RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 EML5Q05BV3 1969 aa5.97□□□□□ -1.45
HMGB3P24-201ENST00000433260 A0A1W2PQJ5 194 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 TCRBV21S2A2A0A5A6 115 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 TYW5A2RUC4 315 aaKnown RBP5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 SIGLEC16A6NMB1 481 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 F5H5T6 163 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 I6L893 689 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 ERVH48-1M5A8F1 160 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 DDX3XO00571 662 aaKnown RBP eCLIP5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 DCLK1O15075 740 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 ADAM23O75077 832 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 LATS1O95835 1130 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 F9P00740 461 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 SERPING1P05155 500 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 TDGF1P13385 188 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 HLA-EP13747 358 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 HOXB2P14652 356 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 GPD1P21695 349 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 HOXD9P28356 352 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 HLA-FP30511 346 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 NTSR1P30989 418 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 NBL1P41271 181 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 CXCR3P49682 368 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 MRE11P49959 708 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 ATP1A2P50993 1020 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 ZNF445P59923 1031 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 RPL7AP62424 266 aaKnown RBP5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 ZBED6P86452 979 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 NNTQ13423 1086 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 EIF4EBP2Q13542 120 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 AUHQ13825 339 aaKnown RBP5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 SIM2Q14190 667 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 CRY1Q16526 586 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 ZNF528Q3MIS6 628 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 SLC25A52Q3SY17 297 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 FIGNQ5HY92 759 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 EOGTQ5NDL2 527 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 OTUD1Q5VV17 481 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 MBLAC2Q68D91 279 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 ANO7Q6IWH7 933 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 KIAA1211LQ6NV74 962 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 FBXL22Q6P050 247 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 DNAJC24Q6P3W2 148 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 DCUN1D2Q6PH85 259 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 CEP68Q76N32 757 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 ASCL5Q7RTU5 278 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 TMC6Q7Z403 805 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 ANKS1BQ7Z6G8 1248 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 LONP2Q86WA8 852 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 CIR1Q86X95 450 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 FAM131BQ86XD5 332 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 APCDD1Q8J025 514 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 DCLK2Q8N568 766 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 CAMKK1Q8N5S9 505 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 DEFB119Q8N690 84 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 HJURPQ8NCD3 748 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 TSTD1Q8NFU3 115 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 CYB5D2Q8WUJ1 264 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 UCMAQ8WVF2 138 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 HMGB4Q8WW32 186 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 RLN3Q8WXF3 142 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 NKD2Q969F2 451 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 NT5C3BQ969T7 300 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 ACDQ96AP0 544 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 PRICKLE1Q96MT3 831 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 RPRD1AQ96P16 312 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 IER2Q9BTL4 223 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 SLC2A11Q9BYW1 496 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 TTYH3Q9C0H2 523 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 SLC6A17Q9H1V8 727 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 MTG2Q9H4K7 406 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 POLMQ9NP87 494 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 PRMT8Q9NR22 394 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 ELOVL2Q9NXB9 296 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 CACNA2D2Q9NY47 1150 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 RRN3Q9NYV6 651 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 BCCIPQ9P287 314 aaKnown RBP eCLIP5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 CNOT8Q9UFF9 292 aaKnown RBP5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 GGA2Q9UJY4 613 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 MMP17Q9ULZ9 603 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 SLC27A6Q9Y2P4 619 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 STON1Q9Y6Q2 735 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 ZNF318Q5VUA4 2279 aa5.96□□□□□ -1.46
HMGB3P24-201ENST00000433260 CEP192Q8TEP8 1941 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 MYO18AQ92614 2054 aaKnown RBP5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 A0A087X0T9 212 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 ANKRD62A6NC57 917 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 C2CD4BA6NLJ0 364 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 GFRA2O00451 464 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 AXIN1O15169 862 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 CCP110O43303 1012 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 TIMM44O43615 452 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 RTN2O75298 545 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 CNTN5O94779 1100 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 LUC7L3O95232 432 aaKnown RBP5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 APBB3O95704 486 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 GYPCP04921 128 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 EPHX1P07099 455 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 TPM1P09493 284 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms