RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 GIT2Q14161 759 aa6.38□□□□□ -1.39
NIFKP3-201ENST00000417799 PABPC1LQ4VXU2 614 aaKnown RBP6.38□□□□□ -1.39
NIFKP3-201ENST00000417799 ZNF484Q5JVG2 852 aa6.38□□□□□ -1.39
NIFKP3-201ENST00000417799 ANKS6Q68DC2 871 aa6.38□□□□□ -1.39
NIFKP3-201ENST00000417799 SASS6Q6UVJ0 657 aa6.38□□□□□ -1.39
NIFKP3-201ENST00000417799 UNC13DQ70J99 1090 aa6.38□□□□□ -1.39
NIFKP3-201ENST00000417799 XYLT1Q86Y38 959 aa6.38□□□□□ -1.39
NIFKP3-201ENST00000417799 EXOC8Q8IYI6 725 aa6.38□□□□□ -1.39
NIFKP3-201ENST00000417799 PCSK9Q8NBP7 692 aaKnown RBP6.38□□□□□ -1.39
NIFKP3-201ENST00000417799 SVIPQ8NHG7 77 aa6.38□□□□□ -1.39
NIFKP3-201ENST00000417799 LRTOMTQ8WZ04 291 aa6.38□□□□□ -1.39
NIFKP3-201ENST00000417799 CCDC47Q96A33 483 aaKnown RBP6.38□□□□□ -1.39
NIFKP3-201ENST00000417799 GSDMAQ96QA5 445 aa6.38□□□□□ -1.39
NIFKP3-201ENST00000417799 SH2D3AQ9BRG2 576 aa6.38□□□□□ -1.39
NIFKP3-201ENST00000417799 REEP2Q9BRK0 252 aa6.38□□□□□ -1.39
NIFKP3-201ENST00000417799 MTG1Q9BT17 334 aaPredicted RBP6.38□□□□□ -1.39
NIFKP3-201ENST00000417799 TIPINQ9BVW5 301 aa6.38□□□□□ -1.39
NIFKP3-201ENST00000417799 KATNAL1Q9BW62 490 aa6.38□□□□□ -1.39
NIFKP3-201ENST00000417799 ZNF700Q9H0M5 742 aa6.38□□□□□ -1.39
NIFKP3-201ENST00000417799 XYLT2Q9H1B5 865 aa6.38□□□□□ -1.39
NIFKP3-201ENST00000417799 DHX33Q9H6R0 707 aaKnown RBP6.38□□□□□ -1.39
NIFKP3-201ENST00000417799 ZMAT3Q9HA38 289 aaKnown RBP6.38□□□□□ -1.39
NIFKP3-201ENST00000417799 SARS2Q9NP81 518 aaKnown RBP6.38□□□□□ -1.39
NIFKP3-201ENST00000417799 MAN1B1Q9UKM7 699 aa6.38□□□□□ -1.39
NIFKP3-201ENST00000417799 PCDHGB6Q9Y5F9 930 aa6.38□□□□□ -1.39
NIFKP3-201ENST00000417799 COL1A2P08123 1366 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 IGKV6-21A0A0C4DH24 114 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 TCRBV7S2A1N4TA0A589 114 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 FRMD3A2A2Y4 597 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 RRN3P2A6NIE6 340 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 TBKBP1A7MCY6 615 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 KIAA0391O15091 583 aaKnown RBP6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 PHGDHO43175 533 aaKnown RBP6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 MGEA5O60502 916 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 USO1O60763 962 aaKnown RBP6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 PQBP1O60828 265 aaKnown RBP6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 TBCAO75347 108 aaKnown RBP6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 CABYRO75952 493 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 RHOBTB3O94955 611 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 PLATP00750 562 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 ASGR1P07306 291 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 INHBBP09529 407 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 SBK3P0C264 359 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 SMIM10L2AP0DMW4 78 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 SMIM10L2BP0DMW5 78 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 CCDC192P0DO97 292 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 MTHFD1P11586 935 aaKnown RBP6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 IDEP14735 1019 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 GAP43P17677 238 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 PEX2P28328 305 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 NEK3P51956 506 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 POLGP54098 1239 aaPredicted RBP6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 COASYQ13057 564 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 PPFIA1Q13136 1202 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 MORC3Q14149 939 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 KCNB1Q14721 858 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 EMC2Q15006 297 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 BMT2Q1RMZ1 405 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 HERC4Q5GLZ8 1057 aaPredicted RBP6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 UBXN11Q5T124 520 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 ZFYVE27Q5T4F4 411 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 ZNF529Q6P280 563 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 CXCL17Q6UXB2 119 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 DOK3Q7L591 496 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 APBB1IPQ7Z5R6 666 aaPredicted RBP6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 C11orf96Q7Z7L8 435 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 FAM90A1Q86YD7 464 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 CCDC65Q8IXS2 484 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 TRIML1Q8N9V2 468 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 MCPH1Q8NEM0 835 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 IL17RDQ8NFM7 739 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 BRIX1Q8TDN6 353 aaKnown RBP6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 TRAPPC12Q8WVT3 735 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 ZNF333Q96JL9 665 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 DEFB118Q96PH6 123 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 CPPED1Q9BRF8 314 aaPredicted RBP6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 LSM14BQ9BX40 385 aaKnown RBP6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 MRPL46Q9H2W6 279 aaKnown RBP6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 ATP6V0A4Q9HBG4 840 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 POLD4Q9HCU8 107 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 XPNPEP1Q9NQW7 623 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 EXOC1Q9NV70 894 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 PANK4Q9NVE7 773 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 RMND1Q9NWS8 449 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 SIDT1Q9NXL6 827 aaKnown RBP6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 ODF2LQ9ULJ1 636 aa6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 MYH9P35579 1960 aaKnown RBP6.37□□□□□ -1.39
NIFKP3-201ENST00000417799 NRCAMQ92823 1304 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 A0A1W2PPL8 197 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 PRR5-ARHGAP8B1AHC4 643 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 RSPH10B2B2RC85 870 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 KBTBD13C9JR72 458 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 MAGEB2O15479 319 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 MFAP3LO75121 409 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 SGPL1O95470 568 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 C22orf31O95567 290 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 RSPH10BP0C881 870 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 KLRC1P26715 233 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 MSX2P35548 267 aaPredicted RBP6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 ARL2P36404 184 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms