RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 KLRC2P26717 231 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 PLIN5Q00G26 463 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 FASTKQ14296 549 aaKnown RBP13.04□□□□□ -0.32
LDB3-205ENST00000429277 INTS11Q5TA45 600 aaKnown RBP13.04□□□□□ -0.32
LDB3-205ENST00000429277 LRRC38Q5VT99 294 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 TLK2Q86UE8 772 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 FAM126BQ8IXS8 530 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 DEFB107AQ8IZN7 70 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 METTL6Q8TCB7 284 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 BSNDQ8WZ55 320 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 ZFRQ96KR1 1074 aaKnown RBP13.04□□□□□ -0.32
LDB3-205ENST00000429277 C9orf16Q9BUW7 83 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 NEK6Q9HC98 313 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 ASTN2O75129 1339 aaPredicted RBP13.04□□□□□ -0.32
LDB3-205ENST00000429277 TECPR2O15040 1411 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 ATG7O95352 703 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 ERBB2P04626 1255 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 RAG1P15918 1043 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 SERPINH1P50454 418 aaKnown RBP13.04□□□□□ -0.32
LDB3-205ENST00000429277 IL5RAQ01344 420 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 FRG1Q14331 258 aaKnown RBP13.04□□□□□ -0.32
LDB3-205ENST00000429277 INAQ16352 499 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 NBPF12Q5TAG4 269 aaPredicted RBP13.04□□□□□ -0.32
LDB3-205ENST00000429277 FAM171A1Q5VUB5 890 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 C11orf74Q86VG3 221 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 KRT73Q86Y46 540 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 AADATQ8N5Z0 425 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 USP7Q93009 1102 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 PGM2Q96G03 612 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 TSC22D4Q9Y3Q8 395 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 NWD1Q149M9 1564 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 ENO4A6NNW6 628 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 SLITRK3O94933 977 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 C2CD6Q53TS8 623 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 ZNF470Q6ECI4 717 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 CCDC149Q6ZUS6 474 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 SPPL2AQ8TCT8 520 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 DNAJB3Q8WWF6 145 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 TATDN2Q93075 761 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 SLC35C1Q96A29 364 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 IL22Q9GZX6 179 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 CPA4Q9UI42 421 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 TFR2Q9UP52 801 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 DUSP10Q9Y6W6 482 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 SMIM22K7EJ46 135 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 NOS2P35228 1153 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 RPL3P39023 403 aaKnown RBP13.03□□□□□ -0.32
LDB3-205ENST00000429277 NKAPQ8N5F7 415 aaKnown RBP13.03□□□□□ -0.32
LDB3-205ENST00000429277 BBS4Q96RK4 519 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 BTBD10Q9BSF8 475 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 C2orf49Q9BVC5 232 aaPredicted RBP13.03□□□□□ -0.32
LDB3-205ENST00000429277 MID1IP1Q9NPA3 183 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 ATAD3AQ9NVI7 634 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 ADAM28Q9UKQ2 775 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 AGLP35573 1532 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 DCCP43146 1447 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 MRASO14807 208 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 MED26O95402 600 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 ZNF286BP0CG31 522 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 YBX3P16989 372 aaKnown RBP eCLIP13.03□□□□□ -0.32
LDB3-205ENST00000429277 ME2P23368 584 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 PPM1LQ5SGD2 360 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 FAM228AQ86W67 206 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 DEFB106AQ8N104 65 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 KIAA0895Q8NCT3 520 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 ADI1Q9BV57 179 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 FAM126AQ9BYI3 521 aaPredicted RBP13.03□□□□□ -0.32
LDB3-205ENST00000429277 SLC39A8Q9C0K1 460 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 XPNPEP3Q9NQH7 507 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 ZMYND8Q9ULU4 1186 aaPredicted RBP13.03□□□□□ -0.32
LDB3-205ENST00000429277 ZNF862O60290 1169 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 FAM20BO75063 409 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 SEC22BO75396 215 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 ENDOD1O94919 500 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 ITGB6P18564 788 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 NOS3P29474 1203 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 MMP13P45452 471 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 BMPR2Q13873 1038 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 TIMM50Q3ZCQ8 353 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 ZCCHC9Q8N567 271 aaKnown RBP13.03□□□□□ -0.32
LDB3-205ENST00000429277 PPP1R14AQ96A00 147 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 HSFY1Q96LI6 401 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 EPB41L4BQ9H329 900 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 OPTCQ9UBM4 332 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 PSME2Q9UL46 239 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 ENTPD4Q9Y227 616 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 CHADO15335 359 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 GNRH1P01148 92 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 ETS1P14921 441 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 MYL12AP19105 171 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 INHBEP58166 350 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 FAM187BQ17R55 369 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 RIPOR1Q6ZS17 1223 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 LGI2Q8N0V4 545 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 MED8Q96G25 268 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 OXNAD1Q96HP4 312 aaPredicted RBP13.03□□□□□ -0.32
LDB3-205ENST00000429277 GINS4Q9BRT9 223 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 ATXN3LQ9H3M9 355 aa13.03□□□□□ -0.32
LDB3-205ENST00000429277 MEI4A8MW99 385 aa13.02□□□□□ -0.32
LDB3-205ENST00000429277 RECQL5O94762 991 aaPredicted RBP13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms