RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 LONRF1Q17RB8 773 aa5.55□□□□□ -1.52
LINC00458-202ENST00000427299 Q4G0T1 1027 aa5.55□□□□□ -1.52
LINC00458-202ENST00000427299 PXDC1Q5TGL8 231 aa5.55□□□□□ -1.52
LINC00458-202ENST00000427299 FAM160B1Q5W0V3 765 aa5.55□□□□□ -1.52
LINC00458-202ENST00000427299 ZNF790Q6PG37 636 aa5.55□□□□□ -1.52
LINC00458-202ENST00000427299 TRIM72Q6ZMU5 477 aa5.55□□□□□ -1.52
LINC00458-202ENST00000427299 SRLQ86TD4 932 aa5.55□□□□□ -1.52
LINC00458-202ENST00000427299 DPP9Q86TI2 863 aa5.55□□□□□ -1.52
LINC00458-202ENST00000427299 CNGA4Q8IV77 575 aa5.55□□□□□ -1.52
LINC00458-202ENST00000427299 FAM186BQ8IYM0 893 aa5.55□□□□□ -1.52
LINC00458-202ENST00000427299 FBXL16Q8N461 479 aa5.55□□□□□ -1.52
LINC00458-202ENST00000427299 RNF152Q8N8N0 203 aa5.55□□□□□ -1.52
LINC00458-202ENST00000427299 ENAHQ8N8S7 591 aaPredicted RBP5.55□□□□□ -1.52
LINC00458-202ENST00000427299 ANKRD7Q92527 254 aa5.55□□□□□ -1.52
LINC00458-202ENST00000427299 MRPS27Q92552 414 aaKnown RBP5.55□□□□□ -1.52
LINC00458-202ENST00000427299 FAM227BQ96M60 508 aa5.55□□□□□ -1.52
LINC00458-202ENST00000427299 P2RX7Q99572 595 aaKnown RBP5.55□□□□□ -1.52
LINC00458-202ENST00000427299 BPIFA3Q9BQP9 254 aa5.55□□□□□ -1.52
LINC00458-202ENST00000427299 UNKQ9C0B0 810 aaKnown RBP5.55□□□□□ -1.52
LINC00458-202ENST00000427299 BOLA2Q9H3K6 86 aa5.55□□□□□ -1.52
LINC00458-202ENST00000427299 MTMR4Q9NYA4 1195 aa5.55□□□□□ -1.52
LINC00458-202ENST00000427299 COL20A1Q9P218 1284 aa5.55□□□□□ -1.52
LINC00458-202ENST00000427299 CPNE7Q9UBL6 633 aa5.55□□□□□ -1.52
LINC00458-202ENST00000427299 CTNNA3Q9UI47 895 aa5.55□□□□□ -1.52
LINC00458-202ENST00000427299 PA2G4Q9UQ80 394 aaKnown RBP5.55□□□□□ -1.52
LINC00458-202ENST00000427299 SSX2IPQ9Y2D8 614 aa5.55□□□□□ -1.52
LINC00458-202ENST00000427299 AFG3L2Q9Y4W6 797 aa5.55□□□□□ -1.52
LINC00458-202ENST00000427299 TNS2Q63HR2 1409 aa5.55□□□□□ -1.52
LINC00458-202ENST00000427299 MYH8P13535 1937 aa5.54□□□□□ -1.52
LINC00458-202ENST00000427299 WDR17Q8IZU2 1322 aa5.54□□□□□ -1.52
LINC00458-202ENST00000427299 SALL1Q9NSC2 1324 aa5.54□□□□□ -1.52
LINC00458-202ENST00000427299 SCN7AQ01118 1682 aa5.54□□□□□ -1.52
LINC00458-202ENST00000427299 RHPN2P1A8MT19 583 aa5.54□□□□□ -1.52
LINC00458-202ENST00000427299 F8W8V4 182 aa5.54□□□□□ -1.52
LINC00458-202ENST00000427299 H7C1Q1 480 aa5.54□□□□□ -1.52
LINC00458-202ENST00000427299 DCLK1O15075 740 aa5.54□□□□□ -1.52
LINC00458-202ENST00000427299 CIAO1O76071 339 aa5.54□□□□□ -1.52
LINC00458-202ENST00000427299 FESP07332 822 aa5.54□□□□□ -1.52
LINC00458-202ENST00000427299 NPSP0C0P6 89 aa5.54□□□□□ -1.52
LINC00458-202ENST00000427299 PIM1P11309 404 aaPredicted RBP5.54□□□□□ -1.52
LINC00458-202ENST00000427299 CPA1P15085 419 aa5.54□□□□□ -1.52
LINC00458-202ENST00000427299 TKTP29401 623 aaKnown RBP5.54□□□□□ -1.52
LINC00458-202ENST00000427299 IL15P40933 162 aaPredicted RBP5.54□□□□□ -1.52
LINC00458-202ENST00000427299 TRAPPC10P48553 1259 aa5.54□□□□□ -1.52
LINC00458-202ENST00000427299 HTRA4P83105 476 aaPredicted RBP5.54□□□□□ -1.52
LINC00458-202ENST00000427299 GABPB1Q06547 395 aaPredicted RBP5.54□□□□□ -1.52
LINC00458-202ENST00000427299 DMTNQ08495 405 aa5.54□□□□□ -1.52
LINC00458-202ENST00000427299 ZSCAN25Q6NSZ9 544 aa5.54□□□□□ -1.52
LINC00458-202ENST00000427299 CPLX2Q6PUV4 134 aaKnown RBP5.54□□□□□ -1.52
LINC00458-202ENST00000427299 ZNF589Q86UQ0 364 aaPredicted RBP5.54□□□□□ -1.52
LINC00458-202ENST00000427299 LUZP1Q86V48 1076 aa5.54□□□□□ -1.52
LINC00458-202ENST00000427299 LRRC71Q8N4P6 559 aa5.54□□□□□ -1.52
LINC00458-202ENST00000427299 NECAB1Q8N987 351 aa5.54□□□□□ -1.52
LINC00458-202ENST00000427299 SPC24Q8NBT2 197 aa5.54□□□□□ -1.52
LINC00458-202ENST00000427299 RP9Q8TA86 221 aaKnown RBP5.54□□□□□ -1.52
LINC00458-202ENST00000427299 ZNF274Q96GC6 653 aaPredicted RBP5.54□□□□□ -1.52
LINC00458-202ENST00000427299 CCDC34Q96HJ3 373 aa5.54□□□□□ -1.52
LINC00458-202ENST00000427299 TNIP3Q96KP6 325 aa5.54□□□□□ -1.52
LINC00458-202ENST00000427299 AGXT2Q9BYV1 514 aa5.54□□□□□ -1.52
LINC00458-202ENST00000427299 SIL1Q9H173 461 aa5.54□□□□□ -1.52
LINC00458-202ENST00000427299 PLCB1Q9NQ66 1216 aa5.54□□□□□ -1.52
LINC00458-202ENST00000427299 CNNM1Q9NRU3 951 aa5.54□□□□□ -1.52
LINC00458-202ENST00000427299 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.54□□□□□ -1.52
LINC00458-202ENST00000427299 PAG1Q9NWQ8 432 aa5.54□□□□□ -1.52
LINC00458-202ENST00000427299 HESX1Q9UBX0 185 aa5.54□□□□□ -1.52
LINC00458-202ENST00000427299 DBNLQ9UJU6 430 aaKnown RBP5.54□□□□□ -1.52
LINC00458-202ENST00000427299 SERTAD3Q9UJW9 196 aa5.54□□□□□ -1.52
LINC00458-202ENST00000427299 DOT1LQ8TEK3 1739 aa5.54□□□□□ -1.52
LINC00458-202ENST00000427299 ZMYM6O95789 1325 aa5.53□□□□□ -1.52
LINC00458-202ENST00000427299 TRIM43BA6NCK2 446 aa5.53□□□□□ -1.52
LINC00458-202ENST00000427299 GOLGA6L9A6NEM1 432 aa5.53□□□□□ -1.52
LINC00458-202ENST00000427299 H3BNC9 293 aa5.53□□□□□ -1.52
LINC00458-202ENST00000427299 TJP3O95049 919 aa5.53□□□□□ -1.52
LINC00458-202ENST00000427299 IGKV5-2P06315 115 aa5.53□□□□□ -1.52
LINC00458-202ENST00000427299 THP07101 528 aa5.53□□□□□ -1.52
LINC00458-202ENST00000427299 SNHG28P0DPA3 235 aa5.53□□□□□ -1.52
LINC00458-202ENST00000427299 TNNT1P13805 278 aa5.53□□□□□ -1.52
LINC00458-202ENST00000427299 TSHRP16473 764 aa5.53□□□□□ -1.52
LINC00458-202ENST00000427299 PPIFP30405 207 aaKnown RBP5.53□□□□□ -1.52
LINC00458-202ENST00000427299 RBM6P78332 1123 aaKnown RBP5.53□□□□□ -1.52
LINC00458-202ENST00000427299 STK3Q13188 491 aa5.53□□□□□ -1.52
LINC00458-202ENST00000427299 TPD52L1Q16890 204 aaPredicted RBP5.53□□□□□ -1.52
LINC00458-202ENST00000427299 IMMTQ16891 758 aaKnown RBP5.53□□□□□ -1.52
LINC00458-202ENST00000427299 FCRL6Q6DN72 434 aa5.53□□□□□ -1.52
LINC00458-202ENST00000427299 XRRA1Q6P2D8 792 aa5.53□□□□□ -1.52
LINC00458-202ENST00000427299 KIRREL2Q6UWL6 708 aa5.53□□□□□ -1.52
LINC00458-202ENST00000427299 PARS2Q7L3T8 475 aaKnown RBP5.53□□□□□ -1.52
LINC00458-202ENST00000427299 MICU3Q86XE3 530 aa5.53□□□□□ -1.52
LINC00458-202ENST00000427299 ZDHHC17Q8IUH5 632 aa5.53□□□□□ -1.52
LINC00458-202ENST00000427299 OR2C3Q8N628 320 aa5.53□□□□□ -1.52
LINC00458-202ENST00000427299 FAM46DQ8NEK8 389 aa5.53□□□□□ -1.52
LINC00458-202ENST00000427299 VPS37AQ8NEZ2 397 aa5.53□□□□□ -1.52
LINC00458-202ENST00000427299 ZNF397Q8NF99 534 aaPredicted RBP5.53□□□□□ -1.52
LINC00458-202ENST00000427299 DEPTORQ8TB45 409 aa5.53□□□□□ -1.52
LINC00458-202ENST00000427299 ATG4AQ8WYN0 398 aa5.53□□□□□ -1.52
LINC00458-202ENST00000427299 LRRC59Q96AG4 307 aaKnown RBP5.53□□□□□ -1.52
LINC00458-202ENST00000427299 TRIM43Q96BQ3 446 aaPredicted RBP5.53□□□□□ -1.52
LINC00458-202ENST00000427299 ERO1AQ96HE7 468 aa5.53□□□□□ -1.52
LINC00458-202ENST00000427299 CCDC138Q96M89 665 aa5.53□□□□□ -1.52
LINC00458-202ENST00000427299 C16orf45Q96MC5 204 aaPredicted RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms