RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 SERPINA13PQ6UXR4 307 aa21.27■■□□□ 1
PKNOX1-202ENST00000418336 ZNF571Q7Z3V5 609 aaPredicted RBP21.27■■□□□ 1
PKNOX1-202ENST00000418336 C3orf20Q8ND61 904 aa21.27■■□□□ 1
PKNOX1-202ENST00000418336 RXFP2Q8WXD0 754 aa21.27■■□□□ 1
PKNOX1-202ENST00000418336 RNF34Q969K3 372 aa21.27■■□□□ 1
PKNOX1-202ENST00000418336 C1orf74Q96LT6 269 aa21.27■■□□□ 1
PKNOX1-202ENST00000418336 PRSS16Q9NQE7 514 aa21.27■■□□□ 1
PKNOX1-202ENST00000418336 ITM2CQ9NQX7 267 aa21.27■■□□□ 1
PKNOX1-202ENST00000418336 ADAM22Q9P0K1 906 aa21.27■■□□□ 1
PKNOX1-202ENST00000418336 TBC1D30Q9Y2I9 924 aa21.27■■□□□ 1
PKNOX1-202ENST00000418336 CEP192Q8TEP8 1941 aa21.27■■□□□ 1
PKNOX1-202ENST00000418336 ITIH6Q6UXX5 1313 aa21.27■□□□□ 0.99
PKNOX1-202ENST00000418336 NYNRINQ9P2P1 1898 aaKnown RBP21.26■□□□□ 0.99
PKNOX1-202ENST00000418336 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.26■□□□□ 0.99
PKNOX1-202ENST00000418336 GDF9O60383 454 aa21.26■□□□□ 0.99
PKNOX1-202ENST00000418336 CAVIN2O95810 425 aa21.26■□□□□ 0.99
PKNOX1-202ENST00000418336 POLR2EP19388 210 aaKnown RBP21.26■□□□□ 0.99
PKNOX1-202ENST00000418336 RDXP35241 583 aaKnown RBP21.26■□□□□ 0.99
PKNOX1-202ENST00000418336 RFC1P35251 1148 aaPredicted RBP21.26■□□□□ 0.99
PKNOX1-202ENST00000418336 PTPN9P43378 593 aa21.26■□□□□ 0.99
PKNOX1-202ENST00000418336 NSFP46459 744 aaKnown RBP21.26■□□□□ 0.99
PKNOX1-202ENST00000418336 C1QBPQ07021 282 aaKnown RBP21.26■□□□□ 0.99
PKNOX1-202ENST00000418336 ELF2Q15723 593 aa21.26■□□□□ 0.99
PKNOX1-202ENST00000418336 SKOR2Q2VWA4 1001 aaPredicted RBP21.26■□□□□ 0.99
PKNOX1-202ENST00000418336 FILIP1LQ4L180 1135 aa21.26■□□□□ 0.99
PKNOX1-202ENST00000418336 RABGAP1LQ5R372 815 aa21.26■□□□□ 0.99
PKNOX1-202ENST00000418336 ACAD10Q6JQN1 1059 aa21.26■□□□□ 0.99
PKNOX1-202ENST00000418336 SLC41A1Q8IVJ1 513 aa21.26■□□□□ 0.99
PKNOX1-202ENST00000418336 TMEFF1Q8IYR6 380 aa21.26■□□□□ 0.99
PKNOX1-202ENST00000418336 PGBD3Q8N328 593 aa21.26■□□□□ 0.99
PKNOX1-202ENST00000418336 KDM1BQ8NB78 822 aa21.26■□□□□ 0.99
PKNOX1-202ENST00000418336 RPRD1AQ96P16 312 aaPredicted RBP21.26■□□□□ 0.99
PKNOX1-202ENST00000418336 EDEM3Q9BZQ6 932 aa21.26■□□□□ 0.99
PKNOX1-202ENST00000418336 PRDM16Q9HAZ2 1276 aa21.26■□□□□ 0.99
PKNOX1-202ENST00000418336 KIAA1522Q9P206 1035 aaPredicted RBP21.26■□□□□ 0.99
PKNOX1-202ENST00000418336 TYW5A2RUC4 315 aaKnown RBP21.25■□□□□ 0.99
PKNOX1-202ENST00000418336 H0Y626 953 aa21.25■□□□□ 0.99
PKNOX1-202ENST00000418336 ZNF217O75362 1048 aa21.25■□□□□ 0.99
PKNOX1-202ENST00000418336 SERPINC1P01008 464 aa21.25■□□□□ 0.99
PKNOX1-202ENST00000418336 ASLP04424 464 aa21.25■□□□□ 0.99
PKNOX1-202ENST00000418336 HDAC4P56524 1084 aa21.25■□□□□ 0.99
PKNOX1-202ENST00000418336 STARD3Q14849 445 aa21.25■□□□□ 0.99
PKNOX1-202ENST00000418336 FNDC3BQ53EP0 1204 aaKnown RBP21.25■□□□□ 0.99
PKNOX1-202ENST00000418336 SPDYCQ5MJ68 293 aa21.25■□□□□ 0.99
PKNOX1-202ENST00000418336 MANEALQ5VSG8 457 aa21.25■□□□□ 0.99
PKNOX1-202ENST00000418336 TCEAL6Q6IPX3 200 aa21.25■□□□□ 0.99
PKNOX1-202ENST00000418336 WDR59Q6PJI9 974 aa21.25■□□□□ 0.99
PKNOX1-202ENST00000418336 FAM131BQ86XD5 332 aa21.25■□□□□ 0.99
PKNOX1-202ENST00000418336 TMPRSS6Q8IU80 811 aa21.25■□□□□ 0.99
PKNOX1-202ENST00000418336 MCOLN2Q8IZK6 566 aa21.25■□□□□ 0.99
PKNOX1-202ENST00000418336 OR2T3Q8NH03 318 aa21.25■□□□□ 0.99
PKNOX1-202ENST00000418336 TCEAL3Q969E4 200 aa21.25■□□□□ 0.99
PKNOX1-202ENST00000418336 SPACA7Q96KW9 195 aa21.25■□□□□ 0.99
PKNOX1-202ENST00000418336 MAGEB5Q9BZ81 275 aa21.25■□□□□ 0.99
PKNOX1-202ENST00000418336 HAUS4Q9H6D7 363 aa21.25■□□□□ 0.99
PKNOX1-202ENST00000418336 TMEM74BQ9NUR3 256 aa21.25■□□□□ 0.99
PKNOX1-202ENST00000418336 TMEM51Q9NW97 253 aa21.25■□□□□ 0.99
PKNOX1-202ENST00000418336 USP18Q9UMW8 372 aa21.25■□□□□ 0.99
PKNOX1-202ENST00000418336 CYP8B1Q9UNU6 501 aa21.25■□□□□ 0.99
PKNOX1-202ENST00000418336 ERVW-1Q9UQF0 538 aa21.25■□□□□ 0.99
PKNOX1-202ENST00000418336 SIGLEC16A6NMB1 481 aa21.24■□□□□ 0.99
PKNOX1-202ENST00000418336 C10orf142B7Z368 130 aa21.24■□□□□ 0.99
PKNOX1-202ENST00000418336 DDX3XO00571 662 aaKnown RBP eCLIP21.24■□□□□ 0.998e-6■■■□□ 16
PKNOX1-202ENST00000418336 CALB1P05937 261 aa21.24■□□□□ 0.99
PKNOX1-202ENST00000418336 ATP5BP06576 529 aaKnown RBP21.24■□□□□ 0.99
PKNOX1-202ENST00000418336 PDGFRAP16234 1089 aa21.24■□□□□ 0.99
PKNOX1-202ENST00000418336 ATP11AP98196 1134 aa21.24■□□□□ 0.99
PKNOX1-202ENST00000418336 SLC12A1Q13621 1099 aa21.24■□□□□ 0.99
PKNOX1-202ENST00000418336 E2F5Q15329 346 aa21.24■□□□□ 0.99
PKNOX1-202ENST00000418336 C9orf64Q5T6V5 341 aa21.24■□□□□ 0.99
PKNOX1-202ENST00000418336 HGSNATQ68CP4 663 aa21.24■□□□□ 0.99
PKNOX1-202ENST00000418336 DNAAF5Q86Y56 855 aa21.24■□□□□ 0.99
PKNOX1-202ENST00000418336 HAPLN3Q96S86 360 aa21.24■□□□□ 0.99
PKNOX1-202ENST00000418336 PSMB7Q99436 277 aa21.24■□□□□ 0.99
PKNOX1-202ENST00000418336 FEM1AQ9BSK4 669 aa21.24■□□□□ 0.99
PKNOX1-202ENST00000418336 SIK2Q9H0K1 926 aa21.24■□□□□ 0.99
PKNOX1-202ENST00000418336 WSB2Q9NYS7 404 aaPredicted RBP21.24■□□□□ 0.99
PKNOX1-202ENST00000418336 SLCO3A1Q9UIG8 710 aa21.24■□□□□ 0.99
PKNOX1-202ENST00000418336 PLA2G4CQ9UP65 541 aa21.24■□□□□ 0.99
PKNOX1-202ENST00000418336 GON4LQ3T8J9 2241 aa21.24■□□□□ 0.99
PKNOX1-202ENST00000418336 A0A1W2PQJ5 194 aa21.23■□□□□ 0.99
PKNOX1-202ENST00000418336 TTC34A8MYJ7 566 aa21.23■□□□□ 0.99
PKNOX1-202ENST00000418336 SRPRAP08240 638 aaKnown RBP21.23■□□□□ 0.99
PKNOX1-202ENST00000418336 KRT3P12035 628 aa21.23■□□□□ 0.99
PKNOX1-202ENST00000418336 RRM1P23921 792 aa21.23■□□□□ 0.99
PKNOX1-202ENST00000418336 ID4P47928 161 aa21.23■□□□□ 0.99
PKNOX1-202ENST00000418336 NUMBP49757 651 aa21.23■□□□□ 0.99
PKNOX1-202ENST00000418336 STK19P49842 368 aaPredicted RBP21.23■□□□□ 0.99
PKNOX1-202ENST00000418336 VASPP50552 380 aaPredicted RBP21.23■□□□□ 0.99
PKNOX1-202ENST00000418336 TPMTP51580 245 aa21.23■□□□□ 0.99
PKNOX1-202ENST00000418336 CDH4P55283 916 aa21.23■□□□□ 0.99
PKNOX1-202ENST00000418336 RPL7AP62424 266 aaKnown RBP21.23■□□□□ 0.99
PKNOX1-202ENST00000418336 OGDHQ02218 1023 aa21.23■□□□□ 0.99
PKNOX1-202ENST00000418336 CREB5Q02930 508 aa21.23■□□□□ 0.99
PKNOX1-202ENST00000418336 LMNB2Q03252 620 aa21.23■□□□□ 0.99
PKNOX1-202ENST00000418336 BYSLQ13895 437 aaKnown RBP21.23■□□□□ 0.99
PKNOX1-202ENST00000418336 RSPO4Q2I0M5 234 aaPredicted RBP21.23■□□□□ 0.99
PKNOX1-202ENST00000418336 HNRNPA1L2Q32P51 320 aaKnown RBP21.23■□□□□ 0.99
PKNOX1-202ENST00000418336 KIAA1324Q6UXG2 1013 aaKnown RBP21.23■□□□□ 0.99
PKNOX1-202ENST00000418336 STRADAQ7RTN6 431 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms