RNA–Protein interactions for RNA: ENST00000436630.6

RPE-208, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 1,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-208ENST00000436630 GRK7Q8WTQ7 553 aa13.8□□□□□ -0.2
RPE-208ENST00000436630 OSCP1Q8WVF1 389 aa13.8□□□□□ -0.2
RPE-208ENST00000436630 ATP2A3Q93084 1043 aa13.8□□□□□ -0.2
RPE-208ENST00000436630 NKD2Q969F2 451 aaPredicted RBP13.8□□□□□ -0.2
RPE-208ENST00000436630 IGSF8Q969P0 613 aa13.8□□□□□ -0.2
RPE-208ENST00000436630 HERPUD2Q9BSE4 406 aa13.8□□□□□ -0.2
RPE-208ENST00000436630 CARD6Q9BX69 1037 aa13.8□□□□□ -0.2
RPE-208ENST00000436630 MAGEB5Q9BZ81 275 aa13.8□□□□□ -0.2
RPE-208ENST00000436630 LRRC19Q9H756 370 aa13.8□□□□□ -0.2
RPE-208ENST00000436630 MARK1Q9P0L2 795 aa13.8□□□□□ -0.2
RPE-208ENST00000436630 FEZ2Q9UHY8 353 aaPredicted RBP13.8□□□□□ -0.2
RPE-208ENST00000436630 CDH22Q9UJ99 828 aa13.8□□□□□ -0.2
RPE-208ENST00000436630 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.79□□□□□ -0.2
RPE-208ENST00000436630 GOLGA6L7A0A1B0GV03 622 aa13.79□□□□□ -0.2
RPE-208ENST00000436630 TCRBV7S2A1N4TA0A589 114 aa13.79□□□□□ -0.2
RPE-208ENST00000436630 CFAP69A5D8W1 941 aa13.79□□□□□ -0.2
RPE-208ENST00000436630 LIASO43766 372 aa13.79□□□□□ -0.2
RPE-208ENST00000436630 MFSD11O43934 449 aa13.79□□□□□ -0.2
RPE-208ENST00000436630 ADH1CP00326 375 aa13.79□□□□□ -0.2
RPE-208ENST00000436630 OR1E1P30953 314 aa13.79□□□□□ -0.2
RPE-208ENST00000436630 VCPP55072 806 aaKnown RBP13.79□□□□□ -0.2
RPE-208ENST00000436630 YBEYP58557 167 aaPredicted RBP13.79□□□□□ -0.2
RPE-208ENST00000436630 OTUD4Q01804 1114 aaKnown RBP13.79□□□□□ -0.2
RPE-208ENST00000436630 ADCY2Q08462 1091 aa13.79□□□□□ -0.2
RPE-208ENST00000436630 FCHO2Q0JRZ9 810 aa13.79□□□□□ -0.2
RPE-208ENST00000436630 GALNT2Q10471 571 aa13.79□□□□□ -0.2
RPE-208ENST00000436630 ZNF177Q13360 481 aaPredicted RBP13.79□□□□□ -0.2
RPE-208ENST00000436630 LLGL1Q15334 1064 aa13.79□□□□□ -0.2
RPE-208ENST00000436630 CCDC85BQ15834 202 aaPredicted RBP13.79□□□□□ -0.2
RPE-208ENST00000436630 RNF43Q68DV7 783 aa13.79□□□□□ -0.2
RPE-208ENST00000436630 CCDC70Q6NSX1 233 aa13.79□□□□□ -0.2
RPE-208ENST00000436630 ADAT2Q7Z6V5 191 aaKnown RBP13.79□□□□□ -0.2
RPE-208ENST00000436630 CDKL3Q8IVW4 592 aaPredicted RBP13.79□□□□□ -0.2
RPE-208ENST00000436630 MFSD6LQ8IWD5 586 aa13.79□□□□□ -0.2
RPE-208ENST00000436630 YAF2Q8IY57 180 aa13.79□□□□□ -0.2
RPE-208ENST00000436630 PLCD3Q8N3E9 789 aa13.79□□□□□ -0.2
RPE-208ENST00000436630 TTC16Q8NEE8 873 aa13.79□□□□□ -0.2
RPE-208ENST00000436630 RIN3Q8TB24 985 aa13.79□□□□□ -0.2
RPE-208ENST00000436630 NXPE3Q969Y0 559 aa13.79□□□□□ -0.2
RPE-208ENST00000436630 MAGOHBQ96A72 148 aaKnown RBP13.79□□□□□ -0.2
RPE-208ENST00000436630 HDAC11Q96DB2 347 aa13.79□□□□□ -0.2
RPE-208ENST00000436630 TMA16Q96EY4 203 aaKnown RBP13.79□□□□□ -0.2
RPE-208ENST00000436630 OLFM3Q96PB7 478 aa13.79□□□□□ -0.2
RPE-208ENST00000436630 AP1M1Q9BXS5 423 aa13.79□□□□□ -0.2
RPE-208ENST00000436630 RBM12Q9NTZ6 932 aaKnown RBP13.79□□□□□ -0.2
RPE-208ENST00000436630 DUS2Q9NX74 493 aaKnown RBP13.79□□□□□ -0.2
RPE-208ENST00000436630 SMARCAL1Q9NZC9 954 aa13.79□□□□□ -0.2
RPE-208ENST00000436630 DTLQ9NZJ0 730 aa13.79□□□□□ -0.2
RPE-208ENST00000436630 ZNF212Q9UDV6 495 aa13.79□□□□□ -0.2
RPE-208ENST00000436630 HEY1Q9Y5J3 304 aa13.79□□□□□ -0.2
RPE-208ENST00000436630 NUP205Q92621 2012 aa13.78□□□□□ -0.2
RPE-208ENST00000436630 GRXCR2A6NFK2 248 aa13.78□□□□□ -0.2
RPE-208ENST00000436630 ARHGAP42A6NI28 874 aa13.78□□□□□ -0.2
RPE-208ENST00000436630 MTSS1O43312 755 aa13.78□□□□□ -0.2
RPE-208ENST00000436630 RAMP2O60895 175 aa13.78□□□□□ -0.2
RPE-208ENST00000436630 TBL1XO60907 577 aa13.78□□□□□ -0.2
RPE-208ENST00000436630 LUC7L3O95232 432 aaKnown RBP13.78□□□□□ -0.2
RPE-208ENST00000436630 PENKP01210 267 aaPredicted RBP13.78□□□□□ -0.2
RPE-208ENST00000436630 ITGAVP06756 1048 aa13.78□□□□□ -0.2
RPE-208ENST00000436630 PECAM1P16284 738 aaPredicted RBP13.78□□□□□ -0.2
RPE-208ENST00000436630 VIPR2P41587 438 aa13.78□□□□□ -0.2
RPE-208ENST00000436630 EIF3EP60228 445 aaKnown RBP13.78□□□□□ -0.2
RPE-208ENST00000436630 RPS24P62847 133 aaKnown RBP13.78□□□□□ -0.2
RPE-208ENST00000436630 GBE1Q04446 702 aa13.78□□□□□ -0.2
RPE-208ENST00000436630 CDH18Q13634 790 aa13.78□□□□□ -0.2
RPE-208ENST00000436630 BYSLQ13895 437 aaKnown RBP13.78□□□□□ -0.2
RPE-208ENST00000436630 DHX34Q14147 1143 aaKnown RBP13.78□□□□□ -0.2
RPE-208ENST00000436630 ALFQ53S48 1182 aa13.78□□□□□ -0.2
RPE-208ENST00000436630 AFMIDQ63HM1 303 aa13.78□□□□□ -0.2
RPE-208ENST00000436630 C1orf228Q6PIY5 440 aa13.78□□□□□ -0.2
RPE-208ENST00000436630 POTEHQ6S545 545 aa13.78□□□□□ -0.2
RPE-208ENST00000436630 SYDE1Q6ZW31 735 aaPredicted RBP13.78□□□□□ -0.2
RPE-208ENST00000436630 TFAP2DQ7Z6R9 452 aa13.78□□□□□ -0.2
RPE-208ENST00000436630 ATPAF2Q8N5M1 289 aa13.78□□□□□ -0.2
RPE-208ENST00000436630 CCDC26Q8TAB7 109 aa13.78□□□□□ -0.2
RPE-208ENST00000436630 SLC35B2Q8TB61 432 aa13.78□□□□□ -0.2
RPE-208ENST00000436630 DDI1Q8WTU0 396 aa13.78□□□□□ -0.2
RPE-208ENST00000436630 SLCO2A1Q92959 643 aa13.78□□□□□ -0.2
RPE-208ENST00000436630 IRF7Q92985 503 aa13.78□□□□□ -0.2
RPE-208ENST00000436630 QKIQ96PU8 341 aaKnown RBP eCLIP13.78□□□□□ -0.29e-7■■■■□ 19.5
RPE-208ENST00000436630 PHF7Q9BWX1 381 aaPredicted RBP13.78□□□□□ -0.2
RPE-208ENST00000436630 SPHK2Q9NRA0 654 aa13.78□□□□□ -0.2
RPE-208ENST00000436630 ETNK2Q9NVF9 386 aa13.78□□□□□ -0.2
RPE-208ENST00000436630 MPP6Q9NZW5 540 aa13.78□□□□□ -0.2
RPE-208ENST00000436630 PCYOX1Q9UHG3 505 aa13.78□□□□□ -0.2
RPE-208ENST00000436630 TBC1D30Q9Y2I9 924 aa13.78□□□□□ -0.2
RPE-208ENST00000436630 R3HDM2Q9Y2K5 976 aaKnown RBP13.78□□□□□ -0.2
RPE-208ENST00000436630 ILVBLA1L0T0 632 aa13.77□□□□□ -0.21
RPE-208ENST00000436630 EFCAB8A8MWE9 144 aa13.77□□□□□ -0.21
RPE-208ENST00000436630 ANHXE9PGG2 379 aa13.77□□□□□ -0.21
RPE-208ENST00000436630 HOXC11O43248 304 aaPredicted RBP13.77□□□□□ -0.21
RPE-208ENST00000436630 CNTN5O94779 1100 aa13.77□□□□□ -0.21
RPE-208ENST00000436630 GAS8O95995 478 aa13.77□□□□□ -0.21
RPE-208ENST00000436630 RHOCP08134 193 aa13.77□□□□□ -0.21
RPE-208ENST00000436630 PSMC3P17980 439 aa13.77□□□□□ -0.21
RPE-208ENST00000436630 HOXD9P28356 352 aaPredicted RBP13.77□□□□□ -0.21
RPE-208ENST00000436630 GARSP41250 739 aaKnown RBP13.77□□□□□ -0.21
RPE-208ENST00000436630 C2orf54Q08AI8 447 aa13.77□□□□□ -0.21
RPE-208ENST00000436630 SLC12A1Q13621 1099 aa13.77□□□□□ -0.21
RPE-208ENST00000436630 HTR4Q13639 388 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms