RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 PCDH18Q9HCL0 1135 aa17.02■□□□□ 0.31
PKP4-204ENST00000421462 ANKRD12Q6UB98 2062 aa17.02■□□□□ 0.31
PKP4-204ENST00000421462 TRIP11Q15643 1979 aa17.01■□□□□ 0.31
PKP4-204ENST00000421462 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.01■□□□□ 0.31
PKP4-204ENST00000421462 ATG7O95352 703 aa17.01■□□□□ 0.31
PKP4-204ENST00000421462 HDCP19113 662 aa17.01■□□□□ 0.31
PKP4-204ENST00000421462 CYP2F1P24903 491 aa17.01■□□□□ 0.31
PKP4-204ENST00000421462 ZNF143P52747 638 aaPredicted RBP17.01■□□□□ 0.31
PKP4-204ENST00000421462 MGAT5BQ3V5L5 792 aa17.01■□□□□ 0.31
PKP4-204ENST00000421462 WDR49Q8IV35 697 aa17.01■□□□□ 0.31
PKP4-204ENST00000421462 TMEM192Q8IY95 271 aa17.01■□□□□ 0.31
PKP4-204ENST00000421462 LRRC71Q8N4P6 559 aa17.01■□□□□ 0.31
PKP4-204ENST00000421462 AGAP2Q99490 1192 aa17.01■□□□□ 0.31
PKP4-204ENST00000421462 SLC29A1Q99808 456 aa17.01■□□□□ 0.31
PKP4-204ENST00000421462 CNPY3Q9BT09 278 aa17.01■□□□□ 0.31
PKP4-204ENST00000421462 GCOM2Q9BZD3 368 aaPredicted RBP17.01■□□□□ 0.31
PKP4-204ENST00000421462 RNF146Q9NTX7 359 aa17.01■□□□□ 0.31
PKP4-204ENST00000421462 TPST1O60507 370 aa17.01■□□□□ 0.31
PKP4-204ENST00000421462 TNNC2P02585 160 aa17.01■□□□□ 0.31
PKP4-204ENST00000421462 GJB1P08034 283 aa17.01■□□□□ 0.31
PKP4-204ENST00000421462 PTPN11Q06124 597 aaPredicted RBP17.01■□□□□ 0.31
PKP4-204ENST00000421462 FSTL1Q12841 308 aa17.01■□□□□ 0.31
PKP4-204ENST00000421462 CAPSQ13938 189 aa17.01■□□□□ 0.31
PKP4-204ENST00000421462 FAM219BQ5XKK7 198 aa17.01■□□□□ 0.31
PKP4-204ENST00000421462 IL31Q6EBC2 164 aa17.01■□□□□ 0.31
PKP4-204ENST00000421462 GRAMD4Q6IC98 578 aa17.01■□□□□ 0.31
PKP4-204ENST00000421462 XKR5Q6UX68 686 aa17.01■□□□□ 0.31
PKP4-204ENST00000421462 CYP4V2Q6ZWL3 525 aaPredicted RBP17.01■□□□□ 0.31
PKP4-204ENST00000421462 ZNF786Q8N393 782 aa17.01■□□□□ 0.31
PKP4-204ENST00000421462 SMYD1Q8NB12 490 aa17.01■□□□□ 0.31
PKP4-204ENST00000421462 CCNYQ8ND76 341 aa17.01■□□□□ 0.31
PKP4-204ENST00000421462 CATSPER1Q8NEC5 780 aa17.01■□□□□ 0.31
PKP4-204ENST00000421462 FNIP1Q8TF40 1166 aa17.01■□□□□ 0.31
PKP4-204ENST00000421462 SCYL1Q96KG9 808 aa17.01■□□□□ 0.31
PKP4-204ENST00000421462 ACO2Q99798 780 aaKnown RBP17.01■□□□□ 0.31
PKP4-204ENST00000421462 NOL11Q9H8H0 719 aaKnown RBP17.01■□□□□ 0.31
PKP4-204ENST00000421462 SYBUQ9NX95 663 aa17.01■□□□□ 0.31
PKP4-204ENST00000421462 MOCS1Q9NZB8 636 aa17.01■□□□□ 0.31
PKP4-204ENST00000421462 CDC14AQ9UNH5 594 aa17.01■□□□□ 0.31
PKP4-204ENST00000421462 NPR1P16066 1061 aa17■□□□□ 0.31
PKP4-204ENST00000421462 CCND2P30279 289 aa17■□□□□ 0.31
PKP4-204ENST00000421462 AVPR1AP37288 418 aa17■□□□□ 0.31
PKP4-204ENST00000421462 SULT2A1Q06520 285 aa17■□□□□ 0.31
PKP4-204ENST00000421462 PTK2BQ14289 1009 aa17■□□□□ 0.31
PKP4-204ENST00000421462 XKR3Q5GH77 459 aa17■□□□□ 0.31
PKP4-204ENST00000421462 PIGGQ5H8A4 983 aa17■□□□□ 0.31
PKP4-204ENST00000421462 ERI1Q8IV48 349 aaKnown RBP17■□□□□ 0.31
PKP4-204ENST00000421462 SPATA6LQ8N4H0 392 aa17■□□□□ 0.31
PKP4-204ENST00000421462 CCNYL1Q8N7R7 359 aa17■□□□□ 0.31
PKP4-204ENST00000421462 FAM47BQ8NA70 645 aa17■□□□□ 0.31
PKP4-204ENST00000421462 B3GNT5Q9BYG0 378 aa17■□□□□ 0.31
PKP4-204ENST00000421462 ELOVL4Q9GZR5 314 aa17■□□□□ 0.31
PKP4-204ENST00000421462 TMEM233B4DJY2 109 aa17■□□□□ 0.31
PKP4-204ENST00000421462 TK2O00142 265 aa17■□□□□ 0.31
PKP4-204ENST00000421462 RGS20O76081 388 aa17■□□□□ 0.31
PKP4-204ENST00000421462 PIGNO95427 931 aa17■□□□□ 0.31
PKP4-204ENST00000421462 MYL4P12829 197 aa17■□□□□ 0.31
PKP4-204ENST00000421462 KCNA2P16389 499 aa17■□□□□ 0.31
PKP4-204ENST00000421462 ACAT1P24752 427 aaKnown RBP17■□□□□ 0.31
PKP4-204ENST00000421462 ALDH1B1P30837 517 aa17■□□□□ 0.31
PKP4-204ENST00000421462 CDH5P33151 784 aaPredicted RBP17■□□□□ 0.31
PKP4-204ENST00000421462 THAP11Q96EK4 314 aa17■□□□□ 0.31
PKP4-204ENST00000421462 RMND5BQ96G75 393 aaPredicted RBP17■□□□□ 0.31
PKP4-204ENST00000421462 GATA5Q9BWX5 397 aaPredicted RBP17■□□□□ 0.31
PKP4-204ENST00000421462 PORCNQ9H237 461 aa17■□□□□ 0.31
PKP4-204ENST00000421462 SELENONQ9NZV5 590 aa17■□□□□ 0.31
PKP4-204ENST00000421462 PCDHB12Q9Y5F1 795 aa17■□□□□ 0.31
PKP4-204ENST00000421462 STYXL1Q9Y6J8 313 aa17■□□□□ 0.31
PKP4-204ENST00000421462 SCN9AQ15858 1988 aa17■□□□□ 0.31
PKP4-204ENST00000421462 A0A096LPK6 155 aa17■□□□□ 0.31
PKP4-204ENST00000421462 MT-CO1P00395 513 aa17■□□□□ 0.31
PKP4-204ENST00000421462 CXCL8P10145 99 aa17■□□□□ 0.31
PKP4-204ENST00000421462 STRA8Q7Z7C7 330 aa17■□□□□ 0.31
PKP4-204ENST00000421462 SLC4A11Q8NBS3 891 aa17■□□□□ 0.31
PKP4-204ENST00000421462 ILKAPQ9H0C8 392 aaPredicted RBP17■□□□□ 0.31
PKP4-204ENST00000421462 MYRFQ9Y2G1 1151 aa17■□□□□ 0.31
PKP4-204ENST00000421462 SAC3D1A6NKF1 404 aa16.99■□□□□ 0.31
PKP4-204ENST00000421462 BTBD19C9JJ37 291 aa16.99■□□□□ 0.31
PKP4-204ENST00000421462 GIPC1O14908 333 aa16.99■□□□□ 0.31
PKP4-204ENST00000421462 VAPBO95292 243 aa16.99■□□□□ 0.31
PKP4-204ENST00000421462 CLIC3O95833 236 aa16.99■□□□□ 0.31
PKP4-204ENST00000421462 NAMPTP43490 491 aa16.99■□□□□ 0.31
PKP4-204ENST00000421462 HARS2P49590 506 aaKnown RBP16.99■□□□□ 0.31
PKP4-204ENST00000421462 NAGLUP54802 743 aa16.99■□□□□ 0.31
PKP4-204ENST00000421462 OGFOD2Q6N063 350 aa16.99■□□□□ 0.31
PKP4-204ENST00000421462 GK5Q6ZS86 529 aa16.99■□□□□ 0.31
PKP4-204ENST00000421462 VSIG10LQ86VR7 867 aa16.99■□□□□ 0.31
PKP4-204ENST00000421462 COLGALT1Q8NBJ5 622 aa16.99■□□□□ 0.31
PKP4-204ENST00000421462 RNF149Q8NC42 400 aa16.99■□□□□ 0.31
PKP4-204ENST00000421462 ACVR1CQ8NER5 493 aa16.99■□□□□ 0.31
PKP4-204ENST00000421462 LRRC39Q96DD0 335 aa16.99■□□□□ 0.31
PKP4-204ENST00000421462 ATG4CQ96DT6 458 aa16.99■□□□□ 0.31
PKP4-204ENST00000421462 SGF29Q96ES7 293 aa16.99■□□□□ 0.31
PKP4-204ENST00000421462 APBA2Q99767 749 aa16.99■□□□□ 0.31
PKP4-204ENST00000421462 APOL2Q9BQE5 337 aa16.99■□□□□ 0.31
PKP4-204ENST00000421462 YIPF2Q9BWQ6 316 aa16.99■□□□□ 0.31
PKP4-204ENST00000421462 FAM96AQ9H5X1 160 aa16.99■□□□□ 0.31
PKP4-204ENST00000421462 ZNF302Q9NR11 478 aa16.99■□□□□ 0.31
PKP4-204ENST00000421462 ZNF70Q9UC06 446 aaPredicted RBP16.99■□□□□ 0.31
PKP4-204ENST00000421462 H6PDO95479 791 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms