RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 ABCG1P45844 678 aa21.76■■□□□ 1.07
USP48-205ENST00000421625 CCR10P46092 362 aa21.76■■□□□ 1.07
USP48-205ENST00000421625 NUMBP49757 651 aa21.76■■□□□ 1.07
USP48-205ENST00000421625 NR1H2P55055 460 aa21.76■■□□□ 1.07
USP48-205ENST00000421625 LAMTOR4Q0VGL1 99 aa21.76■■□□□ 1.07
USP48-205ENST00000421625 DCTN2Q13561 401 aaKnown RBP21.76■■□□□ 1.07
USP48-205ENST00000421625 CYTH1Q15438 398 aa21.76■■□□□ 1.07
USP48-205ENST00000421625 HEATR6Q6AI08 1181 aaKnown RBP21.76■■□□□ 1.07
USP48-205ENST00000421625 DCLK2Q8N568 766 aa21.76■■□□□ 1.07
USP48-205ENST00000421625 CATSPER1Q8NEC5 780 aa21.76■■□□□ 1.07
USP48-205ENST00000421625 SLC16A10Q8TF71 515 aa21.76■■□□□ 1.07
USP48-205ENST00000421625 QKIQ96PU8 341 aaKnown RBP eCLIP21.76■■□□□ 1.071e-20■■■■□ 20
USP48-205ENST00000421625 FERMT1Q9BQL6 677 aa21.76■■□□□ 1.07
USP48-205ENST00000421625 SYBUQ9NX95 663 aa21.76■■□□□ 1.07
USP48-205ENST00000421625 TSPAN16Q9UKR8 245 aa21.76■■□□□ 1.07
USP48-205ENST00000421625 ZNF510Q9Y2H8 683 aa21.76■■□□□ 1.07
USP48-205ENST00000421625 WNT10BO00744 389 aa21.76■■□□□ 1.07
USP48-205ENST00000421625 CHRNGP07510 517 aa21.76■■□□□ 1.07
USP48-205ENST00000421625 PFKMP08237 780 aa21.76■■□□□ 1.07
USP48-205ENST00000421625 MPSTP25325 297 aa21.76■■□□□ 1.07
USP48-205ENST00000421625 EPHA3P29320 983 aa21.76■■□□□ 1.07
USP48-205ENST00000421625 IRF9Q00978 393 aa21.76■■□□□ 1.07
USP48-205ENST00000421625 DALRD3Q5D0E6 543 aaKnown RBP21.76■■□□□ 1.07
USP48-205ENST00000421625 FKBP1CQ5VVH2 108 aa21.76■■□□□ 1.07
USP48-205ENST00000421625 ZFP1Q6P2D0 407 aa21.76■■□□□ 1.07
USP48-205ENST00000421625 DDI1Q8WTU0 396 aa21.76■■□□□ 1.07
USP48-205ENST00000421625 DHX35Q9H5Z1 703 aaKnown RBP21.76■■□□□ 1.07
USP48-205ENST00000421625 LIN28AQ9H9Z2 209 aaKnown RBP21.76■■□□□ 1.07
USP48-205ENST00000421625 GBA2Q9HCG7 927 aaPredicted RBP21.76■■□□□ 1.07
USP48-205ENST00000421625 TXNDC16Q9P2K2 825 aa21.76■■□□□ 1.07
USP48-205ENST00000421625 RGSL1A5PLK6 1076 aa21.75■■□□□ 1.07
USP48-205ENST00000421625 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.75■■□□□ 1.07
USP48-205ENST00000421625 G3V2L1 256 aa21.75■■□□□ 1.07
USP48-205ENST00000421625 NOP56O00567 594 aaKnown RBP21.75■■□□□ 1.07
USP48-205ENST00000421625 LTFP02788 710 aa21.75■■□□□ 1.07
USP48-205ENST00000421625 VDRP11473 427 aa21.75■■□□□ 1.07
USP48-205ENST00000421625 GTF2A2P52657 109 aa21.75■■□□□ 1.07
USP48-205ENST00000421625 COG7P83436 770 aa21.75■■□□□ 1.07
USP48-205ENST00000421625 PPP2R5DQ14738 602 aa21.75■■□□□ 1.07
USP48-205ENST00000421625 MPZL3Q6UWV2 235 aa21.75■■□□□ 1.07
USP48-205ENST00000421625 C12orf29Q8N999 325 aa21.75■■□□□ 1.07
USP48-205ENST00000421625 REPS2Q8NFH8 660 aa21.75■■□□□ 1.07
USP48-205ENST00000421625 SNRNP27Q8WVK2 155 aaKnown RBP21.75■■□□□ 1.07
USP48-205ENST00000421625 LZICQ8WZA0 190 aa21.75■■□□□ 1.07
USP48-205ENST00000421625 IRGQQ8WZA9 623 aa21.75■■□□□ 1.07
USP48-205ENST00000421625 TMIGD2Q96BF3 282 aa21.75■■□□□ 1.07
USP48-205ENST00000421625 SLC2A11Q9BYW1 496 aa21.75■■□□□ 1.07
USP48-205ENST00000421625 TRIP11Q15643 1979 aa21.75■■□□□ 1.07
USP48-205ENST00000421625 PRSS51A0A1B0GVH4 220 aa21.75■■□□□ 1.07
USP48-205ENST00000421625 GPR25O00155 361 aa21.75■■□□□ 1.07
USP48-205ENST00000421625 MAFO75444 373 aaPredicted RBP21.75■■□□□ 1.07
USP48-205ENST00000421625 GJB1P08034 283 aa21.75■■□□□ 1.07
USP48-205ENST00000421625 PGAM1P18669 254 aa21.75■■□□□ 1.07
USP48-205ENST00000421625 SDC4P31431 198 aa21.75■■□□□ 1.07
USP48-205ENST00000421625 DLG2Q15700 870 aa21.75■■□□□ 1.07
USP48-205ENST00000421625 TMEM132AQ24JP5 1023 aa21.75■■□□□ 1.07
USP48-205ENST00000421625 LSM12Q3MHD2 195 aaKnown RBP21.75■■□□□ 1.07
USP48-205ENST00000421625 METTL21CQ5VZV1 264 aa21.75■■□□□ 1.07
USP48-205ENST00000421625 FAM156AQ8NDB6 213 aa21.75■■□□□ 1.07
USP48-205ENST00000421625 PTPN1P18031 435 aaKnown RBP21.75■■□□□ 1.07
USP48-205ENST00000421625 NELFEP18615 380 aaKnown RBP21.75■■□□□ 1.07
USP48-205ENST00000421625 TCN1P20061 433 aaPredicted RBP21.75■■□□□ 1.07
USP48-205ENST00000421625 SERPINB8P50452 374 aa21.75■■□□□ 1.07
USP48-205ENST00000421625 PPIDQ08752 370 aaKnown RBP21.75■■□□□ 1.07
USP48-205ENST00000421625 CCDC153Q494R4 210 aa21.75■■□□□ 1.07
USP48-205ENST00000421625 ACBD5Q5T8D3 534 aaPredicted RBP21.75■■□□□ 1.07
USP48-205ENST00000421625 TMEM198Q66K66 360 aa21.75■■□□□ 1.07
USP48-205ENST00000421625 BORAQ6PGQ7 559 aa21.75■■□□□ 1.07
USP48-205ENST00000421625 TMEM126BQ8IUX1 230 aa21.75■■□□□ 1.07
USP48-205ENST00000421625 MARK4Q96L34 752 aa21.75■■□□□ 1.07
USP48-205ENST00000421625 ZNF512Q96ME7 567 aaPredicted RBP21.75■■□□□ 1.07
USP48-205ENST00000421625 LGMNQ99538 433 aa21.75■■□□□ 1.07
USP48-205ENST00000421625 CAB39LQ9H9S4 337 aa21.75■■□□□ 1.07
USP48-205ENST00000421625 MORF4L1Q9UBU8 362 aa21.75■■□□□ 1.07
USP48-205ENST00000421625 OLIG2Q13516 323 aa21.74■■□□□ 1.07
USP48-205ENST00000421625 NRF1Q16656 503 aa21.74■■□□□ 1.07
USP48-205ENST00000421625 OLFML1Q6UWY5 402 aa21.74■■□□□ 1.07
USP48-205ENST00000421625 COLGALT1Q8NBJ5 622 aa21.74■■□□□ 1.07
USP48-205ENST00000421625 CNKSR2Q8WXI2 1034 aa21.74■■□□□ 1.07
USP48-205ENST00000421625 KHSRPQ92945 711 aaKnown RBP eCLIP21.74■■□□□ 1.072e-7■■□□□ 13.9
USP48-205ENST00000421625 SLC4A5Q9BY07 1137 aa21.74■■□□□ 1.07
USP48-205ENST00000421625 DTLQ9NZJ0 730 aa21.74■■□□□ 1.07
USP48-205ENST00000421625 ZNF214Q9UL59 606 aaPredicted RBP21.74■■□□□ 1.07
USP48-205ENST00000421625 HES2Q9Y543 173 aa21.74■■□□□ 1.07
USP48-205ENST00000421625 MDM4O15151 490 aa21.74■■□□□ 1.07
USP48-205ENST00000421625 RNASEH2AO75792 299 aaKnown RBP21.74■■□□□ 1.07
USP48-205ENST00000421625 P4HA1P13674 534 aa21.74■■□□□ 1.07
USP48-205ENST00000421625 GP5P40197 560 aa21.74■■□□□ 1.07
USP48-205ENST00000421625 NDST1P52848 882 aa21.74■■□□□ 1.07
USP48-205ENST00000421625 ATF7IP2Q5U623 682 aa21.74■■□□□ 1.07
USP48-205ENST00000421625 LRRC8BQ6P9F7 803 aa21.74■■□□□ 1.07
USP48-205ENST00000421625 SCUBE3Q8IX30 993 aa21.74■■□□□ 1.07
USP48-205ENST00000421625 TMEM102Q8N9M5 508 aaPredicted RBP21.74■■□□□ 1.07
USP48-205ENST00000421625 MIPOL1Q8TD10 442 aa21.74■■□□□ 1.07
USP48-205ENST00000421625 DIS3LQ8TF46 1054 aaKnown RBP21.74■■□□□ 1.07
USP48-205ENST00000421625 HSPBAP1Q96EW2 488 aa21.74■■□□□ 1.07
USP48-205ENST00000421625 NRBP2Q9NSY0 501 aa21.74■■□□□ 1.07
USP48-205ENST00000421625 AFG3L2Q9Y4W6 797 aa21.74■■□□□ 1.07
USP48-205ENST00000421625 IGKV6D-21A0A0A0MT36 114 aa21.73■■□□□ 1.07
USP48-205ENST00000421625 CCDC130P13994 396 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms