RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 TRMT1Q9NXH9 659 aaKnown RBP15.59■□□□□ 0.09
VARS2-203ENST00000428017 RCOR3Q9P2K3 495 aaPredicted RBP15.59■□□□□ 0.09
VARS2-203ENST00000428017 SLC27A6Q9Y2P4 619 aa15.59■□□□□ 0.09
VARS2-203ENST00000428017 GOLGA6L9A6NEM1 432 aa15.58■□□□□ 0.08
VARS2-203ENST00000428017 FTCDO95954 541 aa15.58■□□□□ 0.08
VARS2-203ENST00000428017 RHOCP08134 193 aa15.58■□□□□ 0.08
VARS2-203ENST00000428017 GOT1P17174 413 aa15.58■□□□□ 0.08
VARS2-203ENST00000428017 HCAR3P49019 387 aa15.58■□□□□ 0.08
VARS2-203ENST00000428017 MAPKAPK2P49137 400 aa15.58■□□□□ 0.08
VARS2-203ENST00000428017 IRAK1P51617 712 aa15.58■□□□□ 0.08
VARS2-203ENST00000428017 ATP13A4Q4VNC1 1196 aa15.58■□□□□ 0.08
VARS2-203ENST00000428017 TMEM196Q5HYL7 178 aa15.58■□□□□ 0.08
VARS2-203ENST00000428017 SETD3Q86TU7 594 aaPredicted RBP15.58■□□□□ 0.08
VARS2-203ENST00000428017 AHI1Q8N157 1196 aa15.58■□□□□ 0.08
VARS2-203ENST00000428017 UBL4BQ8N7F7 174 aa15.58■□□□□ 0.08
VARS2-203ENST00000428017 LRRC57Q8N9N7 239 aa15.58■□□□□ 0.08
VARS2-203ENST00000428017 TERB1Q8NA31 727 aa15.58■□□□□ 0.08
VARS2-203ENST00000428017 TRIM58Q8NG06 486 aa15.58■□□□□ 0.08
VARS2-203ENST00000428017 WFIKKN2Q8TEU8 576 aa15.58■□□□□ 0.08
VARS2-203ENST00000428017 UBE2Q2Q8WVN8 375 aa15.58■□□□□ 0.08
VARS2-203ENST00000428017 P2RY11Q96G91 374 aa15.58■□□□□ 0.08
VARS2-203ENST00000428017 MUC3BQ9H195 1237 aa15.58■□□□□ 0.08
VARS2-203ENST00000428017 PCDH18Q9HCL0 1135 aa15.58■□□□□ 0.08
VARS2-203ENST00000428017 LTB4R2Q9NPC1 389 aa15.58■□□□□ 0.08
VARS2-203ENST00000428017 CWC15Q9P013 229 aaKnown RBP15.58■□□□□ 0.08
VARS2-203ENST00000428017 GGA2Q9UJY4 613 aa15.58■□□□□ 0.08
VARS2-203ENST00000428017 FBXO10Q9UK96 956 aa15.58■□□□□ 0.08
VARS2-203ENST00000428017 CLEC4EQ9ULY5 219 aa15.58■□□□□ 0.08
VARS2-203ENST00000428017 PYCARDQ9ULZ3 195 aa15.58■□□□□ 0.08
VARS2-203ENST00000428017 CAPN6Q9Y6Q1 641 aa15.58■□□□□ 0.08
VARS2-203ENST00000428017 KIF26AQ9ULI4 1882 aaPredicted RBP15.58■□□□□ 0.08
VARS2-203ENST00000428017 CCDC66A2RUB6 948 aa15.57■□□□□ 0.08
VARS2-203ENST00000428017 FAM170BA6NMN3 283 aa15.57■□□□□ 0.08
VARS2-203ENST00000428017 MIF4GDA9UHW6 222 aaKnown RBP15.57■□□□□ 0.08
VARS2-203ENST00000428017 TRIM24O15164 1050 aa15.57■□□□□ 0.08
VARS2-203ENST00000428017 CISD3P0C7P0 127 aa15.57■□□□□ 0.08
VARS2-203ENST00000428017 PABPC1P11940 636 aaKnown RBP15.57■□□□□ 0.08
VARS2-203ENST00000428017 MSNP26038 577 aaKnown RBP15.57■□□□□ 0.08
VARS2-203ENST00000428017 HLA-FP30511 346 aa15.57■□□□□ 0.08
VARS2-203ENST00000428017 HOXC13P31276 330 aa15.57■□□□□ 0.08
VARS2-203ENST00000428017 CTNNA1P35221 906 aaKnown RBP15.57■□□□□ 0.08
VARS2-203ENST00000428017 LMAN2Q12907 356 aa15.57■□□□□ 0.08
VARS2-203ENST00000428017 SLC12A1Q13621 1099 aa15.57■□□□□ 0.08
VARS2-203ENST00000428017 DMC1Q14565 340 aa15.57■□□□□ 0.08
VARS2-203ENST00000428017 E2F5Q15329 346 aa15.57■□□□□ 0.08
VARS2-203ENST00000428017 FBXO43Q4G163 708 aa15.57■□□□□ 0.08
VARS2-203ENST00000428017 DGKKQ5KSL6 1271 aa15.57■□□□□ 0.08
VARS2-203ENST00000428017 RNF43Q68DV7 783 aa15.57■□□□□ 0.08
VARS2-203ENST00000428017 FSTL4Q6MZW2 842 aa15.57■□□□□ 0.08
VARS2-203ENST00000428017 RTL3Q8N8U3 475 aaKnown RBP15.57■□□□□ 0.08
VARS2-203ENST00000428017 UCMAQ8WVF2 138 aa15.57■□□□□ 0.08
VARS2-203ENST00000428017 ZNF670Q9BS34 389 aa15.57■□□□□ 0.08
VARS2-203ENST00000428017 MAK16Q9BXY0 300 aaKnown RBP15.57■□□□□ 0.08
VARS2-203ENST00000428017 FOXQ1Q9C009 403 aa15.57■□□□□ 0.08
VARS2-203ENST00000428017 CIPCQ9C0C6 399 aa15.57■□□□□ 0.08
VARS2-203ENST00000428017 TMEM248Q9NWD8 314 aa15.57■□□□□ 0.08
VARS2-203ENST00000428017 DNAI1Q9UI46 699 aa15.57■□□□□ 0.08
VARS2-203ENST00000428017 TBC1D30Q9Y2I9 924 aa15.57■□□□□ 0.08
VARS2-203ENST00000428017 UNC80Q8N2C7 3258 aa15.56■□□□□ 0.08
VARS2-203ENST00000428017 TIMM44O43615 452 aa15.56■□□□□ 0.08
VARS2-203ENST00000428017 KIF5CO60282 957 aa15.56■□□□□ 0.08
VARS2-203ENST00000428017 RAMP2O60895 175 aa15.56■□□□□ 0.08
VARS2-203ENST00000428017 ZRANB2O95218 330 aaKnown RBP eCLIP15.56■□□□□ 0.08
VARS2-203ENST00000428017 EGFP01133 1207 aa15.56■□□□□ 0.08
VARS2-203ENST00000428017 POLR2EP19388 210 aaKnown RBP15.56■□□□□ 0.08
VARS2-203ENST00000428017 KDELR1P24390 212 aa15.56■□□□□ 0.08
VARS2-203ENST00000428017 CTNNA2P26232 953 aa15.56■□□□□ 0.08
VARS2-203ENST00000428017 TARSP26639 723 aaKnown RBP15.56■□□□□ 0.08
VARS2-203ENST00000428017 CD70P32970 193 aa15.56■□□□□ 0.08
VARS2-203ENST00000428017 ETFBP38117 255 aa15.56■□□□□ 0.08
VARS2-203ENST00000428017 CETN2P41208 172 aa15.56■□□□□ 0.08
VARS2-203ENST00000428017 CSKP41240 450 aa15.56■□□□□ 0.08
VARS2-203ENST00000428017 TNFRSF4P43489 277 aa15.56■□□□□ 0.08
VARS2-203ENST00000428017 DPYSL3Q14195 570 aa15.56■□□□□ 0.08
VARS2-203ENST00000428017 EIF4HQ15056 248 aaKnown RBP15.56■□□□□ 0.08
VARS2-203ENST00000428017 FSCBQ5H9T9 825 aa15.56■□□□□ 0.08
VARS2-203ENST00000428017 RNF219Q5W0B1 726 aaPredicted RBP15.56■□□□□ 0.08
VARS2-203ENST00000428017 ZNF783Q6ZMS7 281 aa15.56■□□□□ 0.08
VARS2-203ENST00000428017 NT5DC3Q86UY8 548 aa15.56■□□□□ 0.08
VARS2-203ENST00000428017 ZNF354CQ86Y25 554 aa15.56■□□□□ 0.08
VARS2-203ENST00000428017 CCDC50Q8IVM0 306 aa15.56■□□□□ 0.08
VARS2-203ENST00000428017 KATNAL2Q8IYT4 538 aa15.56■□□□□ 0.08
VARS2-203ENST00000428017 RCOR2Q8IZ40 523 aa15.56■□□□□ 0.08
VARS2-203ENST00000428017 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.56■□□□□ 0.08
VARS2-203ENST00000428017 WFDC5Q8TCV5 224 aa15.56■□□□□ 0.08
VARS2-203ENST00000428017 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.56■□□□□ 0.08
VARS2-203ENST00000428017 RAPGEF5Q92565 580 aa15.56■□□□□ 0.08
VARS2-203ENST00000428017 PBXIP1Q96AQ6 731 aa15.56■□□□□ 0.08
VARS2-203ENST00000428017 RNF25Q96BH1 459 aaPredicted RBP15.56■□□□□ 0.08
VARS2-203ENST00000428017 RBM41Q96IZ5 413 aaKnown RBP15.56■□□□□ 0.08
VARS2-203ENST00000428017 CSPG4P5Q96PW8 444 aa15.56■□□□□ 0.08
VARS2-203ENST00000428017 OSBPL6Q9BZF3 934 aa15.56■□□□□ 0.08
VARS2-203ENST00000428017 EPHX3Q9H6B9 360 aa15.56■□□□□ 0.08
VARS2-203ENST00000428017 FBRSL1Q9HCM7 1045 aaKnown RBP15.56■□□□□ 0.08
VARS2-203ENST00000428017 VPS28Q9UK41 221 aa15.56■□□□□ 0.08
VARS2-203ENST00000428017 SIT1Q9Y3P8 196 aa15.56■□□□□ 0.08
VARS2-203ENST00000428017 PCDHA3Q9Y5H8 950 aa15.56■□□□□ 0.08
VARS2-203ENST00000428017 TICRRQ7Z2Z1 1910 aa15.56■□□□□ 0.08
VARS2-203ENST00000428017 MYO10Q9HD67 2058 aa15.55■□□□□ 0.08
VARS2-203ENST00000428017 ILVBLA1L0T0 632 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms