RNA–Protein interactions for RNA: ENST00000428174.1

CCHCR1-205, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-205ENST00000428174 RETREG1Q9H6L5 497 aa13.24□□□□□ -0.29
CCHCR1-205ENST00000428174 CATSPERBQ9H7T0 1116 aa13.24□□□□□ -0.29
CCHCR1-205ENST00000428174 TBC1D17Q9HA65 648 aa13.24□□□□□ -0.29
CCHCR1-205ENST00000428174 LTB4R2Q9NPC1 389 aa13.24□□□□□ -0.29
CCHCR1-205ENST00000428174 KLHL11Q9NVR0 708 aa13.24□□□□□ -0.29
CCHCR1-205ENST00000428174 DDX56Q9NY93 547 aaKnown RBP13.24□□□□□ -0.29
CCHCR1-205ENST00000428174 CWC15Q9P013 229 aaKnown RBP13.24□□□□□ -0.29
CCHCR1-205ENST00000428174 KIAA1522Q9P206 1035 aaPredicted RBP13.24□□□□□ -0.29
CCHCR1-205ENST00000428174 NDRG2Q9UN36 371 aaKnown RBP13.24□□□□□ -0.29
CCHCR1-205ENST00000428174 SLC27A6Q9Y2P4 619 aa13.24□□□□□ -0.29
CCHCR1-205ENST00000428174 TBC1D3BA6NDS4 549 aa13.23□□□□□ -0.29
CCHCR1-205ENST00000428174 TMEM221A6NGB7 291 aa13.23□□□□□ -0.29
CCHCR1-205ENST00000428174 M0R296 226 aa13.23□□□□□ -0.29
CCHCR1-205ENST00000428174 FGF10O15520 208 aaPredicted RBP13.23□□□□□ -0.29
CCHCR1-205ENST00000428174 KAT7O95251 611 aa13.23□□□□□ -0.29
CCHCR1-205ENST00000428174 FTCDO95954 541 aa13.23□□□□□ -0.29
CCHCR1-205ENST00000428174 KRT1P04264 644 aa13.23□□□□□ -0.29
CCHCR1-205ENST00000428174 RHOCP08134 193 aa13.23□□□□□ -0.29
CCHCR1-205ENST00000428174 GOT1P17174 413 aa13.23□□□□□ -0.29
CCHCR1-205ENST00000428174 DRD1P21728 446 aa13.23□□□□□ -0.29
CCHCR1-205ENST00000428174 KDELR1P24390 212 aa13.23□□□□□ -0.29
CCHCR1-205ENST00000428174 CTNNA2P26232 953 aa13.23□□□□□ -0.29
CCHCR1-205ENST00000428174 TARSP26639 723 aaKnown RBP13.23□□□□□ -0.29
CCHCR1-205ENST00000428174 MAPKAPK2P49137 400 aa13.23□□□□□ -0.29
CCHCR1-205ENST00000428174 ARSEP51690 589 aa13.23□□□□□ -0.29
CCHCR1-205ENST00000428174 MESP2Q0VG99 397 aa13.23□□□□□ -0.29
CCHCR1-205ENST00000428174 LMAN2Q12907 356 aa13.23□□□□□ -0.29
CCHCR1-205ENST00000428174 UBXN2BQ14CS0 331 aa13.23□□□□□ -0.29
CCHCR1-205ENST00000428174 FSCBQ5H9T9 825 aa13.23□□□□□ -0.29
CCHCR1-205ENST00000428174 FSTL4Q6MZW2 842 aa13.23□□□□□ -0.29
CCHCR1-205ENST00000428174 CXorf57Q6NSI4 855 aaKnown RBP13.23□□□□□ -0.29
CCHCR1-205ENST00000428174 RFX8Q6ZV50 586 aa13.23□□□□□ -0.29
CCHCR1-205ENST00000428174 NUDT18Q6ZVK8 323 aa13.23□□□□□ -0.29
CCHCR1-205ENST00000428174 ANKS1BQ7Z6G8 1248 aa13.23□□□□□ -0.29
CCHCR1-205ENST00000428174 NT5DC3Q86UY8 548 aa13.23□□□□□ -0.29
CCHCR1-205ENST00000428174 PHTF2Q8N3S3 785 aa13.23□□□□□ -0.29
CCHCR1-205ENST00000428174 RTL3Q8N8U3 475 aaKnown RBP13.23□□□□□ -0.29
CCHCR1-205ENST00000428174 TERB1Q8NA31 727 aa13.23□□□□□ -0.29
CCHCR1-205ENST00000428174 FAM71BQ8TC56 605 aa13.23□□□□□ -0.29
CCHCR1-205ENST00000428174 WFIKKN2Q8TEU8 576 aa13.23□□□□□ -0.29
CCHCR1-205ENST00000428174 RAPGEF5Q92565 580 aa13.23□□□□□ -0.29
CCHCR1-205ENST00000428174 ALS2CR12Q96Q35 445 aa13.23□□□□□ -0.29
CCHCR1-205ENST00000428174 CALN1Q9BXU9 219 aa13.23□□□□□ -0.29
CCHCR1-205ENST00000428174 EPHX3Q9H6B9 360 aa13.23□□□□□ -0.29
CCHCR1-205ENST00000428174 ABCB8Q9NUT2 735 aa13.23□□□□□ -0.29
CCHCR1-205ENST00000428174 TMEM248Q9NWD8 314 aa13.23□□□□□ -0.29
CCHCR1-205ENST00000428174 DONSONQ9NYP3 566 aa13.23□□□□□ -0.29
CCHCR1-205ENST00000428174 RCOR3Q9P2K3 495 aaPredicted RBP13.23□□□□□ -0.29
CCHCR1-205ENST00000428174 NEU3Q9UQ49 428 aa13.23□□□□□ -0.29
CCHCR1-205ENST00000428174 TBC1D30Q9Y2I9 924 aa13.23□□□□□ -0.29
CCHCR1-205ENST00000428174 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.23□□□□□ -0.29
CCHCR1-205ENST00000428174 PCDHA3Q9Y5H8 950 aa13.23□□□□□ -0.29
CCHCR1-205ENST00000428174 COL4A3Q01955 1670 aa13.22□□□□□ -0.29
CCHCR1-205ENST00000428174 CCDC66A2RUB6 948 aa13.22□□□□□ -0.29
CCHCR1-205ENST00000428174 LRRD1A4D1F6 860 aa13.22□□□□□ -0.29
CCHCR1-205ENST00000428174 GOLGA6L9A6NEM1 432 aa13.22□□□□□ -0.29
CCHCR1-205ENST00000428174 FAM170BA6NMN3 283 aa13.22□□□□□ -0.29
CCHCR1-205ENST00000428174 WASH4PA8MWX3 477 aa13.22□□□□□ -0.29
CCHCR1-205ENST00000428174 EGFP01133 1207 aa13.22□□□□□ -0.29
CCHCR1-205ENST00000428174 CD48P09326 243 aa13.22□□□□□ -0.29
CCHCR1-205ENST00000428174 PABPC1P11940 636 aaKnown RBP13.22□□□□□ -0.29
CCHCR1-205ENST00000428174 ERCC2P18074 760 aa13.22□□□□□ -0.29
CCHCR1-205ENST00000428174 AMPD1P23109 780 aa13.22□□□□□ -0.29
CCHCR1-205ENST00000428174 HLA-FP30511 346 aa13.22□□□□□ -0.29
CCHCR1-205ENST00000428174 OR1E1P30953 314 aa13.22□□□□□ -0.29
CCHCR1-205ENST00000428174 CD70P32970 193 aa13.22□□□□□ -0.29
CCHCR1-205ENST00000428174 CTNNA1P35221 906 aaKnown RBP13.22□□□□□ -0.29
CCHCR1-205ENST00000428174 MMRN1Q13201 1228 aa13.22□□□□□ -0.29
CCHCR1-205ENST00000428174 DPYSL3Q14195 570 aa13.22□□□□□ -0.29
CCHCR1-205ENST00000428174 GEN1Q17RS7 908 aa13.22□□□□□ -0.29
CCHCR1-205ENST00000428174 C6orf118Q5T5N4 469 aa13.22□□□□□ -0.29
CCHCR1-205ENST00000428174 SETD3Q86TU7 594 aaPredicted RBP13.22□□□□□ -0.29
CCHCR1-205ENST00000428174 NLRP14Q86W24 1093 aa13.22□□□□□ -0.29
CCHCR1-205ENST00000428174 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.22□□□□□ -0.29
CCHCR1-205ENST00000428174 FLCNQ8NFG4 579 aa13.22□□□□□ -0.29
CCHCR1-205ENST00000428174 TRIM58Q8NG06 486 aa13.22□□□□□ -0.29
CCHCR1-205ENST00000428174 UBE2Q2Q8WVN8 375 aa13.22□□□□□ -0.29
CCHCR1-205ENST00000428174 TSC1Q92574 1164 aa13.22□□□□□ -0.29
CCHCR1-205ENST00000428174 KRT35Q92764 455 aa13.22□□□□□ -0.29
CCHCR1-205ENST00000428174 LMLNQ96KR4 655 aa13.22□□□□□ -0.29
CCHCR1-205ENST00000428174 CSPG4P5Q96PW8 444 aa13.22□□□□□ -0.29
CCHCR1-205ENST00000428174 ZNF670Q9BS34 389 aa13.22□□□□□ -0.29
CCHCR1-205ENST00000428174 FOXQ1Q9C009 403 aa13.22□□□□□ -0.29
CCHCR1-205ENST00000428174 ZNF212Q9UDV6 495 aa13.22□□□□□ -0.29
CCHCR1-205ENST00000428174 GGA2Q9UJY4 613 aa13.22□□□□□ -0.29
CCHCR1-205ENST00000428174 TECTAO75443 2155 aa13.22□□□□□ -0.29
CCHCR1-205ENST00000428174 A0A0A0MRY4 1105 aa13.21□□□□□ -0.29
CCHCR1-205ENST00000428174 ILVBLA1L0T0 632 aa13.21□□□□□ -0.29
CCHCR1-205ENST00000428174 MIF4GDA9UHW6 222 aaKnown RBP13.21□□□□□ -0.29
CCHCR1-205ENST00000428174 PRRT4C9JH25 899 aa13.21□□□□□ -0.29
CCHCR1-205ENST00000428174 NCAM2O15394 837 aa13.21□□□□□ -0.29
CCHCR1-205ENST00000428174 ZRANB2O95218 330 aaKnown RBP eCLIP13.21□□□□□ -0.29
CCHCR1-205ENST00000428174 PDGFBP01127 241 aaPredicted RBP13.21□□□□□ -0.29
CCHCR1-205ENST00000428174 CSKP41240 450 aa13.21□□□□□ -0.29
CCHCR1-205ENST00000428174 TNFRSF4P43489 277 aa13.21□□□□□ -0.29
CCHCR1-205ENST00000428174 MARCKSL1P49006 195 aa13.21□□□□□ -0.29
CCHCR1-205ENST00000428174 SLC12A1Q13621 1099 aa13.21□□□□□ -0.29
CCHCR1-205ENST00000428174 DPYSQ14117 519 aa13.21□□□□□ -0.29
CCHCR1-205ENST00000428174 LRRC32Q14392 662 aa13.21□□□□□ -0.29
CCHCR1-205ENST00000428174 DMC1Q14565 340 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms