RNA–Protein interactions for RNA: ENST00000424643.3

SDCBPP2-201, Transcript of syndecan binding protein pseudogene 2, humanhuman

BASIC

Gene SDCBPP2, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP2-201ENST00000424643 DRG1Q9Y295 367 aaKnown RBP4.62□□□□□ -1.67
SDCBPP2-201ENST00000424643 PXDNLA1KZ92 1463 aa4.62□□□□□ -1.67
SDCBPP2-201ENST00000424643 TJP1Q07157 1748 aa4.61□□□□□ -1.67
SDCBPP2-201ENST00000424643 DOT1LQ8TEK3 1739 aa4.61□□□□□ -1.67
SDCBPP2-201ENST00000424643 MARCH11A6NNE9 402 aa4.61□□□□□ -1.67
SDCBPP2-201ENST00000424643 IPO8O15397 1037 aaKnown RBP4.61□□□□□ -1.67
SDCBPP2-201ENST00000424643 CBFA2T3O75081 653 aa4.61□□□□□ -1.67
SDCBPP2-201ENST00000424643 CDKL5O76039 1030 aa4.61□□□□□ -1.67
SDCBPP2-201ENST00000424643 NDUFA10O95299 355 aa4.61□□□□□ -1.67
SDCBPP2-201ENST00000424643 IGHDP01880 384 aa4.61□□□□□ -1.67
SDCBPP2-201ENST00000424643 IFIT1P09914 478 aaKnown RBP4.61□□□□□ -1.67
SDCBPP2-201ENST00000424643 GSTM5P46439 218 aa4.61□□□□□ -1.67
SDCBPP2-201ENST00000424643 RBM5P52756 815 aaKnown RBP eCLIP4.61□□□□□ -1.67
SDCBPP2-201ENST00000424643 CHRNDQ07001 517 aa4.61□□□□□ -1.67
SDCBPP2-201ENST00000424643 DPTQ07507 201 aa4.61□□□□□ -1.67
SDCBPP2-201ENST00000424643 PDCLQ13371 301 aa4.61□□□□□ -1.67
SDCBPP2-201ENST00000424643 SLC39A6Q13433 755 aa4.61□□□□□ -1.67
SDCBPP2-201ENST00000424643 CLCA4Q14CN2 919 aa4.61□□□□□ -1.67
SDCBPP2-201ENST00000424643 ACOX1Q15067 660 aa4.61□□□□□ -1.67
SDCBPP2-201ENST00000424643 MAP3K21Q5TCX8 1036 aa4.61□□□□□ -1.67
SDCBPP2-201ENST00000424643 CCDC30Q5VVM6 783 aa4.61□□□□□ -1.67
SDCBPP2-201ENST00000424643 PIK3AP1Q6ZUJ8 805 aa4.61□□□□□ -1.67
SDCBPP2-201ENST00000424643 ANKS1BQ7Z6G8 1248 aa4.61□□□□□ -1.67
SDCBPP2-201ENST00000424643 TICAM2Q86XR7 235 aa4.61□□□□□ -1.67
SDCBPP2-201ENST00000424643 NME8Q8N427 588 aa4.61□□□□□ -1.67
SDCBPP2-201ENST00000424643 PCYOX1LQ8NBM8 494 aa4.61□□□□□ -1.67
SDCBPP2-201ENST00000424643 SUPT20HQ8NEM7 779 aa4.61□□□□□ -1.67
SDCBPP2-201ENST00000424643 SLC22A17Q8WUG5 538 aa4.61□□□□□ -1.67
SDCBPP2-201ENST00000424643 PIGBQ92521 554 aa4.61□□□□□ -1.67
SDCBPP2-201ENST00000424643 HDAC2Q92769 488 aaKnown RBP4.61□□□□□ -1.67
SDCBPP2-201ENST00000424643 GLG1Q92896 1179 aa4.61□□□□□ -1.67
SDCBPP2-201ENST00000424643 HVCN1Q96D96 273 aa4.61□□□□□ -1.67
SDCBPP2-201ENST00000424643 EIF3CQ99613 913 aaKnown RBP4.61□□□□□ -1.67
SDCBPP2-201ENST00000424643 CCDC134Q9H6E4 229 aa4.61□□□□□ -1.67
SDCBPP2-201ENST00000424643 NOD2Q9HC29 1040 aa4.61□□□□□ -1.67
SDCBPP2-201ENST00000424643 RASSF1Q9NS23 344 aa4.61□□□□□ -1.67
SDCBPP2-201ENST00000424643 TMEM74BQ9NUR3 256 aa4.61□□□□□ -1.67
SDCBPP2-201ENST00000424643 TMEM160Q9NX00 188 aa4.61□□□□□ -1.67
SDCBPP2-201ENST00000424643 NFU1Q9UMS0 254 aa4.61□□□□□ -1.67
SDCBPP2-201ENST00000424643 DERAQ9Y315 318 aa4.61□□□□□ -1.67
SDCBPP2-201ENST00000424643 USP16Q9Y5T5 823 aa4.61□□□□□ -1.67
SDCBPP2-201ENST00000424643 SCINQ9Y6U3 715 aa4.61□□□□□ -1.67
SDCBPP2-201ENST00000424643 ADCY9O60503 1353 aa4.61□□□□□ -1.67
SDCBPP2-201ENST00000424643 ATP10DQ9P241 1426 aa4.61□□□□□ -1.67
SDCBPP2-201ENST00000424643 SBF2Q86WG5 1849 aa4.6□□□□□ -1.67
SDCBPP2-201ENST00000424643 GAGE12BA1L429 117 aa4.6□□□□□ -1.67
SDCBPP2-201ENST00000424643 GAGE12HA6NDE8 117 aa4.6□□□□□ -1.67
SDCBPP2-201ENST00000424643 STX16-NPEPL1H3BU86 382 aa4.6□□□□□ -1.67
SDCBPP2-201ENST00000424643 STX16O14662 325 aa4.6□□□□□ -1.67
SDCBPP2-201ENST00000424643 TCERG1O14776 1098 aaKnown RBP4.6□□□□□ -1.67
SDCBPP2-201ENST00000424643 LARGE1O95461 756 aa4.6□□□□□ -1.67
SDCBPP2-201ENST00000424643 LDHCP07864 332 aa4.6□□□□□ -1.67
SDCBPP2-201ENST00000424643 TMEM225BP0DP42 221 aa4.6□□□□□ -1.67
SDCBPP2-201ENST00000424643 CD19P15391 556 aa4.6□□□□□ -1.67
SDCBPP2-201ENST00000424643 RXRGP48443 463 aa4.6□□□□□ -1.67
SDCBPP2-201ENST00000424643 ATXN1P54253 815 aaKnown RBP4.6□□□□□ -1.67
SDCBPP2-201ENST00000424643 VAMP2P63027 116 aa4.6□□□□□ -1.67
SDCBPP2-201ENST00000424643 RNASELQ05823 741 aaKnown RBP4.6□□□□□ -1.67
SDCBPP2-201ENST00000424643 BFSP2Q13515 415 aa4.6□□□□□ -1.67
SDCBPP2-201ENST00000424643 PROSER3Q2NL68 480 aa4.6□□□□□ -1.67
SDCBPP2-201ENST00000424643 BEAN1Q3B7T3 259 aa4.6□□□□□ -1.67
SDCBPP2-201ENST00000424643 ZNF569Q5MCW4 686 aa4.6□□□□□ -1.67
SDCBPP2-201ENST00000424643 SYNE3Q6ZMZ3 975 aa4.6□□□□□ -1.67
SDCBPP2-201ENST00000424643 KRT27Q7Z3Y8 459 aa4.6□□□□□ -1.67
SDCBPP2-201ENST00000424643 TBC1D1Q86TI0 1168 aaPredicted RBP4.6□□□□□ -1.67
SDCBPP2-201ENST00000424643 CAND1Q86VP6 1230 aaKnown RBP4.6□□□□□ -1.67
SDCBPP2-201ENST00000424643 LDLRAD3Q86YD5 345 aa4.6□□□□□ -1.67
SDCBPP2-201ENST00000424643 ZNF276Q8N554 614 aa4.6□□□□□ -1.67
SDCBPP2-201ENST00000424643 AMER2Q8N7J2 671 aa4.6□□□□□ -1.67
SDCBPP2-201ENST00000424643 FRAT1Q92837 279 aaPredicted RBP4.6□□□□□ -1.67
SDCBPP2-201ENST00000424643 RRP36Q96EU6 259 aaKnown RBP4.6□□□□□ -1.67
SDCBPP2-201ENST00000424643 GPR63Q9BZJ6 419 aa4.6□□□□□ -1.67
SDCBPP2-201ENST00000424643 API5Q9BZZ5 524 aaKnown RBP4.6□□□□□ -1.67
SDCBPP2-201ENST00000424643 LIN7CQ9NUP9 197 aaKnown RBP4.6□□□□□ -1.67
SDCBPP2-201ENST00000424643 DBF4Q9UBU7 674 aaPredicted RBP4.6□□□□□ -1.67
SDCBPP2-201ENST00000424643 NKX1-2Q9UD57 310 aaPredicted RBP4.6□□□□□ -1.67
SDCBPP2-201ENST00000424643 DDX19BQ9UMR2 479 aa4.6□□□□□ -1.67
SDCBPP2-201ENST00000424643 ARHGAP26Q9UNA1 814 aa4.6□□□□□ -1.67
SDCBPP2-201ENST00000424643 DNAJC16Q9Y2G8 782 aa4.6□□□□□ -1.67
SDCBPP2-201ENST00000424643 PCDHB7Q9Y5E2 793 aa4.6□□□□□ -1.67
SDCBPP2-201ENST00000424643 UTYO14607 1347 aa4.6□□□□□ -1.67
SDCBPP2-201ENST00000424643 WDR33Q9C0J8 1336 aaKnown RBP4.6□□□□□ -1.67
SDCBPP2-201ENST00000424643 NHSQ6T4R5 1651 aa4.6□□□□□ -1.67
SDCBPP2-201ENST00000424643 NUP188Q5SRE5 1749 aa4.6□□□□□ -1.67
SDCBPP2-201ENST00000424643 KAT6BQ8WYB5 2073 aa4.6□□□□□ -1.67
SDCBPP2-201ENST00000424643 A0A087X1B8 175 aa4.59□□□□□ -1.67
SDCBPP2-201ENST00000424643 A1L4Q6 167 aa4.59□□□□□ -1.67
SDCBPP2-201ENST00000424643 UNC119BA6NIH7 251 aa4.59□□□□□ -1.67
SDCBPP2-201ENST00000424643 FAM90A20PA6NIJ5 464 aa4.59□□□□□ -1.67
SDCBPP2-201ENST00000424643 SLC38A8A6NNN8 435 aa4.59□□□□□ -1.67
SDCBPP2-201ENST00000424643 PRSS47A8MTI9 375 aa4.59□□□□□ -1.67
SDCBPP2-201ENST00000424643 B4E171 279 aa4.59□□□□□ -1.67
SDCBPP2-201ENST00000424643 PSMD9O00233 223 aa4.59□□□□□ -1.67
SDCBPP2-201ENST00000424643 CTIFO43310 598 aaKnown RBP4.59□□□□□ -1.67
SDCBPP2-201ENST00000424643 LY75O60449 1722 aa4.59□□□□□ -1.67
SDCBPP2-201ENST00000424643 TBX18O95935 607 aa4.59□□□□□ -1.67
SDCBPP2-201ENST00000424643 PEX11BO96011 259 aa4.59□□□□□ -1.67
SDCBPP2-201ENST00000424643 TFRCP02786 760 aaKnown RBP4.59□□□□□ -1.67
SDCBPP2-201ENST00000424643 FESP07332 822 aa4.59□□□□□ -1.67
SDCBPP2-201ENST00000424643 RHOP08100 348 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms