RNA–Protein interactions for RNA: ENST00000423698.6

ERCC1-204, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2 BASIC

Gene ERCC1, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-204ENST00000423698 SENP1Q9P0U3 644 aa12.09□□□□□ -0.47
ERCC1-204ENST00000423698 STX18Q9P2W9 335 aaKnown RBP12.09□□□□□ -0.47
ERCC1-204ENST00000423698 PCDHGB4Q9UN71 923 aa12.09□□□□□ -0.47
ERCC1-204ENST00000423698 PCDHGB5Q9Y5G0 923 aa12.09□□□□□ -0.47
ERCC1-204ENST00000423698 DOCK3Q8IZD9 2030 aa12.08□□□□□ -0.47
ERCC1-204ENST00000423698 CDH23Q9H251 3354 aa12.08□□□□□ -0.47
ERCC1-204ENST00000423698 CASTOR2A6NHX0 329 aa12.08□□□□□ -0.48
ERCC1-204ENST00000423698 PRR5-ARHGAP8B1AHC4 643 aa12.08□□□□□ -0.48
ERCC1-204ENST00000423698 BTBD19C9JJ37 291 aa12.08□□□□□ -0.48
ERCC1-204ENST00000423698 RFPL1O75677 317 aa12.08□□□□□ -0.48
ERCC1-204ENST00000423698 CDK7P50613 346 aa12.08□□□□□ -0.48
ERCC1-204ENST00000423698 ARHGAP8P85298 464 aa12.08□□□□□ -0.48
ERCC1-204ENST00000423698 SLC25A3Q00325 362 aa12.08□□□□□ -0.48
ERCC1-204ENST00000423698 DLG1Q12959 904 aa12.08□□□□□ -0.48
ERCC1-204ENST00000423698 FAM47CQ5HY64 1035 aa12.08□□□□□ -0.48
ERCC1-204ENST00000423698 N4BP2L1Q5TBK1 243 aaPredicted RBP12.08□□□□□ -0.48
ERCC1-204ENST00000423698 RGS9BPQ6ZS82 235 aa12.08□□□□□ -0.48
ERCC1-204ENST00000423698 CCDC80Q76M96 950 aa12.08□□□□□ -0.48
ERCC1-204ENST00000423698 SMYD1Q8NB12 490 aa12.08□□□□□ -0.48
ERCC1-204ENST00000423698 OXNAD1Q96HP4 312 aaPredicted RBP12.08□□□□□ -0.48
ERCC1-204ENST00000423698 FOXP3Q9BZS1 431 aa12.08□□□□□ -0.48
ERCC1-204ENST00000423698 PRDM12Q9H4Q4 367 aa12.08□□□□□ -0.48
ERCC1-204ENST00000423698 ASB7Q9H672 318 aa12.08□□□□□ -0.48
ERCC1-204ENST00000423698 SYBUQ9NX95 663 aa12.08□□□□□ -0.48
ERCC1-204ENST00000423698 NDE1Q9NXR1 346 aa12.08□□□□□ -0.48
ERCC1-204ENST00000423698 USP34Q70CQ2 3546 aa12.08□□□□□ -0.48
ERCC1-204ENST00000423698 SMIM28A0A1B0GU29 152 aa12.08□□□□□ -0.48
ERCC1-204ENST00000423698 KPNA7A9QM74 516 aa12.08□□□□□ -0.48
ERCC1-204ENST00000423698 ASLP04424 464 aa12.08□□□□□ -0.48
ERCC1-204ENST00000423698 DLDP09622 509 aaKnown RBP12.08□□□□□ -0.48
ERCC1-204ENST00000423698 USP17L7P0C7H9 530 aa12.08□□□□□ -0.48
ERCC1-204ENST00000423698 CYP2B6P20813 491 aa12.08□□□□□ -0.48
ERCC1-204ENST00000423698 KCTD21Q4G0X4 260 aa12.08□□□□□ -0.48
ERCC1-204ENST00000423698 HSF5Q4G112 596 aaPredicted RBP12.08□□□□□ -0.48
ERCC1-204ENST00000423698 BOLA3Q53S33 107 aa12.08□□□□□ -0.48
ERCC1-204ENST00000423698 FBXO47Q5MNV8 452 aa12.08□□□□□ -0.48
ERCC1-204ENST00000423698 C9orf57Q5W0N0 161 aa12.08□□□□□ -0.48
ERCC1-204ENST00000423698 ATG14Q6ZNE5 492 aa12.08□□□□□ -0.48
ERCC1-204ENST00000423698 RBM44Q6ZP01 1051 aaKnown RBP12.08□□□□□ -0.48
ERCC1-204ENST00000423698 ZNF534Q76KX8 674 aa12.08□□□□□ -0.48
ERCC1-204ENST00000423698 ST13P4Q8IZP2 240 aaPredicted RBP12.08□□□□□ -0.48
ERCC1-204ENST00000423698 ACVR1CQ8NER5 493 aa12.08□□□□□ -0.48
ERCC1-204ENST00000423698 NPLOC4Q8TAT6 608 aa12.08□□□□□ -0.48
ERCC1-204ENST00000423698 FNIP1Q8TF40 1166 aa12.08□□□□□ -0.48
ERCC1-204ENST00000423698 RNF34Q969K3 372 aa12.08□□□□□ -0.48
ERCC1-204ENST00000423698 LIN28AQ9H9Z2 209 aaKnown RBP12.08□□□□□ -0.48
ERCC1-204ENST00000423698 ANLNQ9NQW6 1124 aa12.08□□□□□ -0.48
ERCC1-204ENST00000423698 MTMR10Q9NXD2 777 aa12.08□□□□□ -0.48
ERCC1-204ENST00000423698 KLHL8Q9P2G9 620 aaPredicted RBP12.08□□□□□ -0.48
ERCC1-204ENST00000423698 ITGA11Q9UKX5 1188 aa12.08□□□□□ -0.48
ERCC1-204ENST00000423698 GMEB1Q9Y692 573 aa12.08□□□□□ -0.48
ERCC1-204ENST00000423698 AK5Q9Y6K8 562 aa12.08□□□□□ -0.48
ERCC1-204ENST00000423698 NRP1O14786 923 aa12.07□□□□□ -0.48
ERCC1-204ENST00000423698 ARL4AP40617 200 aa12.07□□□□□ -0.48
ERCC1-204ENST00000423698 SFT2D3Q587I9 215 aa12.07□□□□□ -0.48
ERCC1-204ENST00000423698 ZNF484Q5JVG2 852 aa12.07□□□□□ -0.48
ERCC1-204ENST00000423698 OSTM1Q86WC4 334 aa12.07□□□□□ -0.48
ERCC1-204ENST00000423698 GSTCDQ8NEC7 633 aa12.07□□□□□ -0.48
ERCC1-204ENST00000423698 P2RY11Q96G91 374 aa12.07□□□□□ -0.48
ERCC1-204ENST00000423698 MARK4Q96L34 752 aa12.07□□□□□ -0.48
ERCC1-204ENST00000423698 DNAJC16Q9Y2G8 782 aa12.07□□□□□ -0.48
ERCC1-204ENST00000423698 A0A0J9YVX5 310 aa12.07□□□□□ -0.48
ERCC1-204ENST00000423698 TMEM221A6NGB7 291 aa12.07□□□□□ -0.48
ERCC1-204ENST00000423698 ASB14A6NK59 587 aa12.07□□□□□ -0.48
ERCC1-204ENST00000423698 E7ESA3 106 aa12.07□□□□□ -0.48
ERCC1-204ENST00000423698 DGKIO75912 1065 aa12.07□□□□□ -0.48
ERCC1-204ENST00000423698 ETV4P43268 484 aa12.07□□□□□ -0.48
ERCC1-204ENST00000423698 CXCR3P49682 368 aa12.07□□□□□ -0.48
ERCC1-204ENST00000423698 MAP7Q14244 749 aa12.07□□□□□ -0.48
ERCC1-204ENST00000423698 PRKD1Q15139 912 aaPredicted RBP12.07□□□□□ -0.48
ERCC1-204ENST00000423698 FASTKD1Q53R41 847 aaKnown RBP12.07□□□□□ -0.48
ERCC1-204ENST00000423698 CERCAMQ5T4B2 595 aa12.07□□□□□ -0.48
ERCC1-204ENST00000423698 NCBP2-AS2Q69YL0 99 aa12.07□□□□□ -0.48
ERCC1-204ENST00000423698 RWDD4Q6NW29 188 aaKnown RBP12.07□□□□□ -0.48
ERCC1-204ENST00000423698 GPRIN1Q7Z2K8 1008 aa12.07□□□□□ -0.48
ERCC1-204ENST00000423698 ADGRF2Q8IZF7 708 aa12.07□□□□□ -0.48
ERCC1-204ENST00000423698 APPL2Q8NEU8 664 aa12.07□□□□□ -0.48
ERCC1-204ENST00000423698 BEST2Q8NFU1 509 aa12.07□□□□□ -0.48
ERCC1-204ENST00000423698 PIP4K2CQ8TBX8 421 aa12.07□□□□□ -0.48
ERCC1-204ENST00000423698 HTR3CQ8WXA8 447 aa12.07□□□□□ -0.48
ERCC1-204ENST00000423698 SGF29Q96ES7 293 aa12.07□□□□□ -0.48
ERCC1-204ENST00000423698 SIGLEC10Q96LC7 697 aa12.07□□□□□ -0.48
ERCC1-204ENST00000423698 ZNF778Q96MU6 729 aa12.07□□□□□ -0.48
ERCC1-204ENST00000423698 PANX3Q96QZ0 392 aa12.07□□□□□ -0.48
ERCC1-204ENST00000423698 FAM192AQ9GZU8 254 aa12.07□□□□□ -0.48
ERCC1-204ENST00000423698 TXNDC16Q9P2K2 825 aa12.07□□□□□ -0.48
ERCC1-204ENST00000423698 PPP2R3BQ9Y5P8 575 aa12.07□□□□□ -0.48
ERCC1-204ENST00000423698 TRIP12Q14669 1992 aaPredicted RBP12.07□□□□□ -0.48
ERCC1-204ENST00000423698 F8W810 466 aa12.06□□□□□ -0.48
ERCC1-204ENST00000423698 C2CD2LO14523 706 aa12.06□□□□□ -0.48
ERCC1-204ENST00000423698 EPHX2P34913 555 aa12.06□□□□□ -0.48
ERCC1-204ENST00000423698 GABRB2P47870 512 aa12.06□□□□□ -0.48
ERCC1-204ENST00000423698 AQP4P55087 323 aa12.06□□□□□ -0.48
ERCC1-204ENST00000423698 IRF9Q00978 393 aa12.06□□□□□ -0.48
ERCC1-204ENST00000423698 ZNF460Q14592 562 aa12.06□□□□□ -0.48
ERCC1-204ENST00000423698 HSP90AA5PQ58FG0 334 aa12.06□□□□□ -0.48
ERCC1-204ENST00000423698 RALGPS1Q5JS13 557 aa12.06□□□□□ -0.48
ERCC1-204ENST00000423698 PPP1R2P3Q6NXS1 205 aa12.06□□□□□ -0.48
ERCC1-204ENST00000423698 RNF148Q8N7C7 305 aa12.06□□□□□ -0.48
ERCC1-204ENST00000423698 SNX31Q8N9S9 440 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms