RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 VAV1P15498 845 aa16.05■□□□□ 0.16
SEC13-210ENST00000428626 PON1P27169 355 aa16.05■□□□□ 0.16
SEC13-210ENST00000428626 STK19P49842 368 aaPredicted RBP16.05■□□□□ 0.16
SEC13-210ENST00000428626 AFF3P51826 1226 aaKnown RBP16.05■□□□□ 0.16
SEC13-210ENST00000428626 HNRNPDQ14103 355 aaKnown RBP16.05■□□□□ 0.16
SEC13-210ENST00000428626 ARID5BQ14865 1188 aa16.05■□□□□ 0.16
SEC13-210ENST00000428626 ZNF423Q2M1K9 1284 aa16.05■□□□□ 0.16
SEC13-210ENST00000428626 DPY19L2P1Q6NXN4 242 aa16.05■□□□□ 0.16
SEC13-210ENST00000428626 CHSY1Q86X52 802 aa16.05■□□□□ 0.16
SEC13-210ENST00000428626 DEFB106AQ8N104 65 aa16.05■□□□□ 0.16
SEC13-210ENST00000428626 OR52K2Q8NGK3 314 aa16.05■□□□□ 0.16
SEC13-210ENST00000428626 ADAMTS14Q8WXS8 1223 aa16.05■□□□□ 0.16
SEC13-210ENST00000428626 ZCCHC14Q8WYQ9 949 aaKnown RBP16.05■□□□□ 0.16
SEC13-210ENST00000428626 RPL10LQ96L21 214 aaKnown RBP16.05■□□□□ 0.16
SEC13-210ENST00000428626 SLC2A13Q96QE2 648 aa16.05■□□□□ 0.16
SEC13-210ENST00000428626 THAP9Q9H5L6 903 aa16.05■□□□□ 0.16
SEC13-210ENST00000428626 OSGEPQ9NPF4 335 aa16.05■□□□□ 0.16
SEC13-210ENST00000428626 APEX2Q9UBZ4 518 aa16.05■□□□□ 0.16
SEC13-210ENST00000428626 PTPRBP23467 1997 aa16.05■□□□□ 0.16
SEC13-210ENST00000428626 ITIH6Q6UXX5 1313 aa16.04■□□□□ 0.16
SEC13-210ENST00000428626 A0A1W2PP55 124 aa16.04■□□□□ 0.16
SEC13-210ENST00000428626 KCNU1A8MYU2 1149 aa16.04■□□□□ 0.16
SEC13-210ENST00000428626 H0Y626 953 aa16.04■□□□□ 0.16
SEC13-210ENST00000428626 GRAP2O75791 330 aa16.04■□□□□ 0.16
SEC13-210ENST00000428626 TRIM16O95361 564 aa16.04■□□□□ 0.16
SEC13-210ENST00000428626 CER1O95813 267 aa16.04■□□□□ 0.16
SEC13-210ENST00000428626 APOEP02649 317 aa16.04■□□□□ 0.16
SEC13-210ENST00000428626 CD27P26842 260 aa16.04■□□□□ 0.16
SEC13-210ENST00000428626 MZF1P28698 734 aaPredicted RBP16.04■□□□□ 0.16
SEC13-210ENST00000428626 USP8P40818 1118 aa16.04■□□□□ 0.16
SEC13-210ENST00000428626 METAP1P53582 386 aa16.04■□□□□ 0.16
SEC13-210ENST00000428626 GALCP54803 685 aa16.04■□□□□ 0.16
SEC13-210ENST00000428626 ST8SIA6P61647 398 aa16.04■□□□□ 0.16
SEC13-210ENST00000428626 KCNJ12Q14500 433 aa16.04■□□□□ 0.16
SEC13-210ENST00000428626 CST6Q15828 149 aa16.04■□□□□ 0.16
SEC13-210ENST00000428626 TTC31Q49AM3 519 aaPredicted RBP16.04■□□□□ 0.16
SEC13-210ENST00000428626 OTUD1Q5VV17 481 aaPredicted RBP16.04■□□□□ 0.16
SEC13-210ENST00000428626 ENOSF1Q7L5Y1 443 aa16.04■□□□□ 0.16
SEC13-210ENST00000428626 GLRX5Q86SX6 157 aa16.04■□□□□ 0.16
SEC13-210ENST00000428626 CREBRFQ8IUR6 639 aa16.04■□□□□ 0.16
SEC13-210ENST00000428626 MMAAQ8IVH4 418 aaKnown RBP16.04■□□□□ 0.16
SEC13-210ENST00000428626 AADATQ8N5Z0 425 aa16.04■□□□□ 0.16
SEC13-210ENST00000428626 ZNF557Q8N988 423 aaPredicted RBP16.04■□□□□ 0.16
SEC13-210ENST00000428626 KDM1BQ8NB78 822 aa16.04■□□□□ 0.16
SEC13-210ENST00000428626 SETD7Q8WTS6 366 aaKnown RBP16.04■□□□□ 0.16
SEC13-210ENST00000428626 PTPRN2Q92932 1015 aa16.04■□□□□ 0.16
SEC13-210ENST00000428626 IGSF8Q969P0 613 aa16.04■□□□□ 0.16
SEC13-210ENST00000428626 BTN2A3PQ96KV6 586 aa16.04■□□□□ 0.16
SEC13-210ENST00000428626 NEUROG2Q9H2A3 272 aa16.04■□□□□ 0.16
SEC13-210ENST00000428626 SGK2Q9HBY8 427 aa16.04■□□□□ 0.16
SEC13-210ENST00000428626 FBXL12Q9NXK8 326 aa16.04■□□□□ 0.16
SEC13-210ENST00000428626 ANKRD6Q9Y2G4 727 aa16.04■□□□□ 0.16
SEC13-210ENST00000428626 PCDHB9Q9Y5E1 797 aa16.04■□□□□ 0.16
SEC13-210ENST00000428626 APC2O95996 2303 aa16.03■□□□□ 0.16
SEC13-210ENST00000428626 CELSR3Q9NYQ7 3312 aa16.03■□□□□ 0.16
SEC13-210ENST00000428626 DOCK9Q9BZ29 2069 aa16.03■□□□□ 0.16
SEC13-210ENST00000428626 SYNJ2BP-COX16A0A087WUM0 186 aa16.03■□□□□ 0.16
SEC13-210ENST00000428626 TYW5A2RUC4 315 aaKnown RBP16.03■□□□□ 0.16
SEC13-210ENST00000428626 TMEM8BA6NDV4 472 aa16.03■□□□□ 0.16
SEC13-210ENST00000428626 FAM47DPA6NHR8 397 aa16.03■□□□□ 0.16
SEC13-210ENST00000428626 H0Y8X5 98 aa16.03■□□□□ 0.16
SEC13-210ENST00000428626 WNT9AO14904 365 aa16.03■□□□□ 0.16
SEC13-210ENST00000428626 ERBB2P04626 1255 aa16.03■□□□□ 0.16
SEC13-210ENST00000428626 WNT1P04628 370 aa16.03■□□□□ 0.16
SEC13-210ENST00000428626 SRPRAP08240 638 aaKnown RBP16.03■□□□□ 0.16
SEC13-210ENST00000428626 PDGFRAP16234 1089 aa16.03■□□□□ 0.16
SEC13-210ENST00000428626 CLCN1P35523 988 aa16.03■□□□□ 0.16
SEC13-210ENST00000428626 GGCXP38435 758 aa16.03■□□□□ 0.16
SEC13-210ENST00000428626 GRIA4P48058 902 aa16.03■□□□□ 0.16
SEC13-210ENST00000428626 ECT2LQ008S8 904 aa16.03■□□□□ 0.16
SEC13-210ENST00000428626 CENPCQ03188 943 aa16.03■□□□□ 0.16
SEC13-210ENST00000428626 EXOC3L4Q17RC7 722 aa16.03■□□□□ 0.16
SEC13-210ENST00000428626 KIAA0895LQ68EN5 471 aa16.03■□□□□ 0.16
SEC13-210ENST00000428626 CXorf57Q6NSI4 855 aaKnown RBP16.03■□□□□ 0.16
SEC13-210ENST00000428626 NCEH1Q6PIU2 408 aa16.03■□□□□ 0.16
SEC13-210ENST00000428626 IL27RAQ6UWB1 636 aa16.03■□□□□ 0.16
SEC13-210ENST00000428626 OLFML1Q6UWY5 402 aa16.03■□□□□ 0.16
SEC13-210ENST00000428626 GBP6Q6ZN66 633 aa16.03■□□□□ 0.16
SEC13-210ENST00000428626 FAM183BPQ6ZVS7 135 aa16.03■□□□□ 0.16
SEC13-210ENST00000428626 USP30Q70CQ3 517 aa16.03■□□□□ 0.16
SEC13-210ENST00000428626 CCAR2Q8N163 923 aaKnown RBP16.03■□□□□ 0.16
SEC13-210ENST00000428626 STK40Q8N2I9 435 aa16.03■□□□□ 0.16
SEC13-210ENST00000428626 C1orf131Q8NDD1 294 aaKnown RBP16.03■□□□□ 0.16
SEC13-210ENST00000428626 ALG14Q96F25 216 aa16.03■□□□□ 0.16
SEC13-210ENST00000428626 SLC6A18Q96N87 628 aa16.03■□□□□ 0.16
SEC13-210ENST00000428626 ANLNQ9NQW6 1124 aa16.03■□□□□ 0.16
SEC13-210ENST00000428626 COX16Q9P0S2 106 aa16.03■□□□□ 0.16
SEC13-210ENST00000428626 KIAA1522Q9P206 1035 aaPredicted RBP16.03■□□□□ 0.16
SEC13-210ENST00000428626 PCDHGC3Q9UN70 934 aa16.03■□□□□ 0.16
SEC13-210ENST00000428626 GOLGA4Q13439 2230 aaKnown RBP16.03■□□□□ 0.16
SEC13-210ENST00000428626 TARSL2A2RTX5 802 aaKnown RBP16.02■□□□□ 0.16
SEC13-210ENST00000428626 I6L893 689 aaPredicted RBP16.02■□□□□ 0.16
SEC13-210ENST00000428626 FOXN3O00409 490 aaPredicted RBP16.02■□□□□ 0.16
SEC13-210ENST00000428626 DKK1O94907 266 aa16.02■□□□□ 0.16
SEC13-210ENST00000428626 FGFR1OPO95684 399 aaKnown RBP16.02■□□□□ 0.16
SEC13-210ENST00000428626 ATXN1LP0C7T5 689 aaKnown RBP16.02■□□□□ 0.16
SEC13-210ENST00000428626 TFE3P19532 575 aaPredicted RBP16.02■□□□□ 0.16
SEC13-210ENST00000428626 SLC8A1P32418 973 aa16.02■□□□□ 0.16
SEC13-210ENST00000428626 CTSKP43235 329 aa16.02■□□□□ 0.16
SEC13-210ENST00000428626 PTPN20Q4JDL3 420 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms