RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 USP7Q93009 1102 aa6.59□□□□□ -1.35
SDCBP-203ENST00000424270 NAT6Q93015 286 aa6.59□□□□□ -1.35
SDCBP-203ENST00000424270 RNF166Q96A37 237 aaPredicted RBP6.59□□□□□ -1.35
SDCBP-203ENST00000424270 ZNF274Q96GC6 653 aaPredicted RBP6.59□□□□□ -1.35
SDCBP-203ENST00000424270 FAM84AQ96KN4 292 aa6.59□□□□□ -1.35
SDCBP-203ENST00000424270 PLIN2Q99541 437 aa6.59□□□□□ -1.35
SDCBP-203ENST00000424270 REPIN1Q9BWE0 567 aaKnown RBP6.59□□□□□ -1.35
SDCBP-203ENST00000424270 B3GNT5Q9BYG0 378 aa6.59□□□□□ -1.35
SDCBP-203ENST00000424270 MTMR12Q9C0I1 747 aa6.59□□□□□ -1.35
SDCBP-203ENST00000424270 DPEP3Q9H4B8 488 aa6.59□□□□□ -1.35
SDCBP-203ENST00000424270 KRT82Q9NSB4 513 aa6.59□□□□□ -1.35
SDCBP-203ENST00000424270 AKAP7Q9P0M2 348 aaPredicted RBP6.59□□□□□ -1.35
SDCBP-203ENST00000424270 CLEC4EQ9ULY5 219 aa6.59□□□□□ -1.35
SDCBP-203ENST00000424270 TP53TG5Q9Y2B4 290 aa6.59□□□□□ -1.35
SDCBP-203ENST00000424270 SCN1AP35498 2009 aa6.59□□□□□ -1.36
SDCBP-203ENST00000424270 LY6G6EA0A0G2JKS1 128 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 TISP43B9A030 160 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 STMND1H3BQB6 276 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 LZTS3O60299 673 aaPredicted RBP6.58□□□□□ -1.36
SDCBP-203ENST00000424270 STC2O76061 302 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 KIF20AO95235 890 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 PIGRP01833 764 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 RALAP11233 206 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 PABPC1P11940 636 aaKnown RBP6.58□□□□□ -1.36
SDCBP-203ENST00000424270 PRLRP16471 622 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 NR1D1P20393 614 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 C5AR1P21730 350 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 CD82P27701 267 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 AKT2P31751 481 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 ABCD1P33897 745 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 COG7P83436 770 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 EFEMP1Q12805 493 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 POSTNQ15063 836 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 DEFB109BQ30KR1 87 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 ESRP1Q6NXG1 681 aaKnown RBP6.58□□□□□ -1.36
SDCBP-203ENST00000424270 SLC39A4Q6P5W5 647 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 Q6ZNB5 142 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 ASB18Q6ZVZ8 466 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 TIPARPQ7Z3E1 657 aaKnown RBP6.58□□□□□ -1.36
SDCBP-203ENST00000424270 B3GNT8Q7Z7M8 397 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 FAM35AQ86V20 835 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 B3GALNT2Q8NCR0 500 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 ZNF548Q8NEK5 533 aaPredicted RBP6.58□□□□□ -1.36
SDCBP-203ENST00000424270 APOBEC4Q8WW27 367 aaKnown RBP6.58□□□□□ -1.36
SDCBP-203ENST00000424270 NANOS1Q8WY41 292 aaKnown RBP6.58□□□□□ -1.36
SDCBP-203ENST00000424270 KLK6Q92876 244 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 KIAA1143Q96AT1 154 aaPredicted RBP6.58□□□□□ -1.36
SDCBP-203ENST00000424270 SAAL1Q96ER3 474 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 P2RY11Q96G91 374 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 SMARCD1Q96GM5 515 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 C5orf34Q96MH7 638 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 TMEM74Q96NL1 305 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 CGRRF1Q99675 332 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 CMKLR1Q99788 373 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 MRPL45Q9BRJ2 306 aaKnown RBP6.58□□□□□ -1.36
SDCBP-203ENST00000424270 SLC12A9Q9BXP2 914 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 SLC29A3Q9BZD2 475 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 INTS2Q9H0H0 1204 aaKnown RBP6.58□□□□□ -1.36
SDCBP-203ENST00000424270 COMMD8Q9NX08 183 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 FOXJ2Q9P0K8 574 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 GULP1Q9UBP9 304 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 CYTH4Q9UIA0 394 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 ACSL6Q9UKU0 697 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 STRIP2Q9ULQ0 834 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 DOLKQ9UPQ8 538 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 CYP46A1Q9Y6A2 500 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 U3KQA8 63 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 NUMA1Q14980 2115 aa6.58□□□□□ -1.36
SDCBP-203ENST00000424270 SETD2Q9BYW2 2564 aaPredicted RBP6.58□□□□□ -1.36
SDCBP-203ENST00000424270 CENPEQ02224 2701 aa6.57□□□□□ -1.36
SDCBP-203ENST00000424270 A0A1W2PQ27 194 aa6.57□□□□□ -1.36
SDCBP-203ENST00000424270 A0A1W2PQ64 194 aa6.57□□□□□ -1.36
SDCBP-203ENST00000424270 A0A1W2PQC6 194 aa6.57□□□□□ -1.36
SDCBP-203ENST00000424270 A0A1W2PQH9 124 aa6.57□□□□□ -1.36
SDCBP-203ENST00000424270 EME2A4GXA9 379 aaPredicted RBP6.57□□□□□ -1.36
SDCBP-203ENST00000424270 GOLGA8IPA6NC78 632 aa6.57□□□□□ -1.36
SDCBP-203ENST00000424270 GOLGA8JA6NMD2 632 aa6.57□□□□□ -1.36
SDCBP-203ENST00000424270 PP2D1A8MPX8 630 aa6.57□□□□□ -1.36
SDCBP-203ENST00000424270 MKRN2OSH3BPM6 223 aa6.57□□□□□ -1.36
SDCBP-203ENST00000424270 AQP9O43315 295 aa6.57□□□□□ -1.36
SDCBP-203ENST00000424270 RPLP0P05388 317 aaKnown RBP6.57□□□□□ -1.36
SDCBP-203ENST00000424270 ZDHHC11BP0C7U3 371 aa6.57□□□□□ -1.36
SDCBP-203ENST00000424270 PLA2G4BP0C869 781 aa6.57□□□□□ -1.36
SDCBP-203ENST00000424270 LIFP15018 202 aa6.57□□□□□ -1.36
SDCBP-203ENST00000424270 TRIM21P19474 475 aaKnown RBP6.57□□□□□ -1.36
SDCBP-203ENST00000424270 HLA-FP30511 346 aa6.57□□□□□ -1.36
SDCBP-203ENST00000424270 DDIT3P35638 169 aa6.57□□□□□ -1.36
SDCBP-203ENST00000424270 NOP2P46087 812 aaKnown RBP6.57□□□□□ -1.36
SDCBP-203ENST00000424270 PGFP49763 221 aa6.57□□□□□ -1.36
SDCBP-203ENST00000424270 MAP3K7CLP57077 242 aa6.57□□□□□ -1.36
SDCBP-203ENST00000424270 BMT2Q1RMZ1 405 aa6.57□□□□□ -1.36
SDCBP-203ENST00000424270 TTC38Q5R3I4 469 aa6.57□□□□□ -1.36
SDCBP-203ENST00000424270 PHF19Q5T6S3 580 aa6.57□□□□□ -1.36
SDCBP-203ENST00000424270 CEP135Q66GS9 1140 aa6.57□□□□□ -1.36
SDCBP-203ENST00000424270 C16orf46Q6P387 395 aa6.57□□□□□ -1.36
SDCBP-203ENST00000424270 MCEMP1Q8IX19 187 aa6.57□□□□□ -1.36
SDCBP-203ENST00000424270 FBXL16Q8N461 479 aa6.57□□□□□ -1.36
SDCBP-203ENST00000424270 ZNF276Q8N554 614 aa6.57□□□□□ -1.36
SDCBP-203ENST00000424270 AADATQ8N5Z0 425 aa6.57□□□□□ -1.36
SDCBP-203ENST00000424270 OR13H1Q8NG92 308 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms