RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 RALGAPA1Q6GYQ0 2036 aa13.15□□□□□ -0.3
GPC1-204ENST00000426280 TCRBV5S1A1TA0A578 114 aa13.15□□□□□ -0.3
GPC1-204ENST00000426280 LNP1A1A4G5 178 aa13.15□□□□□ -0.3
GPC1-204ENST00000426280 F5H5T6 163 aa13.15□□□□□ -0.3
GPC1-204ENST00000426280 H0Y626 953 aa13.15□□□□□ -0.3
GPC1-204ENST00000426280 LSM8O95777 96 aaKnown RBP13.15□□□□□ -0.3
GPC1-204ENST00000426280 PDGFRAP16234 1089 aa13.15□□□□□ -0.3
GPC1-204ENST00000426280 ABCB4P21439 1286 aa13.15□□□□□ -0.3
GPC1-204ENST00000426280 PBX1P40424 430 aa13.15□□□□□ -0.3
GPC1-204ENST00000426280 RPS14P62263 151 aaKnown RBP13.15□□□□□ -0.3
GPC1-204ENST00000426280 ZNF33AQ06730 810 aa13.15□□□□□ -0.3
GPC1-204ENST00000426280 CLEC16AQ2KHT3 1053 aa13.15□□□□□ -0.3
GPC1-204ENST00000426280 C15orf59Q2T9L4 293 aaPredicted RBP13.15□□□□□ -0.3
GPC1-204ENST00000426280 PLEKHG6Q3KR16 790 aa13.15□□□□□ -0.3
GPC1-204ENST00000426280 CCDC14Q49A88 953 aa13.15□□□□□ -0.3
GPC1-204ENST00000426280 C5orf22Q49AR2 442 aa13.15□□□□□ -0.3
GPC1-204ENST00000426280 AASDHQ4L235 1098 aaPredicted RBP13.15□□□□□ -0.3
GPC1-204ENST00000426280 STPG1Q5TH74 334 aa13.15□□□□□ -0.3
GPC1-204ENST00000426280 DGLUCYQ7Z3D6 616 aa13.15□□□□□ -0.3
GPC1-204ENST00000426280 CYP2U1Q7Z449 544 aa13.15□□□□□ -0.3
GPC1-204ENST00000426280 METTL3Q86U44 580 aaKnown RBP13.15□□□□□ -0.3
GPC1-204ENST00000426280 FAM124AQ86V42 546 aa13.15□□□□□ -0.3
GPC1-204ENST00000426280 ZNF677Q86XU0 584 aa13.15□□□□□ -0.3
GPC1-204ENST00000426280 ZDHHC17Q8IUH5 632 aa13.15□□□□□ -0.3
GPC1-204ENST00000426280 SIPA1Q96FS4 1042 aa13.15□□□□□ -0.3
GPC1-204ENST00000426280 TOE1Q96GM8 510 aaKnown RBP13.15□□□□□ -0.3
GPC1-204ENST00000426280 ZNF419Q96HQ0 510 aaPredicted RBP13.15□□□□□ -0.3
GPC1-204ENST00000426280 SPACA7Q96KW9 195 aa13.15□□□□□ -0.3
GPC1-204ENST00000426280 SPAG5Q96R06 1193 aa13.15□□□□□ -0.3
GPC1-204ENST00000426280 AGPAT1Q99943 283 aa13.15□□□□□ -0.3
GPC1-204ENST00000426280 TRIM62Q9BVG3 475 aa13.15□□□□□ -0.3
GPC1-204ENST00000426280 GPR174Q9BXC1 333 aa13.15□□□□□ -0.3
GPC1-204ENST00000426280 TAS2R14Q9NYV8 317 aa13.15□□□□□ -0.3
GPC1-204ENST00000426280 PLA2G4CQ9UP65 541 aa13.15□□□□□ -0.3
GPC1-204ENST00000426280 CEP83Q9Y592 693 aa13.15□□□□□ -0.3
GPC1-204ENST00000426280 OR51B4Q9Y5P0 310 aa13.15□□□□□ -0.3
GPC1-204ENST00000426280 PLXND1Q9Y4D7 1925 aa13.15□□□□□ -0.3
GPC1-204ENST00000426280 SPTBN4Q9H254 2564 aa13.14□□□□□ -0.31
GPC1-204ENST00000426280 A0A1W2PQC6 194 aa13.14□□□□□ -0.31
GPC1-204ENST00000426280 RNF103O00237 685 aa13.14□□□□□ -0.31
GPC1-204ENST00000426280 NPC1O15118 1278 aa13.14□□□□□ -0.31
GPC1-204ENST00000426280 SYNCRIPO60506 623 aaKnown RBP13.14□□□□□ -0.31
GPC1-204ENST00000426280 SIN3BO75182 1162 aa13.14□□□□□ -0.31
GPC1-204ENST00000426280 ENDOD1O94919 500 aa13.14□□□□□ -0.31
GPC1-204ENST00000426280 ACSL1P33121 698 aa13.14□□□□□ -0.31
GPC1-204ENST00000426280 SCNN1AP37088 669 aa13.14□□□□□ -0.31
GPC1-204ENST00000426280 METAP1P53582 386 aa13.14□□□□□ -0.31
GPC1-204ENST00000426280 ATP11AP98196 1134 aa13.14□□□□□ -0.31
GPC1-204ENST00000426280 DEUP1Q05D60 604 aa13.14□□□□□ -0.31
GPC1-204ENST00000426280 CDH18Q13634 790 aa13.14□□□□□ -0.31
GPC1-204ENST00000426280 STARD3Q14849 445 aa13.14□□□□□ -0.31
GPC1-204ENST00000426280 SLC25A52Q3SY17 297 aa13.14□□□□□ -0.31
GPC1-204ENST00000426280 C9orf64Q5T6V5 341 aa13.14□□□□□ -0.31
GPC1-204ENST00000426280 LYSMD4Q5XG99 296 aa13.14□□□□□ -0.31
GPC1-204ENST00000426280 C11orf74Q86VG3 221 aa13.14□□□□□ -0.31
GPC1-204ENST00000426280 C12orf50Q8NA57 414 aaPredicted RBP13.14□□□□□ -0.31
GPC1-204ENST00000426280 OR2I1PQ8NGU4 316 aa13.14□□□□□ -0.31
GPC1-204ENST00000426280 OR2T3Q8NH03 318 aa13.14□□□□□ -0.31
GPC1-204ENST00000426280 NETO1Q8TDF5 533 aa13.14□□□□□ -0.31
GPC1-204ENST00000426280 RXFP2Q8WXD0 754 aa13.14□□□□□ -0.31
GPC1-204ENST00000426280 PRCCQ92733 491 aaPredicted RBP13.14□□□□□ -0.31
GPC1-204ENST00000426280 PTPRN2Q92932 1015 aa13.14□□□□□ -0.31
GPC1-204ENST00000426280 PGAP3Q96FM1 320 aaPredicted RBP13.14□□□□□ -0.31
GPC1-204ENST00000426280 HSPA12BQ96MM6 686 aa13.14□□□□□ -0.31
GPC1-204ENST00000426280 RPRD1AQ96P16 312 aaPredicted RBP13.14□□□□□ -0.31
GPC1-204ENST00000426280 FAM129BQ96TA1 746 aa13.14□□□□□ -0.31
GPC1-204ENST00000426280 PSMB7Q99436 277 aa13.14□□□□□ -0.31
GPC1-204ENST00000426280 WDCPQ9H6R7 721 aa13.14□□□□□ -0.31
GPC1-204ENST00000426280 MPP6Q9NZW5 540 aa13.14□□□□□ -0.31
GPC1-204ENST00000426280 KIAA1522Q9P206 1035 aaPredicted RBP13.14□□□□□ -0.31
GPC1-204ENST00000426280 SERGEFQ9UGK8 458 aa13.14□□□□□ -0.31
GPC1-204ENST00000426280 CDV3Q9UKY7 258 aaKnown RBP13.14□□□□□ -0.31
GPC1-204ENST00000426280 SPAG17Q6Q759 2223 aa13.14□□□□□ -0.31
GPC1-204ENST00000426280 CKAP5Q14008 2032 aa13.13□□□□□ -0.31
GPC1-204ENST00000426280 DRGXA6NNA5 263 aa13.13□□□□□ -0.31
GPC1-204ENST00000426280 C4orf47A7E2U8 309 aa13.13□□□□□ -0.31
GPC1-204ENST00000426280 FAM72CH0Y354 149 aa13.13□□□□□ -0.31
GPC1-204ENST00000426280 ZNF217O75362 1048 aa13.13□□□□□ -0.31
GPC1-204ENST00000426280 ATP5BP06576 529 aaKnown RBP13.13□□□□□ -0.31
GPC1-204ENST00000426280 C7P10643 843 aa13.13□□□□□ -0.31
GPC1-204ENST00000426280 SLC2A3P11169 496 aa13.13□□□□□ -0.31
GPC1-204ENST00000426280 CD6P30203 668 aa13.13□□□□□ -0.31
GPC1-204ENST00000426280 RFC1P35251 1148 aaPredicted RBP13.13□□□□□ -0.31
GPC1-204ENST00000426280 PLK1P53350 603 aa13.13□□□□□ -0.31
GPC1-204ENST00000426280 BYSLQ13895 437 aaKnown RBP13.13□□□□□ -0.31
GPC1-204ENST00000426280 TRIM61Q5EBN2 209 aa13.13□□□□□ -0.31
GPC1-204ENST00000426280 FAM72AQ5TYM5 149 aa13.13□□□□□ -0.31
GPC1-204ENST00000426280 PEAR1Q5VY43 1037 aaPredicted RBP13.13□□□□□ -0.31
GPC1-204ENST00000426280 FAM72DQ6L9T8 149 aa13.13□□□□□ -0.31
GPC1-204ENST00000426280 WDR59Q6PJI9 974 aa13.13□□□□□ -0.31
GPC1-204ENST00000426280 FAM72BQ86X60 149 aa13.13□□□□□ -0.31
GPC1-204ENST00000426280 FAM131BQ86XD5 332 aa13.13□□□□□ -0.31
GPC1-204ENST00000426280 PHF13Q86YI8 300 aaPredicted RBP13.13□□□□□ -0.31
GPC1-204ENST00000426280 SYT12Q8IV01 421 aa13.13□□□□□ -0.31
GPC1-204ENST00000426280 FEM1AQ9BSK4 669 aa13.13□□□□□ -0.31
GPC1-204ENST00000426280 RTKNQ9BST9 563 aa13.13□□□□□ -0.31
GPC1-204ENST00000426280 ZNF212Q9UDV6 495 aa13.13□□□□□ -0.31
GPC1-204ENST00000426280 SLC12A6Q9UHW9 1150 aa13.13□□□□□ -0.31
GPC1-204ENST00000426280 DNAH14Q0VDD8 3507 aa13.13□□□□□ -0.31
GPC1-204ENST00000426280 NUP205Q92621 2012 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms