RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 USP4Q13107 963 aa12.41□□□□□ -0.42
RFC4-206ENST00000427785 PRKD1Q15139 912 aaPredicted RBP12.41□□□□□ -0.42
RFC4-206ENST00000427785 LRIT3Q3SXY7 679 aa12.41□□□□□ -0.42
RFC4-206ENST00000427785 SLC45A4Q5BKX6 768 aa12.41□□□□□ -0.42
RFC4-206ENST00000427785 ANKRD54Q6NXT1 300 aa12.41□□□□□ -0.42
RFC4-206ENST00000427785 FBXO38Q6PIJ6 1188 aa12.41□□□□□ -0.42
RFC4-206ENST00000427785 POTEHQ6S545 545 aa12.41□□□□□ -0.42
RFC4-206ENST00000427785 GET4Q7L5D6 327 aaPredicted RBP12.41□□□□□ -0.42
RFC4-206ENST00000427785 NLRP14Q86W24 1093 aa12.41□□□□□ -0.42
RFC4-206ENST00000427785 ARHGAP12Q8IWW6 846 aa12.41□□□□□ -0.42
RFC4-206ENST00000427785 CMTM8Q8IZV2 173 aa12.41□□□□□ -0.42
RFC4-206ENST00000427785 CFAP52Q8N1V2 620 aa12.41□□□□□ -0.42
RFC4-206ENST00000427785 TAB3Q8N5C8 712 aaPredicted RBP12.41□□□□□ -0.42
RFC4-206ENST00000427785 CCDC89Q8N998 374 aa12.41□□□□□ -0.42
RFC4-206ENST00000427785 RIN3Q8TB24 985 aa12.41□□□□□ -0.42
RFC4-206ENST00000427785 SH3RF2Q8TEC5 729 aa12.41□□□□□ -0.42
RFC4-206ENST00000427785 RSAD2Q8WXG1 361 aa12.41□□□□□ -0.42
RFC4-206ENST00000427785 RUBCNQ92622 972 aa12.41□□□□□ -0.42
RFC4-206ENST00000427785 LGMNQ99538 433 aa12.41□□□□□ -0.42
RFC4-206ENST00000427785 ZYG11BQ9C0D3 744 aa12.41□□□□□ -0.42
RFC4-206ENST00000427785 KLC2Q9H0B6 622 aa12.41□□□□□ -0.42
RFC4-206ENST00000427785 PCDH9Q9HC56 1237 aa12.41□□□□□ -0.42
RFC4-206ENST00000427785 GDF3Q9NR23 364 aa12.41□□□□□ -0.42
RFC4-206ENST00000427785 LSM7Q9UK45 103 aaKnown RBP12.41□□□□□ -0.42
RFC4-206ENST00000427785 ARHGAP26Q9UNA1 814 aa12.41□□□□□ -0.42
RFC4-206ENST00000427785 SNX24Q9Y343 169 aa12.41□□□□□ -0.42
RFC4-206ENST00000427785 NEU2Q9Y3R4 380 aa12.41□□□□□ -0.42
RFC4-206ENST00000427785 SOX1O00570 391 aaPredicted RBP12.4□□□□□ -0.42
RFC4-206ENST00000427785 DYNC1I1O14576 645 aa12.4□□□□□ -0.42
RFC4-206ENST00000427785 ZNF197O14709 1029 aa12.4□□□□□ -0.42
RFC4-206ENST00000427785 PPP1R12AO14974 1030 aaPredicted RBP12.4□□□□□ -0.42
RFC4-206ENST00000427785 TBX10O75333 385 aa12.4□□□□□ -0.42
RFC4-206ENST00000427785 LATS1O95835 1130 aa12.4□□□□□ -0.42
RFC4-206ENST00000427785 TNFRSF8P28908 595 aa12.4□□□□□ -0.42
RFC4-206ENST00000427785 CARSP49589 748 aaKnown RBP12.4□□□□□ -0.42
RFC4-206ENST00000427785 NUMBP49757 651 aa12.4□□□□□ -0.42
RFC4-206ENST00000427785 LMNB2Q03252 620 aa12.4□□□□□ -0.42
RFC4-206ENST00000427785 GALNT2Q10471 571 aa12.4□□□□□ -0.42
RFC4-206ENST00000427785 AP1B1Q10567 949 aa12.4□□□□□ -0.42
RFC4-206ENST00000427785 MTA1Q13330 715 aa12.4□□□□□ -0.42
RFC4-206ENST00000427785 XRCC4Q13426 336 aa12.4□□□□□ -0.42
RFC4-206ENST00000427785 HLTFQ14527 1009 aaKnown RBP eCLIP12.4□□□□□ -0.42
RFC4-206ENST00000427785 GRIN2CQ14957 1233 aa12.4□□□□□ -0.42
RFC4-206ENST00000427785 PDK1Q15118 436 aa12.4□□□□□ -0.42
RFC4-206ENST00000427785 RABGAP1LQ5R372 815 aa12.4□□□□□ -0.42
RFC4-206ENST00000427785 DUPD1Q68J44 220 aa12.4□□□□□ -0.42
RFC4-206ENST00000427785 WDR93Q6P2C0 686 aa12.4□□□□□ -0.42
RFC4-206ENST00000427785 SYCE2Q6PIF2 218 aa12.4□□□□□ -0.42
RFC4-206ENST00000427785 ARHGAP36Q6ZRI8 547 aa12.4□□□□□ -0.42
RFC4-206ENST00000427785 EP400NLQ6ZTU2 488 aa12.4□□□□□ -0.42
RFC4-206ENST00000427785 SYDE1Q6ZW31 735 aaPredicted RBP12.4□□□□□ -0.42
RFC4-206ENST00000427785 BBS7Q8IWZ6 715 aa12.4□□□□□ -0.42
RFC4-206ENST00000427785 IFT20Q8IY31 132 aa12.4□□□□□ -0.42
RFC4-206ENST00000427785 MICALL1Q8N3F8 863 aa12.4□□□□□ -0.42
RFC4-206ENST00000427785 TFB1MQ8WVM0 346 aaKnown RBP12.4□□□□□ -0.42
RFC4-206ENST00000427785 IFT81Q8WYA0 676 aa12.4□□□□□ -0.42
RFC4-206ENST00000427785 USP13Q92995 863 aaPredicted RBP12.4□□□□□ -0.42
RFC4-206ENST00000427785 ZSWIM3Q96MP5 696 aa12.4□□□□□ -0.42
RFC4-206ENST00000427785 ERP44Q9BS26 406 aa12.4□□□□□ -0.42
RFC4-206ENST00000427785 NEUROG2Q9H2A3 272 aa12.4□□□□□ -0.42
RFC4-206ENST00000427785 TMEM248Q9NWD8 314 aa12.4□□□□□ -0.42
RFC4-206ENST00000427785 SEPT10Q9P0V9 454 aa12.4□□□□□ -0.42
RFC4-206ENST00000427785 PPARGC1AQ9UBK2 798 aaKnown RBP12.4□□□□□ -0.42
RFC4-206ENST00000427785 RAB21Q9UL25 225 aa12.4□□□□□ -0.42
RFC4-206ENST00000427785 DRG1Q9Y295 367 aaKnown RBP12.4□□□□□ -0.42
RFC4-206ENST00000427785 ZFP37Q9Y6Q3 630 aaPredicted RBP12.4□□□□□ -0.42
RFC4-206ENST00000427785 A0A1W2PPC1 479 aa12.39□□□□□ -0.43
RFC4-206ENST00000427785 BCLAF3A2AJT9 711 aaKnown RBP12.39□□□□□ -0.43
RFC4-206ENST00000427785 CFAP69A5D8W1 941 aa12.39□□□□□ -0.43
RFC4-206ENST00000427785 DRGXA6NNA5 263 aa12.39□□□□□ -0.43
RFC4-206ENST00000427785 WASH4PA8MWX3 477 aa12.39□□□□□ -0.43
RFC4-206ENST00000427785 HACD1B0YJ81 288 aa12.39□□□□□ -0.43
RFC4-206ENST00000427785 PAPLNO95428 1278 aa12.39□□□□□ -0.43
RFC4-206ENST00000427785 FSHRP23945 695 aa12.39□□□□□ -0.43
RFC4-206ENST00000427785 ADGRE1Q14246 886 aa12.39□□□□□ -0.43
RFC4-206ENST00000427785 CBX2Q14781 532 aaPredicted RBP12.39□□□□□ -0.43
RFC4-206ENST00000427785 ZNF77Q15935 545 aa12.39□□□□□ -0.43
RFC4-206ENST00000427785 ADGRF1Q5T601 910 aa12.39□□□□□ -0.43
RFC4-206ENST00000427785 HEATR6Q6AI08 1181 aaKnown RBP12.39□□□□□ -0.43
RFC4-206ENST00000427785 GPR149Q86SP6 731 aa12.39□□□□□ -0.43
RFC4-206ENST00000427785 NPAS3Q8IXF0 933 aa12.39□□□□□ -0.43
RFC4-206ENST00000427785 ATPAF2Q8N5M1 289 aa12.39□□□□□ -0.43
RFC4-206ENST00000427785 CCNYQ8ND76 341 aa12.39□□□□□ -0.43
RFC4-206ENST00000427785 ANKRD7Q92527 254 aa12.39□□□□□ -0.43
RFC4-206ENST00000427785 AZIN2Q96A70 460 aa12.39□□□□□ -0.43
RFC4-206ENST00000427785 HMCESQ96FZ2 354 aa12.39□□□□□ -0.43
RFC4-206ENST00000427785 FAM161BQ96MY7 647 aa12.39□□□□□ -0.43
RFC4-206ENST00000427785 DDX50Q9BQ39 737 aaKnown RBP12.39□□□□□ -0.43
RFC4-206ENST00000427785 CEP41Q9BYV8 373 aa12.39□□□□□ -0.43
RFC4-206ENST00000427785 SLC39A8Q9C0K1 460 aa12.39□□□□□ -0.43
RFC4-206ENST00000427785 NOL6Q9H6R4 1146 aaKnown RBP12.39□□□□□ -0.43
RFC4-206ENST00000427785 GRHL1Q9NZI5 618 aa12.39□□□□□ -0.43
RFC4-206ENST00000427785 ZNF212Q9UDV6 495 aa12.39□□□□□ -0.43
RFC4-206ENST00000427785 NFU1Q9UMS0 254 aa12.39□□□□□ -0.43
RFC4-206ENST00000427785 RAD54BQ9Y620 910 aa12.39□□□□□ -0.43
RFC4-206ENST00000427785 CDH23Q9H251 3354 aa12.38□□□□□ -0.43
RFC4-206ENST00000427785 TMEM265A0A087WTH1 108 aa12.38□□□□□ -0.43
RFC4-206ENST00000427785 F5H423 210 aaPredicted RBP12.38□□□□□ -0.43
RFC4-206ENST00000427785 RNF103O00237 685 aa12.38□□□□□ -0.43
RFC4-206ENST00000427785 TBL1XO60907 577 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms