RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 A0A1W2PPC4 97 aa15.4■□□□□ 0.06
MSH5-208ENST00000429846 E5RJQ4 531 aa15.4■□□□□ 0.06
MSH5-208ENST00000429846 LETM1O95202 739 aaPredicted RBP15.4■□□□□ 0.06
MSH5-208ENST00000429846 TRUB2O95900 331 aaKnown RBP15.4■□□□□ 0.06
MSH5-208ENST00000429846 IGHV4-34P06331 123 aa15.4■□□□□ 0.06
MSH5-208ENST00000429846 SLC2A3P11169 496 aa15.4■□□□□ 0.06
MSH5-208ENST00000429846 GNA15P30679 374 aa15.4■□□□□ 0.06
MSH5-208ENST00000429846 CTSKP43235 329 aa15.4■□□□□ 0.06
MSH5-208ENST00000429846 ECT2LQ008S8 904 aa15.4■□□□□ 0.06
MSH5-208ENST00000429846 SCAPQ12770 1279 aa15.4■□□□□ 0.06
MSH5-208ENST00000429846 MTA1Q13330 715 aa15.4■□□□□ 0.06
MSH5-208ENST00000429846 FSCBQ5H9T9 825 aa15.4■□□□□ 0.06
MSH5-208ENST00000429846 C9orf64Q5T6V5 341 aa15.4■□□□□ 0.06
MSH5-208ENST00000429846 TTC39BQ5VTQ0 682 aaPredicted RBP15.4■□□□□ 0.06
MSH5-208ENST00000429846 SYPL2Q5VXT5 272 aa15.4■□□□□ 0.06
MSH5-208ENST00000429846 SLCO6A1Q86UG4 719 aa15.4■□□□□ 0.06
MSH5-208ENST00000429846 DHX40Q8IX18 779 aaKnown RBP15.4■□□□□ 0.06
MSH5-208ENST00000429846 LGI2Q8N0V4 545 aa15.4■□□□□ 0.06
MSH5-208ENST00000429846 GALNT15Q8N3T1 639 aa15.4■□□□□ 0.06
MSH5-208ENST00000429846 ATP6V0D2Q8N8Y2 350 aa15.4■□□□□ 0.06
MSH5-208ENST00000429846 ZNF606Q8WXB4 792 aa15.4■□□□□ 0.06
MSH5-208ENST00000429846 MYEOVQ96EZ4 313 aa15.4■□□□□ 0.06
MSH5-208ENST00000429846 ORAI3Q9BRQ5 295 aa15.4■□□□□ 0.06
MSH5-208ENST00000429846 THAP9Q9H5L6 903 aa15.4■□□□□ 0.06
MSH5-208ENST00000429846 UBE2TQ9NPD8 197 aaPredicted RBP15.4■□□□□ 0.06
MSH5-208ENST00000429846 TOR4AQ9NXH8 423 aa15.4■□□□□ 0.06
MSH5-208ENST00000429846 SLC12A6Q9UHW9 1150 aa15.4■□□□□ 0.06
MSH5-208ENST00000429846 WDFY3Q8IZQ1 3526 aa15.4■□□□□ 0.06
MSH5-208ENST00000429846 A0A1W2PP55 124 aa15.39■□□□□ 0.05
MSH5-208ENST00000429846 F5H5T6 163 aa15.39■□□□□ 0.05
MSH5-208ENST00000429846 VILLO15195 856 aa15.39■□□□□ 0.05
MSH5-208ENST00000429846 MID1O15344 667 aa15.39■□□□□ 0.05
MSH5-208ENST00000429846 THAP12O43422 761 aa15.39■□□□□ 0.05
MSH5-208ENST00000429846 TNFSF14O43557 240 aa15.39■□□□□ 0.05
MSH5-208ENST00000429846 ADH1BP00325 375 aa15.39■□□□□ 0.05
MSH5-208ENST00000429846 GLI1P08151 1106 aa15.39■□□□□ 0.05
MSH5-208ENST00000429846 TACR2P21452 398 aa15.39■□□□□ 0.05
MSH5-208ENST00000429846 NNMTP40261 264 aa15.39■□□□□ 0.05
MSH5-208ENST00000429846 GALCP54803 685 aa15.39■□□□□ 0.05
MSH5-208ENST00000429846 OXCT1P55809 520 aa15.39■□□□□ 0.05
MSH5-208ENST00000429846 STX17P56962 302 aa15.39■□□□□ 0.05
MSH5-208ENST00000429846 C21orf59P57076 290 aa15.39■□□□□ 0.05
MSH5-208ENST00000429846 SULT2A1Q06520 285 aa15.39■□□□□ 0.05
MSH5-208ENST00000429846 PDCLQ13371 301 aa15.39■□□□□ 0.05
MSH5-208ENST00000429846 ELAVL3Q14576 367 aaKnown RBP15.39■□□□□ 0.05
MSH5-208ENST00000429846 RAP1GAP2Q684P5 730 aa15.39■□□□□ 0.05
MSH5-208ENST00000429846 DENND1BQ6P3S1 775 aa15.39■□□□□ 0.05
MSH5-208ENST00000429846 TRIM65Q6PJ69 517 aa15.39■□□□□ 0.05
MSH5-208ENST00000429846 TMPRSS7Q7RTY8 843 aa15.39■□□□□ 0.05
MSH5-208ENST00000429846 MMAAQ8IVH4 418 aaKnown RBP15.39■□□□□ 0.05
MSH5-208ENST00000429846 CFAP52Q8N1V2 620 aa15.39■□□□□ 0.05
MSH5-208ENST00000429846 OR2T34Q8NGX1 318 aa15.39■□□□□ 0.05
MSH5-208ENST00000429846 OMDQ99983 421 aa15.39■□□□□ 0.05
MSH5-208ENST00000429846 SRRTQ9BXP5 876 aaKnown RBP15.39■□□□□ 0.05
MSH5-208ENST00000429846 MTG2Q9H4K7 406 aa15.39■□□□□ 0.05
MSH5-208ENST00000429846 CCDC86Q9H6F5 360 aaKnown RBP15.39■□□□□ 0.05
MSH5-208ENST00000429846 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.39■□□□□ 0.05
MSH5-208ENST00000429846 SERGEFQ9UGK8 458 aa15.39■□□□□ 0.05
MSH5-208ENST00000429846 XPO7Q9UIA9 1087 aaKnown RBP15.39■□□□□ 0.05
MSH5-208ENST00000429846 RALYQ9UKM9 306 aaKnown RBP15.39■□□□□ 0.05
MSH5-208ENST00000429846 SPEGQ15772 3267 aa15.39■□□□□ 0.05
MSH5-208ENST00000429846 ACACAQ13085 2346 aa15.39■□□□□ 0.05
MSH5-208ENST00000429846 A0A1B0GVM2 712 aa15.38■□□□□ 0.05
MSH5-208ENST00000429846 TCAF2A6NFQ2 919 aa15.38■□□□□ 0.05
MSH5-208ENST00000429846 FAM47DPA6NHR8 397 aa15.38■□□□□ 0.05
MSH5-208ENST00000429846 TTC34A8MYJ7 566 aa15.38■□□□□ 0.05
MSH5-208ENST00000429846 KCNU1A8MYU2 1149 aa15.38■□□□□ 0.05
MSH5-208ENST00000429846 H0Y8X5 98 aa15.38■□□□□ 0.05
MSH5-208ENST00000429846 TAF4O00268 1085 aa15.38■□□□□ 0.05
MSH5-208ENST00000429846 BIN1O00499 593 aa15.38■□□□□ 0.05
MSH5-208ENST00000429846 RNASEH2AO75792 299 aaKnown RBP15.38■□□□□ 0.05
MSH5-208ENST00000429846 ATXN1LP0C7T5 689 aaKnown RBP15.38■□□□□ 0.05
MSH5-208ENST00000429846 ABCB4P21439 1286 aa15.38■□□□□ 0.05
MSH5-208ENST00000429846 C5AR1P21730 350 aa15.38■□□□□ 0.05
MSH5-208ENST00000429846 CCR5P51681 352 aa15.38■□□□□ 0.05
MSH5-208ENST00000429846 EIF4EBP2Q13542 120 aaPredicted RBP15.38■□□□□ 0.05
MSH5-208ENST00000429846 ZC3H12AQ5D1E8 599 aaKnown RBP15.38■□□□□ 0.05
MSH5-208ENST00000429846 RABGAP1LQ5R372 815 aa15.38■□□□□ 0.05
MSH5-208ENST00000429846 NCEH1Q6PIU2 408 aa15.38■□□□□ 0.05
MSH5-208ENST00000429846 LAYNQ6UX15 382 aa15.38■□□□□ 0.05
MSH5-208ENST00000429846 MMS22LQ6ZRQ5 1243 aa15.38■□□□□ 0.05
MSH5-208ENST00000429846 SND1Q7KZF4 910 aaKnown RBP eCLIP15.38■□□□□ 0.05
MSH5-208ENST00000429846 PPP1R9BQ96SB3 815 aa15.38■□□□□ 0.05
MSH5-208ENST00000429846 NEUROG2Q9H2A3 272 aa15.38■□□□□ 0.05
MSH5-208ENST00000429846 ASNSD1Q9NWL6 643 aa15.38■□□□□ 0.05
MSH5-208ENST00000429846 CYTH4Q9UIA0 394 aa15.38■□□□□ 0.05
MSH5-208ENST00000429846 LHX6Q9UPM6 363 aa15.38■□□□□ 0.05
MSH5-208ENST00000429846 BTBD3Q9Y2F9 522 aa15.38■□□□□ 0.05
MSH5-208ENST00000429846 DMXL2Q8TDJ6 3036 aa15.37■□□□□ 0.05
MSH5-208ENST00000429846 A0A1B0GTQ1 180 aa15.37■□□□□ 0.05
MSH5-208ENST00000429846 GTPBP10A4D1E9 387 aaKnown RBP15.37■□□□□ 0.05
MSH5-208ENST00000429846 C10orf142B7Z368 130 aa15.37■□□□□ 0.05
MSH5-208ENST00000429846 YKT6O15498 198 aa15.37■□□□□ 0.05
MSH5-208ENST00000429846 HSF2BPO75031 334 aa15.37■□□□□ 0.05
MSH5-208ENST00000429846 CCR1P32246 355 aa15.37■□□□□ 0.05
MSH5-208ENST00000429846 SLC8A1P32418 973 aa15.37■□□□□ 0.05
MSH5-208ENST00000429846 CTSOP43234 321 aaPredicted RBP15.37■□□□□ 0.05
MSH5-208ENST00000429846 VASPP50552 380 aaPredicted RBP15.37■□□□□ 0.05
MSH5-208ENST00000429846 PLK1P53350 603 aa15.37■□□□□ 0.05
MSH5-208ENST00000429846 CDK17Q00537 523 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms