RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 SNX18Q96RF0 628 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 EBNA1BP2Q99848 306 aaKnown RBP5.27□□□□□ -1.57
RIF1-203ENST00000428287 FTHL17Q9BXU8 183 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 ADAMTS10Q9H324 1103 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 MAN1C1Q9NR34 630 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 THG1LQ9NWX6 298 aaKnown RBP5.27□□□□□ -1.57
RIF1-203ENST00000428287 DDX56Q9NY93 547 aaKnown RBP5.27□□□□□ -1.57
RIF1-203ENST00000428287 CLEC11AQ9Y240 323 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 CXorf49A8MYA2 514 aaPredicted RBP5.27□□□□□ -1.57
RIF1-203ENST00000428287 ATE1O95260 518 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 AKR1B1P15121 316 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 SHMT1P34896 483 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 CHI3L2Q15782 390 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 RGS21Q2M5E4 152 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 NSMFQ6X4W1 530 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 CBWD2Q8IUF1 395 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 UNC45BQ8IWX7 931 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 ARFGAP1Q8N6T3 406 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 SLC4A11Q8NBS3 891 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 ANKK1Q8NFD2 765 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 BCL7BQ9BQE9 202 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 MCMBPQ9BTE3 642 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 SMYD3Q9H7B4 428 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 CPNE5Q9HCH3 593 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 ZNF639Q9UID6 485 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 PSME2Q9UL46 239 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 FAF1Q9UNN5 650 aaPredicted RBP5.27□□□□□ -1.57
RIF1-203ENST00000428287 CPQQ9Y646 472 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 FAM170AA1A519 330 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 TXNDC9O14530 226 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 LSM1O15116 133 aaKnown RBP5.26□□□□□ -1.57
RIF1-203ENST00000428287 DHX15O43143 795 aaKnown RBP5.26□□□□□ -1.57
RIF1-203ENST00000428287 CST8O60676 142 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 OCM2P0CE71 109 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 OCMP0CE72 109 aaPredicted RBP5.26□□□□□ -1.57
RIF1-203ENST00000428287 RFC1P35251 1148 aaPredicted RBP5.26□□□□□ -1.57
RIF1-203ENST00000428287 ZBTB17Q13105 803 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 TCHHL1Q5QJ38 904 aaPredicted RBP5.26□□□□□ -1.57
RIF1-203ENST00000428287 ZNF534Q76KX8 674 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 LACC1Q8IV20 430 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 ANKFN1Q8N957 763 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 ABTB1Q969K4 478 aaPredicted RBP5.26□□□□□ -1.57
RIF1-203ENST00000428287 FKBP10Q96AY3 582 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 SLCO4A1Q96BD0 722 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 TMA16Q96EY4 203 aaKnown RBP5.26□□□□□ -1.57
RIF1-203ENST00000428287 RMND5BQ96G75 393 aaPredicted RBP5.26□□□□□ -1.57
RIF1-203ENST00000428287 NUF2Q9BZD4 464 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 APPL1Q9UKG1 709 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 CACNA1HO95180 2353 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 AVILO75366 819 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 C21orf59P57076 290 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 MPP1Q00013 466 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 OTUD4Q01804 1114 aaKnown RBP5.26□□□□□ -1.57
RIF1-203ENST00000428287 DPYSL3Q14195 570 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 FASTKD1Q53R41 847 aaKnown RBP5.26□□□□□ -1.57
RIF1-203ENST00000428287 C6orf52Q5T4I8 152 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.26□□□□□ -1.57
RIF1-203ENST00000428287 ATP2A3Q93084 1043 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 BTN2A3PQ96KV6 586 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 KLF6Q99612 283 aaPredicted RBP5.26□□□□□ -1.57
RIF1-203ENST00000428287 WDR18Q9BV38 432 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 PRUNE2Q8WUY3 3088 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 ARHGEF37A1IGU5 675 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 KRBA1A5PL33 1030 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 TCP10L2B9ZVM9 353 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 F8VP50 259 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 HTRA2O43464 458 aaPredicted RBP5.26□□□□□ -1.57
RIF1-203ENST00000428287 CALB1P05937 261 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 CDC20Q12834 499 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 KCNJ8Q15842 424 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 SAMD3Q8N6K7 520 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 EFCAB1Q9HAE3 211 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 TBC1D22BQ9NU19 505 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 ZNF330Q9Y3S2 320 aaPredicted RBP5.26□□□□□ -1.57
RIF1-203ENST00000428287 COL4A4P53420 1690 aaPredicted RBP5.26□□□□□ -1.57
RIF1-203ENST00000428287 ARHGAP42A6NI28 874 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 CENPBD1B2RD01 187 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 CLDN25C9JDP6 229 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 TRIM24O15164 1050 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 MSI1O43347 362 aaKnown RBP5.26□□□□□ -1.57
RIF1-203ENST00000428287 ADRB2P07550 413 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 GYS1P13807 737 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 ETS1P14921 441 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 ITGB5P18084 799 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 HOXA10P31260 410 aaPredicted RBP5.26□□□□□ -1.57
RIF1-203ENST00000428287 SERPINB6P35237 376 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 PSMC5P62195 406 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 FLOT2Q14254 428 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 SPOCD1Q6ZMY3 1216 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 GSTA5Q7RTV2 222 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 NANOGNBQ7Z5D8 188 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 NSMCE3Q96MG7 304 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 LIN28AQ9H9Z2 209 aaKnown RBP5.26□□□□□ -1.57
RIF1-203ENST00000428287 ALG13Q9NP73 1137 aaKnown RBP5.26□□□□□ -1.57
RIF1-203ENST00000428287 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.26□□□□□ -1.57
RIF1-203ENST00000428287 MARCOQ9UEW3 520 aaPredicted RBP5.26□□□□□ -1.57
RIF1-203ENST00000428287 CD300AQ9UGN4 299 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 A0A1W2PPW3 197 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 BCLAF3A2AJT9 711 aaKnown RBP5.26□□□□□ -1.57
RIF1-203ENST00000428287 FXYD1O00168 92 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms