC2Q9NPJ4 139 aaKnown RBP3.6□□□□□ -1.83
HMGB1P31-201ENST00000437242 RNF146Q9NTX7 359 aa3.6□□□□□ -1.83
HMGB1P31-201ENST00000437242 CHPF2Q9P2E5 772 aa3.6□□□□□ -1.83
HMGB1P31-201ENST00000437242 ZMYND8Q9ULU4 1186 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P31-201ENST00000437242 FRMPD2Q68DX3 1309 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P31-201ENST00000437242 A0A0B4J293 547 aa3.59□□□□□ -1.83
HMGB1P31-201ENST00000437242 RHPN2P1A8MT19 583 aa3.59□□□□□ -1.83
HMGB1P31-201ENST00000437242 KIF3BO15066 747 aa3.59□□□□□ -1.83
HMGB1P31-201ENST00000437242 SLC16A5O15375 505 aa3.59□□□□□ -1.83
HMGB1P31-201ENST00000437242 ZBTB11O95625 1053 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P31-201ENST00000437242 FGFR2P21802 821 aa3.59□□□□□ -1.83
HMGB1P31-201ENST00000437242 RFX5P48382 616 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P31-201ENST00000437242 POLE2P56282 527 aa3.59□□□□□ -1.83
HMGB1P31-201ENST00000437242 SEC61A1P61619 476 aaKnown RBP3.59□□□□□ -1.83
HMGB1P31-201ENST00000437242 SHC2P98077 582 aa3.59□□□□□ -1.83
HMGB1P31-201ENST00000437242 POU3F1Q03052 451 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P31-201ENST00000437242 TRAF2Q12933 501 aa3.59□□□□□ -1.83
HMGB1P31-201ENST00000437242 HSP90AB2PQ58FF8 381 aa3.59□□□□□ -1.83
HMGB1P31-201ENST00000437242 FSCBQ5H9T9 825 aa3.59□□□□□ -1.83
HMGB1P31-201ENST00000437242 CCDC181Q5TID7 509 aa3.59□□□□□ -1.83
HMGB1P31-201ENST00000437242 KLHDC7AQ5VTJ3 777 aa3.59□□□□□ -1.83
HMGB1P31-201ENST00000437242 KRTAP5-1Q6L8H4 278 aa3.59□□□□□ -1.83
HMGB1P31-201ENST00000437242 H1FNTQ75WM6 255 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P31-201ENST00000437242 BEND5Q7L4P6 421 aa3.59□□□□□ -1.83
HMGB1P31-201ENST00000437242 ADGRF3Q8IZF5 1079 aa3.59□□□□□ -1.83
HMGB1P31-201ENST00000437242 CCDC33Q8N5R6 958 aa3.59□□□□□ -1.83
HMGB1P31-201ENST00000437242 ENGASEQ8NFI3 743 aa3.59□□□□□ -1.83
HMGB1P31-201ENST00000437242 PHKBQ93100 1093 aa3.59□□□□□ -1.83
HMGB1P31-201ENST00000437242 WDR77Q9BQA1 342 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P31-201ENST00000437242 C1QTNF4Q9BXJ3 329 aa3.59□□□□□ -1.83
HMGB1P31-201ENST00000437242 SFXN1Q9H9B4 322 aa3.59□□□□□ -1.83
HMGB1P31-201ENST00000437242 KCNK9Q9NPC2 374 aa3.59□□□□□ -1.83
HMGB1P31-201ENST00000437242 SCRIBQ14160 1630 aa3.59□□□□□ -1.84
HMGB1P31-201ENST00000437242 GXYLT2A0PJZ3 443 aa3.58□□□□□ -1.84
HMGB1P31-201ENST00000437242 VSTM5A8MXK1 200 aa3.58□□□□□ -1.84
HMGB1P31-201ENST00000437242 LIASO43766 372 aa3.58□□□□□ -1.84
HMGB1P31-201ENST00000437242 CGAP01215 116 aa3.58□□□□□ -1.84
HMGB1P31-201ENST00000437242 ALDOAP04075 364 aaKnown RBP3.58□□□□□ -1.84
HMGB1P31-201ENST00000437242 ALDOCP09972 364 aaKnown RBP3.58□□□□□ -1.84
HMGB1P31-201ENST00000437242 SRGAP2BP0DMP2 458 aa3.58□□□□□ -1.84
HMGB1P31-201ENST00000437242 PECAM1P16284 738 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P31-201ENST00000437242 EEF1A2Q05639 463 aaKnown RBP3.58□□□□□ -1.84
HMGB1P31-201ENST00000437242 CSHL1Q14406 222 aa3.58□□□□□ -1.84
HMGB1P31-201ENST00000437242 GBX1Q14549 363 aa3.58□□□□□ -1.84
HMGB1P31-201ENST00000437242 HLFQ16534 295 aa3.58□□□□□ -1.84
HMGB1P31-201ENST00000437242 ZNF672Q499Z4 452 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P31-201ENST00000437242 C8orf82Q6P1X6 216 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P31-201ENST00000437242 FMNL3Q8IVF7 1028 aa3.58□□□□□ -1.84
HMGB1P31-201ENST00000437242 FAM217AQ8IXS0 508 aa3.58□□□□□ -1.84
HMGB1P31-201ENST00000437242 FAM185AQ8N0U4 392 aa3.58□□□□□ -1.84
HMGB1P31-201ENST00000437242 SNX27Q96L92 541 aa3.58□□□□□ -1.84
HMGB1P31-201ENST00000437242 C8orf48Q96LL4 319 aa3.58□□□□□ -1.84
HMGB1P31-201ENST00000437242 ADAD1Q96M93 576 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms