RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 CACNG4Q9UBN1 327 aa19.06■□□□□ 0.64
CLK1-205ENST00000434813 CENPFP49454 3210 aa19.06■□□□□ 0.64
CLK1-205ENST00000434813 PLIN3O60664 434 aa19.05■□□□□ 0.64
CLK1-205ENST00000434813 AP2A1O95782 977 aa19.05■□□□□ 0.64
CLK1-205ENST00000434813 LMNAP02545 664 aaKnown RBP19.05■□□□□ 0.64
CLK1-205ENST00000434813 RPSAP08865 295 aaKnown RBP19.05■□□□□ 0.64
CLK1-205ENST00000434813 GP5P40197 560 aa19.05■□□□□ 0.64
CLK1-205ENST00000434813 FLT3LGP49771 235 aa19.05■□□□□ 0.64
CLK1-205ENST00000434813 N4BP2L1Q5TBK1 243 aaPredicted RBP19.05■□□□□ 0.64
CLK1-205ENST00000434813 CFAP61Q8NHU2 1237 aa19.05■□□□□ 0.64
CLK1-205ENST00000434813 MYCBPQ99417 103 aaPredicted RBP19.05■□□□□ 0.64
CLK1-205ENST00000434813 ZNF395Q9H8N7 513 aaPredicted RBP19.05■□□□□ 0.64
CLK1-205ENST00000434813 SPC25Q9HBM1 224 aa19.05■□□□□ 0.64
CLK1-205ENST00000434813 TMEM30AQ9NV96 361 aa19.05■□□□□ 0.64
CLK1-205ENST00000434813 DCDC2Q9UHG0 476 aa19.05■□□□□ 0.64
CLK1-205ENST00000434813 CDH9Q9ULB4 789 aa19.05■□□□□ 0.64
CLK1-205ENST00000434813 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.05■□□□□ 0.64
CLK1-205ENST00000434813 RPS6KL1Q9Y6S9 549 aa19.05■□□□□ 0.64
CLK1-205ENST00000434813 MYBPHLA2RUH7 354 aa19.05■□□□□ 0.64
CLK1-205ENST00000434813 M0QZ92 97 aa19.05■□□□□ 0.64
CLK1-205ENST00000434813 MTSS1O43312 755 aa19.05■□□□□ 0.64
CLK1-205ENST00000434813 LTFP02788 710 aa19.05■□□□□ 0.64
CLK1-205ENST00000434813 THP07101 528 aa19.05■□□□□ 0.64
CLK1-205ENST00000434813 ZNF135P52742 658 aaPredicted RBP19.05■□□□□ 0.64
CLK1-205ENST00000434813 AQP5P55064 265 aa19.05■□□□□ 0.64
CLK1-205ENST00000434813 FRG1Q14331 258 aaKnown RBP19.05■□□□□ 0.64
CLK1-205ENST00000434813 INSCQ1MX18 579 aa19.05■□□□□ 0.64
CLK1-205ENST00000434813 ARL13BQ3SXY8 428 aa19.05■□□□□ 0.64
CLK1-205ENST00000434813 RINLQ6ZS11 566 aa19.05■□□□□ 0.64
CLK1-205ENST00000434813 ZCCHC23Q6ZST2 131 aa19.05■□□□□ 0.64
CLK1-205ENST00000434813 NPWQ8N729 165 aa19.05■□□□□ 0.64
CLK1-205ENST00000434813 TRIB2Q92519 343 aa19.05■□□□□ 0.64
CLK1-205ENST00000434813 HDAC11Q96DB2 347 aa19.05■□□□□ 0.64
CLK1-205ENST00000434813 ZNF570Q96NI8 536 aa19.05■□□□□ 0.64
CLK1-205ENST00000434813 CPNE1Q99829 537 aa19.05■□□□□ 0.64
CLK1-205ENST00000434813 LRRC40Q9H9A6 602 aa19.05■□□□□ 0.64
CLK1-205ENST00000434813 DDIT4Q9NX09 232 aa19.05■□□□□ 0.64
CLK1-205ENST00000434813 TAS2R1Q9NYW7 299 aa19.05■□□□□ 0.64
CLK1-205ENST00000434813 ARMCX1Q9P291 453 aa19.05■□□□□ 0.64
CLK1-205ENST00000434813 TXNDC16Q9P2K2 825 aa19.05■□□□□ 0.64
CLK1-205ENST00000434813 GABRQQ9UN88 632 aa19.05■□□□□ 0.64
CLK1-205ENST00000434813 TRPV2Q9Y5S1 764 aa19.05■□□□□ 0.64
CLK1-205ENST00000434813 CDY2AQ9Y6F7 541 aa19.05■□□□□ 0.64
CLK1-205ENST00000434813 ERI2A8K979 691 aaKnown RBP19.04■□□□□ 0.64
CLK1-205ENST00000434813 HHLA1C9JL84 531 aa19.04■□□□□ 0.64
CLK1-205ENST00000434813 KPNA6O60684 536 aa19.04■□□□□ 0.64
CLK1-205ENST00000434813 ENTPD5O75356 428 aa19.04■□□□□ 0.64
CLK1-205ENST00000434813 AMHP03971 560 aa19.04■□□□□ 0.64
CLK1-205ENST00000434813 FGF3P11487 239 aaPredicted RBP19.04■□□□□ 0.64
CLK1-205ENST00000434813 CYBAP13498 195 aa19.04■□□□□ 0.64
CLK1-205ENST00000434813 NCAM1P13591 858 aa19.04■□□□□ 0.64
CLK1-205ENST00000434813 CLCNKBP51801 687 aa19.04■□□□□ 0.64
CLK1-205ENST00000434813 RABGGTBP53611 331 aa19.04■□□□□ 0.64
CLK1-205ENST00000434813 CACNA2D1P54289 1103 aa19.04■□□□□ 0.64
CLK1-205ENST00000434813 TBCCQ15814 346 aa19.04■□□□□ 0.64
CLK1-205ENST00000434813 GNASQ5JWF2 1037 aa19.04■□□□□ 0.64
CLK1-205ENST00000434813 RFWD3Q6PCD5 774 aa19.04■□□□□ 0.64
CLK1-205ENST00000434813 BHLHA9Q7RTU4 235 aa19.04■□□□□ 0.64
CLK1-205ENST00000434813 C3orf58Q8NDZ4 430 aa19.04■□□□□ 0.64
CLK1-205ENST00000434813 TRPV1Q8NER1 839 aa19.04■□□□□ 0.64
CLK1-205ENST00000434813 OR52K1Q8NGK4 314 aa19.04■□□□□ 0.64
CLK1-205ENST00000434813 TTC8Q8TAM2 541 aa19.04■□□□□ 0.64
CLK1-205ENST00000434813 ISL2Q96A47 359 aa19.04■□□□□ 0.64
CLK1-205ENST00000434813 KCNK16Q96T55 309 aa19.04■□□□□ 0.64
CLK1-205ENST00000434813 GAD1Q99259 594 aa19.04■□□□□ 0.64
CLK1-205ENST00000434813 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.04■□□□□ 0.645e-6■□□□□ 10.5
CLK1-205ENST00000434813 PPARGC1AQ9UBK2 798 aaKnown RBP19.04■□□□□ 0.64
CLK1-205ENST00000434813 MARCOQ9UEW3 520 aaPredicted RBP19.04■□□□□ 0.64
CLK1-205ENST00000434813 F9P00740 461 aa19.03■□□□□ 0.64
CLK1-205ENST00000434813 USP17L7P0C7H9 530 aa19.03■□□□□ 0.64
CLK1-205ENST00000434813 MX2P20592 715 aa19.03■□□□□ 0.64
CLK1-205ENST00000434813 GARSP41250 739 aaKnown RBP19.03■□□□□ 0.64
CLK1-205ENST00000434813 GALNT2Q10471 571 aa19.03■□□□□ 0.64
CLK1-205ENST00000434813 GRTP1Q5TC63 336 aa19.03■□□□□ 0.64
CLK1-205ENST00000434813 KCTD11Q693B1 232 aa19.03■□□□□ 0.64
CLK1-205ENST00000434813 C16orf46Q6P387 395 aa19.03■□□□□ 0.64
CLK1-205ENST00000434813 DSTYKQ6XUX3 929 aa19.03■□□□□ 0.64
CLK1-205ENST00000434813 PPP1R14CQ8TAE6 165 aa19.03■□□□□ 0.64
CLK1-205ENST00000434813 MCUR1Q96AQ8 359 aa19.03■□□□□ 0.64
CLK1-205ENST00000434813 SMARCD1Q96GM5 515 aa19.03■□□□□ 0.64
CLK1-205ENST00000434813 COLEC11Q9BWP8 271 aa19.03■□□□□ 0.64
CLK1-205ENST00000434813 GBA3Q9H227 469 aa19.03■□□□□ 0.64
CLK1-205ENST00000434813 CASS4Q9NQ75 786 aa19.03■□□□□ 0.64
CLK1-205ENST00000434813 ADAM28Q9UKQ2 775 aa19.03■□□□□ 0.64
CLK1-205ENST00000434813 ST3GAL5Q9UNP4 418 aa19.03■□□□□ 0.64
CLK1-205ENST00000434813 PROCP04070 461 aa19.03■□□□□ 0.64
CLK1-205ENST00000434813 ERVK-10P10266 1014 aa19.03■□□□□ 0.64
CLK1-205ENST00000434813 KITP10721 976 aa19.03■□□□□ 0.64
CLK1-205ENST00000434813 MAGEA12P43365 314 aa19.03■□□□□ 0.64
CLK1-205ENST00000434813 RPL10AP62906 217 aaKnown RBP19.03■□□□□ 0.64
CLK1-205ENST00000434813 IRX4P78413 519 aa19.03■□□□□ 0.64
CLK1-205ENST00000434813 PDE1BQ01064 536 aa19.03■□□□□ 0.64
CLK1-205ENST00000434813 PRKCZQ05513 592 aa19.03■□□□□ 0.64
CLK1-205ENST00000434813 PCLAFQ15004 111 aa19.03■□□□□ 0.64
CLK1-205ENST00000434813 TEX9Q8N6V9 391 aa19.03■□□□□ 0.64
CLK1-205ENST00000434813 CAPNS2Q96L46 248 aa19.03■□□□□ 0.64
CLK1-205ENST00000434813 EPAS1Q99814 870 aa19.03■□□□□ 0.64
CLK1-205ENST00000434813 STN1Q9H668 368 aaKnown RBP19.03■□□□□ 0.64
CLK1-205ENST00000434813 DCLRE1BQ9H816 532 aa19.03■□□□□ 0.64
CLK1-205ENST00000434813 CHST12Q9NRB3 414 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms