RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 CDH4P55283 916 aa19.22■□□□□ 0.67
PTCD3-204ENST00000418628 DMC1Q14565 340 aa19.22■□□□□ 0.67
PTCD3-204ENST00000418628 PTPRNQ16849 979 aa19.22■□□□□ 0.67
PTCD3-204ENST00000418628 FAM72AQ5TYM5 149 aa19.22■□□□□ 0.67
PTCD3-204ENST00000418628 FAM72DQ6L9T8 149 aa19.22■□□□□ 0.67
PTCD3-204ENST00000418628 H2AFVQ71UI9 128 aa19.22■□□□□ 0.67
PTCD3-204ENST00000418628 TRMT11Q7Z4G4 463 aaKnown RBP19.22■□□□□ 0.67
PTCD3-204ENST00000418628 FAM72BQ86X60 149 aa19.22■□□□□ 0.67
PTCD3-204ENST00000418628 CARNMT1Q8N4J0 409 aa19.22■□□□□ 0.67
PTCD3-204ENST00000418628 TXNDC5Q8NBS9 432 aaKnown RBP19.22■□□□□ 0.67
PTCD3-204ENST00000418628 OR52K2Q8NGK3 314 aa19.22■□□□□ 0.67
PTCD3-204ENST00000418628 TTC17Q96AE7 1141 aa19.22■□□□□ 0.67
PTCD3-204ENST00000418628 ALG14Q96F25 216 aa19.22■□□□□ 0.67
PTCD3-204ENST00000418628 ACOX2Q99424 681 aa19.22■□□□□ 0.67
PTCD3-204ENST00000418628 FAM126AQ9BYI3 521 aaPredicted RBP19.22■□□□□ 0.67
PTCD3-204ENST00000418628 MAGEB5Q9BZ81 275 aa19.22■□□□□ 0.67
PTCD3-204ENST00000418628 ZDHHC4Q9NPG8 344 aa19.22■□□□□ 0.67
PTCD3-204ENST00000418628 UVRAGQ9P2Y5 699 aa19.22■□□□□ 0.67
PTCD3-204ENST00000418628 OR12D3Q9UGF7 316 aa19.22■□□□□ 0.67
PTCD3-204ENST00000418628 INTUQ9ULD6 942 aa19.22■□□□□ 0.67
PTCD3-204ENST00000418628 MTA2O94776 668 aa19.21■□□□□ 0.67
PTCD3-204ENST00000418628 KLF8O95600 359 aaPredicted RBP19.21■□□□□ 0.67
PTCD3-204ENST00000418628 C7P10643 843 aa19.21■□□□□ 0.67
PTCD3-204ENST00000418628 PCK1P35558 622 aa19.21■□□□□ 0.67
PTCD3-204ENST00000418628 SLC12A1Q13621 1099 aa19.21■□□□□ 0.67
PTCD3-204ENST00000418628 TCEAL1Q15170 157 aa19.21■□□□□ 0.67
PTCD3-204ENST00000418628 CRY1Q16526 586 aa19.21■□□□□ 0.67
PTCD3-204ENST00000418628 PLEKHG6Q3KR16 790 aa19.21■□□□□ 0.67
PTCD3-204ENST00000418628 TSSK4Q6SA08 328 aa19.21■□□□□ 0.67
PTCD3-204ENST00000418628 TMEM92Q6UXU6 159 aa19.21■□□□□ 0.67
PTCD3-204ENST00000418628 SLFN11Q7Z7L1 901 aa19.21■□□□□ 0.67
PTCD3-204ENST00000418628 NLRP14Q86W24 1093 aa19.21■□□□□ 0.67
PTCD3-204ENST00000418628 CCDC170Q8IYT3 715 aa19.21■□□□□ 0.67
PTCD3-204ENST00000418628 ZBTB44Q8NCP5 570 aa19.21■□□□□ 0.67
PTCD3-204ENST00000418628 ZNF564Q8TBZ8 553 aaPredicted RBP19.21■□□□□ 0.67
PTCD3-204ENST00000418628 CTNNBL1Q8WYA6 563 aaPredicted RBP19.21■□□□□ 0.67
PTCD3-204ENST00000418628 MYO19Q96H55 970 aa19.21■□□□□ 0.67
PTCD3-204ENST00000418628 RETREG1Q9H6L5 497 aa19.21■□□□□ 0.67
PTCD3-204ENST00000418628 KIAA1522Q9P206 1035 aaPredicted RBP19.21■□□□□ 0.67
PTCD3-204ENST00000418628 ANAPC7Q9UJX3 599 aa19.21■□□□□ 0.67
PTCD3-204ENST00000418628 OR51B4Q9Y5P0 310 aa19.21■□□□□ 0.67
PTCD3-204ENST00000418628 CCDC163A0A0D9SF12 145 aa19.2■□□□□ 0.66
PTCD3-204ENST00000418628 A0A1W2PQF6 199 aa19.2■□□□□ 0.66
PTCD3-204ENST00000418628 H0Y858 1186 aa19.2■□□□□ 0.66
PTCD3-204ENST00000418628 TIMM44O43615 452 aa19.2■□□□□ 0.66
PTCD3-204ENST00000418628 LILRB5O75023 590 aa19.2■□□□□ 0.66
PTCD3-204ENST00000418628 LRIG2O94898 1065 aa19.2■□□□□ 0.66
PTCD3-204ENST00000418628 MIPP30301 263 aa19.2■□□□□ 0.66
PTCD3-204ENST00000418628 NTSR1P30989 418 aa19.2■□□□□ 0.66
PTCD3-204ENST00000418628 L1CAMP32004 1257 aa19.2■□□□□ 0.66
PTCD3-204ENST00000418628 PI4KAP42356 2102 aa19.2■□□□□ 0.66
PTCD3-204ENST00000418628 IL12RB1P42701 662 aa19.2■□□□□ 0.66
PTCD3-204ENST00000418628 CSTF1Q05048 431 aaKnown RBP19.2■□□□□ 0.66
PTCD3-204ENST00000418628 PIGHQ14442 188 aaPredicted RBP19.2■□□□□ 0.66
PTCD3-204ENST00000418628 PITRM1Q5JRX3 1037 aa19.2■□□□□ 0.66
PTCD3-204ENST00000418628 EOGTQ5NDL2 527 aa19.2■□□□□ 0.66
PTCD3-204ENST00000418628 MBLAC2Q68D91 279 aa19.2■□□□□ 0.66
PTCD3-204ENST00000418628 RASSF3Q86WH2 238 aa19.2■□□□□ 0.66
PTCD3-204ENST00000418628 CCDC33Q8N5R6 958 aa19.2■□□□□ 0.66
PTCD3-204ENST00000418628 CAMKK1Q8N5S9 505 aa19.2■□□□□ 0.66
PTCD3-204ENST00000418628 NCAPGQ9BPX3 1015 aa19.2■□□□□ 0.66
PTCD3-204ENST00000418628 SNRNP25Q9BV90 132 aaKnown RBP19.2■□□□□ 0.66
PTCD3-204ENST00000418628 IRF2BPLQ9H1B7 796 aa19.2■□□□□ 0.66
PTCD3-204ENST00000418628 MPP6Q9NZW5 540 aa19.2■□□□□ 0.66
PTCD3-204ENST00000418628 FAM186AA6NE01 2351 aa19.19■□□□□ 0.66
PTCD3-204ENST00000418628 GPR179Q6PRD1 2367 aa19.19■□□□□ 0.66
PTCD3-204ENST00000418628 SDK1Q7Z5N4 2213 aa19.19■□□□□ 0.66
PTCD3-204ENST00000418628 EIF3CLB5ME19 914 aaKnown RBP19.19■□□□□ 0.66
PTCD3-204ENST00000418628 H0Y626 953 aa19.19■□□□□ 0.66
PTCD3-204ENST00000418628 DLDP09622 509 aaKnown RBP19.19■□□□□ 0.66
PTCD3-204ENST00000418628 TCF4P15884 667 aa19.19■□□□□ 0.66
PTCD3-204ENST00000418628 DESP17661 470 aa19.19■□□□□ 0.66
PTCD3-204ENST00000418628 CSKP41240 450 aa19.19■□□□□ 0.66
PTCD3-204ENST00000418628 OXCT1P55809 520 aa19.19■□□□□ 0.66
PTCD3-204ENST00000418628 SLC25A11Q02978 314 aaKnown RBP19.19■□□□□ 0.66
PTCD3-204ENST00000418628 DMWDQ09019 674 aa19.19■□□□□ 0.66
PTCD3-204ENST00000418628 ZNF234Q14588 700 aa19.19■□□□□ 0.66
PTCD3-204ENST00000418628 EFHC2Q5JST6 749 aa19.19■□□□□ 0.66
PTCD3-204ENST00000418628 DAB2IPQ5VWQ8 1189 aa19.19■□□□□ 0.66
PTCD3-204ENST00000418628 LRRC31Q6UY01 552 aa19.19■□□□□ 0.66
PTCD3-204ENST00000418628 SETD3Q86TU7 594 aaPredicted RBP19.19■□□□□ 0.66
PTCD3-204ENST00000418628 TMTC1Q8IUR5 882 aa19.19■□□□□ 0.66
PTCD3-204ENST00000418628 PSTKQ8IV42 348 aaKnown RBP19.19■□□□□ 0.66
PTCD3-204ENST00000418628 PYROXD2Q8N2H3 581 aa19.19■□□□□ 0.66
PTCD3-204ENST00000418628 UCMAQ8WVF2 138 aa19.19■□□□□ 0.66
PTCD3-204ENST00000418628 SORCS1Q8WY21 1168 aa19.19■□□□□ 0.66
PTCD3-204ENST00000418628 BTBD6Q96KE9 485 aa19.19■□□□□ 0.66
PTCD3-204ENST00000418628 MRGPRX3Q96LB0 322 aa19.19■□□□□ 0.66
PTCD3-204ENST00000418628 EIF3CQ99613 913 aaKnown RBP19.19■□□□□ 0.66
PTCD3-204ENST00000418628 ZYG11BQ9C0D3 744 aa19.19■□□□□ 0.66
PTCD3-204ENST00000418628 TMEM245Q9H330 911 aa19.19■□□□□ 0.66
PTCD3-204ENST00000418628 EBF1Q9UH73 591 aa19.19■□□□□ 0.66
PTCD3-204ENST00000418628 IP6K2Q9UHH9 426 aa19.19■□□□□ 0.66
PTCD3-204ENST00000418628 TP53BP1Q12888 1972 aaPredicted RBP19.19■□□□□ 0.66
PTCD3-204ENST00000418628 PIEZO1Q92508 2521 aa19.18■□□□□ 0.66
PTCD3-204ENST00000418628 SOWAHDA6NJG2 315 aa19.18■□□□□ 0.66
PTCD3-204ENST00000418628 RNF8O76064 485 aa19.18■□□□□ 0.66
PTCD3-204ENST00000418628 ASLP04424 464 aa19.18■□□□□ 0.66
PTCD3-204ENST00000418628 IL1R2P27930 398 aa19.18■□□□□ 0.66
PTCD3-204ENST00000418628 MZF1P28698 734 aaPredicted RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms