RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 SHC2P98077 582 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 CAMK1Q14012 370 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 MFSD13AQ14CX5 517 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 GPR68Q15743 365 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 ERCC6LQ2NKX8 1250 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 LCE4AQ5TA78 99 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 SPATA1Q5VX52 437 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 MTFR2Q6P444 385 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 CRIP3Q6Q6R5 217 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 PCSK4Q6UW60 755 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 TMTC3Q6ZXV5 915 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 ZNF627Q7L945 461 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 GALNT7Q86SF2 657 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 ADPRHL1Q8NDY3 354 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 SRFBP1Q8NEF9 429 aaKnown RBP3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 RFWD2Q8NHY2 731 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 NFKBIDQ8NI38 313 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 LARP4BQ92615 738 aaKnown RBP3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 SH3KBP1Q96B97 665 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 HIC2Q96JB3 615 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 GPR78Q96P69 363 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 NR1H4Q96RI1 486 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 HDHD5Q9BXW7 423 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 LMAN2LQ9H0V9 348 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 SFXN1Q9H9B4 322 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 HCN3Q9P1Z3 774 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 TBC1D14Q9P2M4 693 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 LRIT1Q9P2V4 623 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 KLQ9UEF7 1012 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 SERGEFQ9UGK8 458 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 VPS4AQ9UN37 437 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 SLC45A1Q9Y2W3 748 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 MYO15BQ96JP2 1530 aa3.46□□□□□ -1.86
HMGB1P27-201ENST00000431429 TEX22C9J3V5 150 aa3.46□□□□□ -1.86
HMGB1P27-201ENST00000431429 MCIDASD6RGH6 385 aa3.46□□□□□ -1.86
HMGB1P27-201ENST00000431429 CLEC3BP05452 202 aa3.46□□□□□ -1.86
HMGB1P27-201ENST00000431429 ALDOCP09972 364 aaKnown RBP3.46□□□□□ -1.86
HMGB1P27-201ENST00000431429 TGM2P21980 687 aa3.46□□□□□ -1.86
HMGB1P27-201ENST00000431429 PROZP22891 400 aa3.46□□□□□ -1.86
HMGB1P27-201ENST00000431429 PSMA4P25789 261 aaKnown RBP3.46□□□□□ -1.86
HMGB1P27-201ENST00000431429 RGS2P41220 211 aa3.46□□□□□ -1.86
HMGB1P27-201ENST00000431429 SOX2P48431 317 aa3.46□□□□□ -1.86
HMGB1P27-201ENST00000431429 RPS6KA3P51812 740 aa3.46□□□□□ -1.86
HMGB1P27-201ENST00000431429 COPB1P53618 953 aaKnown RBP3.46□□□□□ -1.86
HMGB1P27-201ENST00000431429 ERV3-1Q14264 604 aa3.46□□□□□ -1.86
HMGB1P27-201ENST00000431429 CNGA3Q16281 694 aa3.46□□□□□ -1.86
HMGB1P27-201ENST00000431429 GXYLT1Q4G148 440 aa3.46□□□□□ -1.86
HMGB1P27-201ENST00000431429 SH2D4BQ5SQS7 431 aa3.46□□□□□ -1.86
HMGB1P27-201ENST00000431429 VWA5B1Q5TIE3 1220 aa3.46□□□□□ -1.86
HMGB1P27-201ENST00000431429 HECTD2Q5U5R9 776 aa3.46□□□□□ -1.86
HMGB1P27-201ENST00000431429 NAPEPLDQ6IQ20 393 aa3.46□□□□□ -1.86
HMGB1P27-201ENST00000431429 CEP85Q6P2H3 762 aa3.46□□□□□ -1.86
HMGB1P27-201ENST00000431429 TRIM72Q6ZMU5 477 aa3.46□□□□□ -1.86
HMGB1P27-201ENST00000431429 DCDC5Q6ZRR9 648 aa3.46□□□□□ -1.86
HMGB1P27-201ENST00000431429 TFAP2DQ7Z6R9 452 aa3.46□□□□□ -1.86
HMGB1P27-201ENST00000431429 PAQR4Q8N4S7 273 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P27-201ENST00000431429 AMER2Q8N7J2 671 aa3.46□□□□□ -1.86
HMGB1P27-201ENST00000431429 ZNF366Q8N895 744 aa3.46□□□□□ -1.86
HMGB1P27-201ENST00000431429 OR52N4Q8NGI2 321 aa3.46□□□□□ -1.86
HMGB1P27-201ENST00000431429 C2CD4CQ8TF44 421 aa3.46□□□□□ -1.86
HMGB1P27-201ENST00000431429 STAMQ92783 540 aa3.46□□□□□ -1.86
HMGB1P27-201ENST00000431429 SERINC2Q96SA4 455 aa3.46□□□□□ -1.86
HMGB1P27-201ENST00000431429 LBHD1Q9BQE6 289 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P27-201ENST00000431429 ADGRE3Q9BY15 652 aa3.46□□□□□ -1.86
HMGB1P27-201ENST00000431429 CTDSP1Q9GZU7 261 aa3.46□□□□□ -1.86
HMGB1P27-201ENST00000431429 INTS2Q9H0H0 1204 aaKnown RBP3.46□□□□□ -1.86
HMGB1P27-201ENST00000431429 MLXIPLQ9NP71 852 aa3.46□□□□□ -1.86
HMGB1P27-201ENST00000431429 TMEM248Q9NWD8 314 aa3.46□□□□□ -1.86
HMGB1P27-201ENST00000431429 CNOT7Q9UIV1 285 aaKnown RBP3.46□□□□□ -1.86
HMGB1P27-201ENST00000431429 FBXO2Q9UK22 296 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P27-201ENST00000431429 CCNL1Q9UK58 526 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P27-201ENST00000431429 DTX4Q9Y2E6 619 aa3.46□□□□□ -1.86
HMGB1P27-201ENST00000431429 RPS6KL1Q9Y6S9 549 aa3.46□□□□□ -1.86
HMGB1P27-201ENST00000431429 PI4KAP2A4QPH2 592 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 TTC34A8MYJ7 566 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 KCNJ18B7U540 433 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 TAF4O00268 1085 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 RRHO14718 337 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 DSCR3O14972 297 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 MATN3O15232 486 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 TGFB1I1O43294 461 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 MLYCDO95822 493 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 SCGB1D1O95968 90 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 ADRB1P08588 477 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 WEE2P0C1S8 567 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 INSRRP14616 1297 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 PKMP14618 531 aaKnown RBP3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 HOXB9P17482 250 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 CHMP24386 653 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 GGT5P36269 586 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 CCR9P51686 369 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 CACNA2D1P54289 1103 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 RPP30P78346 268 aaKnown RBP3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 ARHGAP8P85298 464 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 HOXA4Q00056 320 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 RHAGQ02094 409 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 ZBTB16Q05516 673 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 PRKG2Q13237 762 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 SLC14A1Q13336 389 aa3.45□□□□□ -1.86
HMGB1P27-201ENST00000431429 ALKBH1Q13686 389 aaKnown RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms