RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 DNALI1O14645 258 aaPredicted RBP16.17■□□□□ 0.18
PTPN13-204ENST00000436978 ZBTB14O43829 449 aa16.17■□□□□ 0.18
PTPN13-204ENST00000436978 TSPAN3O60637 253 aa16.17■□□□□ 0.18
PTPN13-204ENST00000436978 ACAT1P24752 427 aaKnown RBP16.17■□□□□ 0.18
PTPN13-204ENST00000436978 SLC44A2Q8IWA5 706 aaPredicted RBP16.17■□□□□ 0.18
PTPN13-204ENST00000436978 TCF7L2Q9NQB0 619 aa16.17■□□□□ 0.18
PTPN13-204ENST00000436978 SNUPNO95149 360 aaKnown RBP16.17■□□□□ 0.18
PTPN13-204ENST00000436978 FGD2Q7Z6J4 655 aa16.17■□□□□ 0.18
PTPN13-204ENST00000436978 C11orf74Q86VG3 221 aa16.17■□□□□ 0.18
PTPN13-204ENST00000436978 UBE2E3Q969T4 207 aa16.17■□□□□ 0.18
PTPN13-204ENST00000436978 CELF6Q96J87 481 aaKnown RBP16.17■□□□□ 0.18
PTPN13-204ENST00000436978 MAF1Q9H063 256 aa16.17■□□□□ 0.18
PTPN13-204ENST00000436978 DDX4Q9NQI0 724 aaKnown RBP16.17■□□□□ 0.18
PTPN13-204ENST00000436978 CRYL1Q9Y2S2 319 aa16.17■□□□□ 0.18
PTPN13-204ENST00000436978 TNPO3Q9Y5L0 923 aaKnown RBP16.17■□□□□ 0.18
PTPN13-204ENST00000436978 ASTN2O75129 1339 aaPredicted RBP16.17■□□□□ 0.18
PTPN13-204ENST00000436978 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.17■□□□□ 0.18
PTPN13-204ENST00000436978 CASP7P55210 303 aa16.17■□□□□ 0.18
PTPN13-204ENST00000436978 PURAQ00577 322 aaKnown RBP16.17■□□□□ 0.18
PTPN13-204ENST00000436978 USP39Q53GS9 565 aaKnown RBP16.17■□□□□ 0.18
PTPN13-204ENST00000436978 KYAT3Q6YP21 454 aaKnown RBP16.17■□□□□ 0.18
PTPN13-204ENST00000436978 KIAA2013Q8IYS2 634 aa16.17■□□□□ 0.18
PTPN13-204ENST00000436978 MIER2Q8N344 545 aa16.17■□□□□ 0.18
PTPN13-204ENST00000436978 OMDQ99983 421 aa16.17■□□□□ 0.18
PTPN13-204ENST00000436978 TRPC4Q9UBN4 977 aa16.17■□□□□ 0.18
PTPN13-204ENST00000436978 CNPP09543 421 aaKnown RBP16.17■□□□□ 0.18
PTPN13-204ENST00000436978 MLH1P40692 756 aa16.17■□□□□ 0.18
PTPN13-204ENST00000436978 OVGP1Q12889 678 aa16.17■□□□□ 0.18
PTPN13-204ENST00000436978 SYTL1Q8IYJ3 562 aa16.17■□□□□ 0.18
PTPN13-204ENST00000436978 LRRC39Q96DD0 335 aa16.17■□□□□ 0.18
PTPN13-204ENST00000436978 SENP8Q96LD8 212 aa16.17■□□□□ 0.18
PTPN13-204ENST00000436978 QRFPRQ96P65 431 aa16.17■□□□□ 0.18
PTPN13-204ENST00000436978 SIGLEC16A6NMB1 481 aa16.16■□□□□ 0.18
PTPN13-204ENST00000436978 SLC2A4P14672 509 aa16.16■□□□□ 0.18
PTPN13-204ENST00000436978 CPA2P48052 419 aa16.16■□□□□ 0.18
PTPN13-204ENST00000436978 FBXL19Q6PCT2 694 aa16.16■□□□□ 0.18
PTPN13-204ENST00000436978 FAM120BQ96EK7 910 aaKnown RBP16.16■□□□□ 0.18
PTPN13-204ENST00000436978 PAPOLBQ9NRJ5 636 aaKnown RBP16.16■□□□□ 0.18
PTPN13-204ENST00000436978 TNFSF13BQ9Y275 285 aa16.16■□□□□ 0.18
PTPN13-204ENST00000436978 RIPK2O43353 540 aa16.16■□□□□ 0.18
PTPN13-204ENST00000436978 PTPN1P18031 435 aaKnown RBP16.16■□□□□ 0.18
PTPN13-204ENST00000436978 DGKAP23743 735 aa16.16■□□□□ 0.18
PTPN13-204ENST00000436978 NUP107P57740 925 aa16.16■□□□□ 0.18
PTPN13-204ENST00000436978 CDK16Q00536 496 aa16.16■□□□□ 0.18
PTPN13-204ENST00000436978 MICU2Q8IYU8 434 aa16.16■□□□□ 0.18
PTPN13-204ENST00000436978 KYQ8NBH2 561 aa16.16■□□□□ 0.18
PTPN13-204ENST00000436978 SUSD6Q92537 303 aa16.16■□□□□ 0.18
PTPN13-204ENST00000436978 USP7Q93009 1102 aa16.16■□□□□ 0.18
PTPN13-204ENST00000436978 TMEM237Q96Q45 408 aa16.16■□□□□ 0.18
PTPN13-204ENST00000436978 DPY30Q9C005 99 aa16.16■□□□□ 0.18
PTPN13-204ENST00000436978 MAPK9P45984 424 aa16.16■□□□□ 0.18
PTPN13-204ENST00000436978 ALDH9A1P49189 494 aa16.16■□□□□ 0.18
PTPN13-204ENST00000436978 RRP1BQ14684 758 aaKnown RBP16.16■□□□□ 0.18
PTPN13-204ENST00000436978 CYP2W1Q8TAV3 490 aa16.16■□□□□ 0.18
PTPN13-204ENST00000436978 L2HGDHQ9H9P8 463 aa16.16■□□□□ 0.18
PTPN13-204ENST00000436978 PALMDQ9NP74 551 aa16.16■□□□□ 0.18
PTPN13-204ENST00000436978 ARHGAP20Q9P2F6 1191 aa16.16■□□□□ 0.18
PTPN13-204ENST00000436978 NQO1P15559 274 aaKnown RBP16.16■□□□□ 0.18
PTPN13-204ENST00000436978 MGAT1P26572 445 aa16.16■□□□□ 0.18
PTPN13-204ENST00000436978 SERPINB1P30740 379 aa16.16■□□□□ 0.18
PTPN13-204ENST00000436978 HLA-DQA1Q5Y7H0 255 aa16.16■□□□□ 0.18
PTPN13-204ENST00000436978 CAAP1Q9H8G2 361 aa16.16■□□□□ 0.18
PTPN13-204ENST00000436978 FBXO10Q9UK96 956 aa16.16■□□□□ 0.18
PTPN13-204ENST00000436978 CCDC157Q569K6 752 aa16.16■□□□□ 0.18
PTPN13-204ENST00000436978 EID3Q8N140 333 aa16.16■□□□□ 0.18
PTPN13-204ENST00000436978 FAM136AQ96C01 138 aa16.16■□□□□ 0.18
PTPN13-204ENST00000436978 BDH2Q9BUT1 245 aa16.16■□□□□ 0.18
PTPN13-204ENST00000436978 SARSP49591 514 aaKnown RBP16.16■□□□□ 0.18
PTPN13-204ENST00000436978 ERFP50548 548 aa16.16■□□□□ 0.18
PTPN13-204ENST00000436978 REM2Q8IYK8 340 aaPredicted RBP16.16■□□□□ 0.18
PTPN13-204ENST00000436978 RPRD1BQ9NQG5 326 aaKnown RBP16.16■□□□□ 0.18
PTPN13-204ENST00000436978 NDUFS2O75306 463 aa16.16■□□□□ 0.18
PTPN13-204ENST00000436978 ATP6V1B2P21281 511 aa16.16■□□□□ 0.18
PTPN13-204ENST00000436978 TBL3Q12788 808 aaKnown RBP16.16■□□□□ 0.18
PTPN13-204ENST00000436978 BOP1Q14137 746 aaKnown RBP16.16■□□□□ 0.18
PTPN13-204ENST00000436978 ZNF786Q8N393 782 aa16.16■□□□□ 0.18
PTPN13-204ENST00000436978 FNDC5Q8NAU1 212 aa16.16■□□□□ 0.18
PTPN13-204ENST00000436978 ZNF470Q6ECI4 717 aa16.15■□□□□ 0.18
PTPN13-204ENST00000436978 C19orf60Q96EN9 201 aa16.15■□□□□ 0.18
PTPN13-204ENST00000436978 KCNMB3Q9NPA1 279 aa16.15■□□□□ 0.18
PTPN13-204ENST00000436978 MAGEC1O60732 1142 aa16.15■□□□□ 0.18
PTPN13-204ENST00000436978 NFICP08651 508 aa16.15■□□□□ 0.18
PTPN13-204ENST00000436978 TNNI3P19429 210 aa16.15■□□□□ 0.18
PTPN13-204ENST00000436978 PPM1AP35813 382 aa16.15■□□□□ 0.18
PTPN13-204ENST00000436978 GPR15P49685 360 aa16.15■□□□□ 0.18
PTPN13-204ENST00000436978 N4BP2L1Q5TBK1 243 aaPredicted RBP16.15■□□□□ 0.18
PTPN13-204ENST00000436978 DEPDC7Q96QD5 511 aa16.15■□□□□ 0.18
PTPN13-204ENST00000436978 CEP44Q9C0F1 390 aa16.15■□□□□ 0.18
PTPN13-204ENST00000436978 PCDHA11Q9Y5I1 949 aa16.15■□□□□ 0.18
PTPN13-204ENST00000436978 E9PBE3 544 aa16.15■□□□□ 0.18
PTPN13-204ENST00000436978 BAIAP3O94812 1187 aa16.15■□□□□ 0.18
PTPN13-204ENST00000436978 DDR2Q16832 855 aa16.15■□□□□ 0.18
PTPN13-204ENST00000436978 TRMT5Q32P41 509 aaKnown RBP16.15■□□□□ 0.18
PTPN13-204ENST00000436978 ARHGAP17Q68EM7 881 aa16.15■□□□□ 0.18
PTPN13-204ENST00000436978 FAM126AQ9BYI3 521 aaPredicted RBP16.15■□□□□ 0.18
PTPN13-204ENST00000436978 MFSD1Q9H3U5 465 aa16.15■□□□□ 0.18
PTPN13-204ENST00000436978 QSOX1O00391 747 aa16.15■□□□□ 0.18
PTPN13-204ENST00000436978 FKBP6O75344 327 aa16.15■□□□□ 0.18
PTPN13-204ENST00000436978 ERBB2P04626 1255 aa16.15■□□□□ 0.18
PTPN13-204ENST00000436978 TYMPP19971 482 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms