RNA–Protein interactions for RNA: ENST00000427755.2

DEPDC7-203, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,212 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-203ENST00000427755 PCDHGA12O60330 932 aa13.5□□□□□ -0.25
DEPDC7-203ENST00000427755 TRUB2O95900 331 aaKnown RBP13.5□□□□□ -0.25
DEPDC7-203ENST00000427755 APOEP02649 317 aa13.5□□□□□ -0.25
DEPDC7-203ENST00000427755 SRPRAP08240 638 aaKnown RBP13.5□□□□□ -0.25
DEPDC7-203ENST00000427755 ATXN1LP0C7T5 689 aaKnown RBP13.5□□□□□ -0.25
DEPDC7-203ENST00000427755 TACR2P21452 398 aa13.5□□□□□ -0.25
DEPDC7-203ENST00000427755 GNA15P30679 374 aa13.5□□□□□ -0.25
DEPDC7-203ENST00000427755 CTSKP43235 329 aa13.5□□□□□ -0.25
DEPDC7-203ENST00000427755 GALCP54803 685 aa13.5□□□□□ -0.25
DEPDC7-203ENST00000427755 YWHAZP63104 245 aaKnown RBP13.5□□□□□ -0.25
DEPDC7-203ENST00000427755 APBA1Q02410 837 aa13.5□□□□□ -0.25
DEPDC7-203ENST00000427755 PDCLQ13371 301 aa13.5□□□□□ -0.25
DEPDC7-203ENST00000427755 CST6Q15828 149 aa13.5□□□□□ -0.25
DEPDC7-203ENST00000427755 NCEH1Q6PIU2 408 aa13.5□□□□□ -0.25
DEPDC7-203ENST00000427755 ENOSF1Q7L5Y1 443 aa13.5□□□□□ -0.25
DEPDC7-203ENST00000427755 CHSY1Q86X52 802 aa13.5□□□□□ -0.25
DEPDC7-203ENST00000427755 PROSER1Q86XN7 944 aa13.5□□□□□ -0.25
DEPDC7-203ENST00000427755 MMAAQ8IVH4 418 aaKnown RBP13.5□□□□□ -0.25
DEPDC7-203ENST00000427755 WDTC1Q8N5D0 677 aa13.5□□□□□ -0.25
DEPDC7-203ENST00000427755 RHBDD1Q8TEB9 315 aa13.5□□□□□ -0.25
DEPDC7-203ENST00000427755 IGSF8Q969P0 613 aa13.5□□□□□ -0.25
DEPDC7-203ENST00000427755 BTN2A3PQ96KV6 586 aa13.5□□□□□ -0.25
DEPDC7-203ENST00000427755 MED15Q96RN5 788 aa13.5□□□□□ -0.25
DEPDC7-203ENST00000427755 CDC6Q99741 560 aa13.5□□□□□ -0.25
DEPDC7-203ENST00000427755 CRACR2AQ9BSW2 395 aa13.5□□□□□ -0.25
DEPDC7-203ENST00000427755 TRIM62Q9BVG3 475 aa13.5□□□□□ -0.25
DEPDC7-203ENST00000427755 THAP9Q9H5L6 903 aa13.5□□□□□ -0.25
DEPDC7-203ENST00000427755 EBF2Q9HAK2 575 aa13.5□□□□□ -0.25
DEPDC7-203ENST00000427755 ADAMTS1Q9UHI8 967 aa13.5□□□□□ -0.25
DEPDC7-203ENST00000427755 WDFY3Q8IZQ1 3526 aa13.5□□□□□ -0.25
DEPDC7-203ENST00000427755 AKAP13Q12802 2813 aa13.49□□□□□ -0.25
DEPDC7-203ENST00000427755 EDDM13A0A1B0GTR0 161 aa13.49□□□□□ -0.25
DEPDC7-203ENST00000427755 A0A1W2PPC4 97 aa13.49□□□□□ -0.25
DEPDC7-203ENST00000427755 KCNU1A8MYU2 1149 aa13.49□□□□□ -0.25
DEPDC7-203ENST00000427755 H0Y8X5 98 aa13.49□□□□□ -0.25
DEPDC7-203ENST00000427755 THAP12O43422 761 aa13.49□□□□□ -0.25
DEPDC7-203ENST00000427755 RACK1P63244 317 aaKnown RBP13.49□□□□□ -0.25
DEPDC7-203ENST00000427755 ECT2LQ008S8 904 aa13.49□□□□□ -0.25
DEPDC7-203ENST00000427755 SUZ12Q15022 739 aaKnown RBP13.49□□□□□ -0.25
DEPDC7-203ENST00000427755 TRIM65Q6PJ69 517 aa13.49□□□□□ -0.25
DEPDC7-203ENST00000427755 TMPRSS7Q7RTY8 843 aa13.49□□□□□ -0.25
DEPDC7-203ENST00000427755 AADATQ8N5Z0 425 aa13.49□□□□□ -0.25
DEPDC7-203ENST00000427755 GANCQ8TET4 914 aa13.49□□□□□ -0.25
DEPDC7-203ENST00000427755 PTPRN2Q92932 1015 aa13.49□□□□□ -0.25
DEPDC7-203ENST00000427755 SLC6A18Q96N87 628 aa13.49□□□□□ -0.25
DEPDC7-203ENST00000427755 SLC2A13Q96QE2 648 aa13.49□□□□□ -0.25
DEPDC7-203ENST00000427755 CPXM1Q96SM3 734 aa13.49□□□□□ -0.25
DEPDC7-203ENST00000427755 NCKAP1Q9Y2A7 1128 aa13.49□□□□□ -0.25
DEPDC7-203ENST00000427755 ZZEF1O43149 2961 aa13.49□□□□□ -0.25
DEPDC7-203ENST00000427755 NUMA1Q14980 2115 aa13.48□□□□□ -0.25
DEPDC7-203ENST00000427755 FAM47DPA6NHR8 397 aa13.48□□□□□ -0.25
DEPDC7-203ENST00000427755 VILLO15195 856 aa13.48□□□□□ -0.25
DEPDC7-203ENST00000427755 RNASEH1O60930 286 aaKnown RBP13.48□□□□□ -0.25
DEPDC7-203ENST00000427755 MOCS3O95396 460 aa13.48□□□□□ -0.25
DEPDC7-203ENST00000427755 WNT1P04628 370 aa13.48□□□□□ -0.25
DEPDC7-203ENST00000427755 SLC9A1P19634 815 aa13.48□□□□□ -0.25
DEPDC7-203ENST00000427755 SLC8A1P32418 973 aa13.48□□□□□ -0.25
DEPDC7-203ENST00000427755 STK19P49842 368 aaPredicted RBP13.48□□□□□ -0.25
DEPDC7-203ENST00000427755 CCT8P50990 548 aa13.48□□□□□ -0.25
DEPDC7-203ENST00000427755 KCNJ12Q14500 433 aa13.48□□□□□ -0.25
DEPDC7-203ENST00000427755 CIR1Q86X95 450 aaPredicted RBP13.48□□□□□ -0.25
DEPDC7-203ENST00000427755 IRF2BP1Q8IU81 584 aa13.48□□□□□ -0.25
DEPDC7-203ENST00000427755 CCDC117Q8IWD4 279 aaPredicted RBP13.48□□□□□ -0.25
DEPDC7-203ENST00000427755 STK40Q8N2I9 435 aa13.48□□□□□ -0.25
DEPDC7-203ENST00000427755 OR2T34Q8NGX1 318 aa13.48□□□□□ -0.25
DEPDC7-203ENST00000427755 FRS2Q8WU20 508 aa13.48□□□□□ -0.25
DEPDC7-203ENST00000427755 SHC3Q92529 594 aa13.48□□□□□ -0.25
DEPDC7-203ENST00000427755 RPL10LQ96L21 214 aaKnown RBP13.48□□□□□ -0.25
DEPDC7-203ENST00000427755 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.48□□□□□ -0.25
DEPDC7-203ENST00000427755 RWDD2AQ9UIY3 292 aa13.48□□□□□ -0.25
DEPDC7-203ENST00000427755 FZD4Q9ULV1 537 aa13.48□□□□□ -0.25
DEPDC7-203ENST00000427755 PKD1L2Q7Z442 2459 aa13.47□□□□□ -0.25
DEPDC7-203ENST00000427755 FAM208BQ5VWN6 2430 aa13.47□□□□□ -0.25
DEPDC7-203ENST00000427755 A0A1W2PR77 199 aa13.47□□□□□ -0.25
DEPDC7-203ENST00000427755 F5H5T6 163 aa13.47□□□□□ -0.25
DEPDC7-203ENST00000427755 WNT9AO14904 365 aa13.47□□□□□ -0.25
DEPDC7-203ENST00000427755 TNFSF14O43557 240 aa13.47□□□□□ -0.25
DEPDC7-203ENST00000427755 RNASEH2AO75792 299 aaKnown RBP13.47□□□□□ -0.25
DEPDC7-203ENST00000427755 FGFR1OPO95684 399 aaKnown RBP13.47□□□□□ -0.25
DEPDC7-203ENST00000427755 GLI1P08151 1106 aa13.47□□□□□ -0.25
DEPDC7-203ENST00000427755 VAV1P15498 845 aa13.47□□□□□ -0.25
DEPDC7-203ENST00000427755 PDGFRAP16234 1089 aa13.47□□□□□ -0.25
DEPDC7-203ENST00000427755 MZF1P28698 734 aaPredicted RBP13.47□□□□□ -0.25
DEPDC7-203ENST00000427755 GRK6P43250 576 aa13.47□□□□□ -0.25
DEPDC7-203ENST00000427755 NUMBP49757 651 aa13.47□□□□□ -0.25
DEPDC7-203ENST00000427755 PLK1P53350 603 aa13.47□□□□□ -0.25
DEPDC7-203ENST00000427755 ADPRHP54922 357 aa13.47□□□□□ -0.25
DEPDC7-203ENST00000427755 SFSWAPQ12872 951 aaKnown RBP13.47□□□□□ -0.25
DEPDC7-203ENST00000427755 SLC12A1Q13621 1099 aa13.47□□□□□ -0.25
DEPDC7-203ENST00000427755 ELAVL3Q14576 367 aaKnown RBP13.47□□□□□ -0.25
DEPDC7-203ENST00000427755 CXorf57Q6NSI4 855 aaKnown RBP13.47□□□□□ -0.25
DEPDC7-203ENST00000427755 FBXL22Q6P050 247 aa13.47□□□□□ -0.25
DEPDC7-203ENST00000427755 MARCH9Q86YJ5 346 aa13.47□□□□□ -0.25
DEPDC7-203ENST00000427755 DEFB106AQ8N104 65 aa13.47□□□□□ -0.25
DEPDC7-203ENST00000427755 CCAR2Q8N163 923 aaKnown RBP13.47□□□□□ -0.25
DEPDC7-203ENST00000427755 ATP6V0D2Q8N8Y2 350 aa13.47□□□□□ -0.25
DEPDC7-203ENST00000427755 OR52K2Q8NGK3 314 aa13.47□□□□□ -0.25
DEPDC7-203ENST00000427755 FAM131CQ96AQ9 280 aa13.47□□□□□ -0.25
DEPDC7-203ENST00000427755 ALG14Q96F25 216 aa13.47□□□□□ -0.25
DEPDC7-203ENST00000427755 FAM81BQ96LP2 452 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms