RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 FCRL2Q96LA5 508 aaPredicted RBP9.97□□□□□ -0.81
CMSS1-201ENST00000421999 TRMT6Q9UJA5 497 aaKnown RBP9.97□□□□□ -0.81
CMSS1-201ENST00000421999 DCTN4Q9UJW0 460 aa9.97□□□□□ -0.81
CMSS1-201ENST00000421999 SLC13A4Q9UKG4 626 aa9.97□□□□□ -0.81
CMSS1-201ENST00000421999 NEDD8-MDP1E9PL57 170 aa9.97□□□□□ -0.81
CMSS1-201ENST00000421999 PAPSS1O43252 624 aaPredicted RBP9.97□□□□□ -0.81
CMSS1-201ENST00000421999 MMP13P45452 471 aa9.97□□□□□ -0.81
CMSS1-201ENST00000421999 TCEA2Q15560 299 aa9.97□□□□□ -0.81
CMSS1-201ENST00000421999 RAB30Q15771 203 aa9.97□□□□□ -0.81
CMSS1-201ENST00000421999 PTAR1Q7Z6K3 402 aaPredicted RBP9.97□□□□□ -0.81
CMSS1-201ENST00000421999 TRIM55Q9BYV6 548 aa9.97□□□□□ -0.81
CMSS1-201ENST00000421999 BCO2Q9BYV7 579 aa9.97□□□□□ -0.81
CMSS1-201ENST00000421999 FRMD8Q9BZ67 464 aaPredicted RBP9.97□□□□□ -0.81
CMSS1-201ENST00000421999 MIR1-1HGQ9H1L0 117 aa9.97□□□□□ -0.81
CMSS1-201ENST00000421999 TRABDQ9H4I3 376 aa9.97□□□□□ -0.81
CMSS1-201ENST00000421999 SAGE1Q9NXZ1 904 aa9.97□□□□□ -0.81
CMSS1-201ENST00000421999 VPS9D1Q9Y2B5 631 aa9.97□□□□□ -0.81
CMSS1-201ENST00000421999 RNF103O00237 685 aa9.96□□□□□ -0.81
CMSS1-201ENST00000421999 ZNF623O75123 536 aa9.96□□□□□ -0.81
CMSS1-201ENST00000421999 LUC7L3O95232 432 aaKnown RBP9.96□□□□□ -0.81
CMSS1-201ENST00000421999 SERPINA4P29622 427 aa9.96□□□□□ -0.81
CMSS1-201ENST00000421999 WASP42768 502 aa9.96□□□□□ -0.81
CMSS1-201ENST00000421999 THOP1P52888 689 aa9.96□□□□□ -0.81
CMSS1-201ENST00000421999 VCPP55072 806 aaKnown RBP9.96□□□□□ -0.81
CMSS1-201ENST00000421999 ART3Q13508 389 aa9.96□□□□□ -0.81
CMSS1-201ENST00000421999 ACOX1Q15067 660 aa9.96□□□□□ -0.81
CMSS1-201ENST00000421999 ARMC12Q5T9G4 340 aa9.96□□□□□ -0.81
CMSS1-201ENST00000421999 LRRC6Q86X45 466 aa9.96□□□□□ -0.81
CMSS1-201ENST00000421999 CLEC4CQ8WTT0 213 aa9.96□□□□□ -0.81
CMSS1-201ENST00000421999 LRRN4Q8WUT4 740 aa9.96□□□□□ -0.81
CMSS1-201ENST00000421999 USP6NLQ92738 828 aa9.96□□□□□ -0.81
CMSS1-201ENST00000421999 FOXP3Q9BZS1 431 aa9.96□□□□□ -0.81
CMSS1-201ENST00000421999 ZYG11BQ9C0D3 744 aa9.96□□□□□ -0.81
CMSS1-201ENST00000421999 LRRC40Q9H9A6 602 aa9.96□□□□□ -0.81
CMSS1-201ENST00000421999 MPP6Q9NZW5 540 aa9.96□□□□□ -0.81
CMSS1-201ENST00000421999 PER2O15055 1255 aa9.96□□□□□ -0.81
CMSS1-201ENST00000421999 MYO1DO94832 1006 aa9.96□□□□□ -0.81
CMSS1-201ENST00000421999 PTPN2P17706 415 aa9.96□□□□□ -0.81
CMSS1-201ENST00000421999 AARS2Q5JTZ9 985 aaKnown RBP9.96□□□□□ -0.81
CMSS1-201ENST00000421999 NPNTQ6UXI9 565 aa9.96□□□□□ -0.81
CMSS1-201ENST00000421999 C15orf39Q6ZRI6 1047 aa9.96□□□□□ -0.81
CMSS1-201ENST00000421999 OSTM1Q86WC4 334 aa9.96□□□□□ -0.81
CMSS1-201ENST00000421999 CPNE8Q86YQ8 564 aa9.96□□□□□ -0.81
CMSS1-201ENST00000421999 ARL14EPQ8N8R7 260 aaPredicted RBP9.96□□□□□ -0.81
CMSS1-201ENST00000421999 HJURPQ8NCD3 748 aaPredicted RBP9.96□□□□□ -0.81
CMSS1-201ENST00000421999 SCAMP5Q8TAC9 235 aa9.96□□□□□ -0.81
CMSS1-201ENST00000421999 FAXDC2Q96IV6 333 aa9.96□□□□□ -0.81
CMSS1-201ENST00000421999 RIPOR3Q96MK2 946 aa9.96□□□□□ -0.81
CMSS1-201ENST00000421999 CCDC160A6NGH7 325 aa9.96□□□□□ -0.82
CMSS1-201ENST00000421999 SUPT3HB4E1H0 165 aa9.96□□□□□ -0.82
CMSS1-201ENST00000421999 PIRO00625 290 aa9.96□□□□□ -0.82
CMSS1-201ENST00000421999 LRCH4O75427 683 aa9.96□□□□□ -0.82
CMSS1-201ENST00000421999 SUPT3HO75486 399 aa9.96□□□□□ -0.82
CMSS1-201ENST00000421999 SPAG6O75602 509 aa9.96□□□□□ -0.82
CMSS1-201ENST00000421999 ANP32DO95626 131 aa9.96□□□□□ -0.82
CMSS1-201ENST00000421999 ERCC2P18074 760 aa9.96□□□□□ -0.82
CMSS1-201ENST00000421999 SLC11A1P49279 550 aa9.96□□□□□ -0.82
CMSS1-201ENST00000421999 POLR2LP62875 67 aaKnown RBP9.96□□□□□ -0.82
CMSS1-201ENST00000421999 SPDYAQ5MJ70 313 aa9.96□□□□□ -0.82
CMSS1-201ENST00000421999 TRMT10CQ7L0Y3 403 aaKnown RBP9.96□□□□□ -0.82
CMSS1-201ENST00000421999 MYOCQ99972 504 aa9.96□□□□□ -0.82
CMSS1-201ENST00000421999 FRMD8P1Q9BZ68 369 aaPredicted RBP9.96□□□□□ -0.82
CMSS1-201ENST00000421999 NUF2Q9BZD4 464 aa9.96□□□□□ -0.82
CMSS1-201ENST00000421999 POLR1EQ9GZS1 481 aaKnown RBP9.96□□□□□ -0.82
CMSS1-201ENST00000421999 PTGESO14684 152 aa9.96□□□□□ -0.82
CMSS1-201ENST00000421999 VCLP18206 1134 aa9.96□□□□□ -0.82
CMSS1-201ENST00000421999 TYMPP19971 482 aa9.96□□□□□ -0.82
CMSS1-201ENST00000421999 SERPINB9P50453 376 aa9.96□□□□□ -0.82
CMSS1-201ENST00000421999 DMTNQ08495 405 aa9.96□□□□□ -0.82
CMSS1-201ENST00000421999 IFT88Q13099 833 aa9.96□□□□□ -0.82
CMSS1-201ENST00000421999 PLCL1Q15111 1095 aa9.96□□□□□ -0.82
CMSS1-201ENST00000421999 LRRC38Q5VT99 294 aa9.96□□□□□ -0.82
CMSS1-201ENST00000421999 ACAD11Q709F0 780 aa9.96□□□□□ -0.82
CMSS1-201ENST00000421999 FUKQ8N0W3 1084 aa9.96□□□□□ -0.82
CMSS1-201ENST00000421999 CRYBG2Q8N1P7 616 aa9.96□□□□□ -0.82
CMSS1-201ENST00000421999 GIMAP7Q8NHV1 300 aa9.96□□□□□ -0.82
CMSS1-201ENST00000421999 SKA1Q96BD8 255 aa9.96□□□□□ -0.82
CMSS1-201ENST00000421999 SUSD3Q96L08 255 aa9.96□□□□□ -0.82
CMSS1-201ENST00000421999 ELAC2Q9BQ52 826 aaKnown RBP9.96□□□□□ -0.82
CMSS1-201ENST00000421999 NRDE2Q9H7Z3 1164 aa9.96□□□□□ -0.82
CMSS1-201ENST00000421999 RGS18Q9NS28 235 aa9.96□□□□□ -0.82
CMSS1-201ENST00000421999 GDAP2Q9NXN4 497 aa9.96□□□□□ -0.82
CMSS1-201ENST00000421999 STK39Q9UEW8 545 aa9.96□□□□□ -0.82
CMSS1-201ENST00000421999 APOBEC2Q9Y235 224 aaKnown RBP9.96□□□□□ -0.82
CMSS1-201ENST00000421999 TMEM247A6NEH6 219 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 TXNDC9O14530 226 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 ADH1CP00326 375 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 SNRPAP09012 282 aaKnown RBP9.95□□□□□ -0.82
CMSS1-201ENST00000421999 GOT1P17174 413 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 CST5P28325 142 aaPredicted RBP9.95□□□□□ -0.82
CMSS1-201ENST00000421999 RBL1P28749 1068 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 AFF1P51825 1210 aaKnown RBP9.95□□□□□ -0.82
CMSS1-201ENST00000421999 ARHGAP17Q68EM7 881 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 DOK6Q6PKX4 331 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 TMCO2Q7Z6W1 182 aaPredicted RBP9.95□□□□□ -0.82
CMSS1-201ENST00000421999 C10orf67Q8IYJ2 551 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 KLHDC9Q8NEP7 349 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 LRGUKQ96M69 825 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 NAT9Q9BTE0 207 aa9.95□□□□□ -0.82
CMSS1-201ENST00000421999 UPF3AQ9H1J1 476 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms