RNA–Protein interactions for RNA: ENST00000435327.2

CCDC13-202, Transcript of coiled-coil domain containing 13, humanhuman

TSL 2

Gene CCDC13, Length 821 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-202ENST00000435327 CHST9Q7L1S5 443 aa17.1■□□□□ 0.33
CCDC13-202ENST00000435327 NLRP14Q86W24 1093 aa17.1■□□□□ 0.33
CCDC13-202ENST00000435327 TMEM25Q86YD3 366 aa17.1■□□□□ 0.33
CCDC13-202ENST00000435327 ZDHHC14Q8IZN3 488 aa17.1■□□□□ 0.33
CCDC13-202ENST00000435327 ADGRG2Q8IZP9 1017 aa17.1■□□□□ 0.33
CCDC13-202ENST00000435327 CARNMT1Q8N4J0 409 aa17.1■□□□□ 0.33
CCDC13-202ENST00000435327 PLD5Q8N7P1 536 aa17.1■□□□□ 0.33
CCDC13-202ENST00000435327 RSAD2Q8WXG1 361 aa17.1■□□□□ 0.33
CCDC13-202ENST00000435327 ATP2A3Q93084 1043 aa17.1■□□□□ 0.33
CCDC13-202ENST00000435327 HAUS1Q96CS2 278 aa17.1■□□□□ 0.33
CCDC13-202ENST00000435327 FAM83CQ9BQN1 747 aa17.1■□□□□ 0.33
CCDC13-202ENST00000435327 TUBB2BQ9BVA1 445 aa17.1■□□□□ 0.33
CCDC13-202ENST00000435327 TRMT61BQ9BVS5 477 aaKnown RBP17.1■□□□□ 0.33
CCDC13-202ENST00000435327 BBS2Q9BXC9 721 aa17.1■□□□□ 0.33
CCDC13-202ENST00000435327 EBF3Q9H4W6 596 aa17.1■□□□□ 0.33
CCDC13-202ENST00000435327 TMEM248Q9NWD8 314 aa17.1■□□□□ 0.33
CCDC13-202ENST00000435327 PLK2Q9NYY3 685 aa17.1■□□□□ 0.33
CCDC13-202ENST00000435327 RNF14Q9UBS8 474 aa17.1■□□□□ 0.33
CCDC13-202ENST00000435327 LIMD1Q9UGP4 676 aa17.1■□□□□ 0.33
CCDC13-202ENST00000435327 CDH23Q9H251 3354 aa17.1■□□□□ 0.33
CCDC13-202ENST00000435327 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.09■□□□□ 0.33
CCDC13-202ENST00000435327 NEDD8-MDP1E9PL57 170 aa17.09■□□□□ 0.33
CCDC13-202ENST00000435327 CHADO15335 359 aa17.09■□□□□ 0.33
CCDC13-202ENST00000435327 MFSD11O43934 449 aa17.09■□□□□ 0.33
CCDC13-202ENST00000435327 CLDN11O75508 207 aa17.09■□□□□ 0.33
CCDC13-202ENST00000435327 ADH1CP00326 375 aa17.09■□□□□ 0.33
CCDC13-202ENST00000435327 TGM2P21980 687 aa17.09■□□□□ 0.33
CCDC13-202ENST00000435327 SERPINB6P35237 376 aa17.09■□□□□ 0.33
CCDC13-202ENST00000435327 MAPKAPK2P49137 400 aa17.09■□□□□ 0.33
CCDC13-202ENST00000435327 CKAP4Q07065 602 aaKnown RBP17.09■□□□□ 0.33
CCDC13-202ENST00000435327 KLF1Q13351 362 aaPredicted RBP17.09■□□□□ 0.33
CCDC13-202ENST00000435327 ZNF177Q13360 481 aaPredicted RBP17.09■□□□□ 0.33
CCDC13-202ENST00000435327 PAFAH1B3Q15102 231 aaKnown RBP17.09■□□□□ 0.33
CCDC13-202ENST00000435327 AAK1Q2M2I8 961 aa17.09■□□□□ 0.33
CCDC13-202ENST00000435327 RHBDF2Q6PJF5 856 aa17.09■□□□□ 0.33
CCDC13-202ENST00000435327 CCDC117Q8IWD4 279 aaPredicted RBP17.09■□□□□ 0.33
CCDC13-202ENST00000435327 HPS4Q9NQG7 708 aa17.09■□□□□ 0.33
CCDC13-202ENST00000435327 DONSONQ9NYP3 566 aa17.09■□□□□ 0.33
CCDC13-202ENST00000435327 HEY1Q9Y5J3 304 aa17.09■□□□□ 0.33
CCDC13-202ENST00000435327 MRFAP1Q9Y605 127 aa17.09■□□□□ 0.33
CCDC13-202ENST00000435327 TICRRQ7Z2Z1 1910 aa17.09■□□□□ 0.33
CCDC13-202ENST00000435327 NUP205Q92621 2012 aa17.08■□□□□ 0.33
CCDC13-202ENST00000435327 H0Y626 953 aa17.08■□□□□ 0.32
CCDC13-202ENST00000435327 APOC4-APOC2K7ER74 178 aa17.08■□□□□ 0.32
CCDC13-202ENST00000435327 PDE2AO00408 941 aaPredicted RBP17.08■□□□□ 0.32
CCDC13-202ENST00000435327 LUC7L3O95232 432 aaKnown RBP17.08■□□□□ 0.32
CCDC13-202ENST00000435327 APOC2P02655 101 aa17.08■□□□□ 0.32
CCDC13-202ENST00000435327 ADH5P11766 374 aa17.08■□□□□ 0.32
CCDC13-202ENST00000435327 PECAM1P16284 738 aaPredicted RBP17.08■□□□□ 0.32
CCDC13-202ENST00000435327 HOXD9P28356 352 aaPredicted RBP17.08■□□□□ 0.32
CCDC13-202ENST00000435327 OR1E1P30953 314 aa17.08■□□□□ 0.32
CCDC13-202ENST00000435327 GAD2Q05329 585 aa17.08■□□□□ 0.32
CCDC13-202ENST00000435327 TNK2Q07912 1038 aa17.08■□□□□ 0.32
CCDC13-202ENST00000435327 CDH18Q13634 790 aa17.08■□□□□ 0.32
CCDC13-202ENST00000435327 WHAMMP3Q1A5X7 153 aa17.08■□□□□ 0.32
CCDC13-202ENST00000435327 MPP7Q5T2T1 576 aa17.08■□□□□ 0.32
CCDC13-202ENST00000435327 FYB2Q5VWT5 728 aa17.08■□□□□ 0.32
CCDC13-202ENST00000435327 MFN1Q8IWA4 741 aa17.08■□□□□ 0.32
CCDC13-202ENST00000435327 CPA6Q8N4T0 437 aa17.08■□□□□ 0.32
CCDC13-202ENST00000435327 LZTR1Q8N653 840 aa17.08■□□□□ 0.32
CCDC13-202ENST00000435327 NPWQ8N729 165 aa17.08■□□□□ 0.32
CCDC13-202ENST00000435327 TTC13Q8NBP0 860 aa17.08■□□□□ 0.32
CCDC13-202ENST00000435327 NETO2Q8NC67 525 aa17.08■□□□□ 0.32
CCDC13-202ENST00000435327 P3H4Q92791 437 aa17.08■□□□□ 0.32
CCDC13-202ENST00000435327 P2RY11Q96G91 374 aa17.08■□□□□ 0.32
CCDC13-202ENST00000435327 CELF6Q96J87 481 aaKnown RBP17.08■□□□□ 0.32
CCDC13-202ENST00000435327 AP1M1Q9BXS5 423 aa17.08■□□□□ 0.32
CCDC13-202ENST00000435327 RETREG1Q9H6L5 497 aa17.08■□□□□ 0.32
CCDC13-202ENST00000435327 BRD9Q9H8M2 597 aa17.08■□□□□ 0.32
CCDC13-202ENST00000435327 ECT2Q9H8V3 914 aa17.08■□□□□ 0.32
CCDC13-202ENST00000435327 NDFIP2Q9NV92 336 aa17.08■□□□□ 0.32
CCDC13-202ENST00000435327 MARK1Q9P0L2 795 aa17.08■□□□□ 0.32
CCDC13-202ENST00000435327 IGSF9Q9P2J2 1179 aa17.08■□□□□ 0.32
CCDC13-202ENST00000435327 MIA3Q5JRA6 1907 aa17.08■□□□□ 0.32
CCDC13-202ENST00000435327 COL4A3Q01955 1670 aa17.07■□□□□ 0.32
CCDC13-202ENST00000435327 GOLGA6L10A0A0M3HER8 536 aa17.07■□□□□ 0.32
CCDC13-202ENST00000435327 KRIT1O00522 736 aa17.07■□□□□ 0.32
CCDC13-202ENST00000435327 MAP3K6O95382 1288 aa17.07■□□□□ 0.32
CCDC13-202ENST00000435327 PENKP01210 267 aaPredicted RBP17.07■□□□□ 0.32
CCDC13-202ENST00000435327 RHOCP08134 193 aa17.07■□□□□ 0.32
CCDC13-202ENST00000435327 TYRP14679 529 aa17.07■□□□□ 0.32
CCDC13-202ENST00000435327 OTUD4Q01804 1114 aaKnown RBP17.07■□□□□ 0.32
CCDC13-202ENST00000435327 GBE1Q04446 702 aa17.07■□□□□ 0.32
CCDC13-202ENST00000435327 NR1H3Q13133 447 aa17.07■□□□□ 0.32
CCDC13-202ENST00000435327 RUNX3Q13761 415 aa17.07■□□□□ 0.32
CCDC13-202ENST00000435327 TTC8Q8TAM2 541 aa17.07■□□□□ 0.32
CCDC13-202ENST00000435327 ACTL9Q8TC94 416 aa17.07■□□□□ 0.32
CCDC13-202ENST00000435327 NXPE3Q969Y0 559 aa17.07■□□□□ 0.32
CCDC13-202ENST00000435327 FAM118BQ9BPY3 351 aa17.07■□□□□ 0.32
CCDC13-202ENST00000435327 KLC2Q9H0B6 622 aa17.07■□□□□ 0.32
CCDC13-202ENST00000435327 KCNK12Q9HB15 430 aa17.07■□□□□ 0.32
CCDC13-202ENST00000435327 RRAGDQ9NQL2 400 aaPredicted RBP17.07■□□□□ 0.32
CCDC13-202ENST00000435327 SAE1Q9UBE0 346 aaPredicted RBP17.07■□□□□ 0.32
CCDC13-202ENST00000435327 ZNF212Q9UDV6 495 aa17.07■□□□□ 0.32
CCDC13-202ENST00000435327 R3HDM2Q9Y2K5 976 aaKnown RBP17.07■□□□□ 0.32
CCDC13-202ENST00000435327 NYNRINQ9P2P1 1898 aaKnown RBP17.07■□□□□ 0.32
CCDC13-202ENST00000435327 SHROOM3Q8TF72 1996 aa17.06■□□□□ 0.32
CCDC13-202ENST00000435327 LOC730098B7Z3J9 87 aa17.06■□□□□ 0.32
CCDC13-202ENST00000435327 DFFAO00273 331 aa17.06■□□□□ 0.32
CCDC13-202ENST00000435327 RAMP2O60895 175 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms