RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 FAM133BQ5BKY9 247 aaKnown RBP17.45■□□□□ 0.38
CALD1-204ENST00000417172 NUGGCQ68CJ6 796 aa17.45■□□□□ 0.38
CALD1-204ENST00000417172 KLHDC10Q6PID8 442 aa17.45■□□□□ 0.38
CALD1-204ENST00000417172 BZW1Q7L1Q6 419 aaKnown RBP17.45■□□□□ 0.38
CALD1-204ENST00000417172 ADGRD2Q7Z7M1 963 aa17.45■□□□□ 0.38
CALD1-204ENST00000417172 TADA2BQ86TJ2 420 aa17.45■□□□□ 0.38
CALD1-204ENST00000417172 NLRP14Q86W24 1093 aa17.45■□□□□ 0.38
CALD1-204ENST00000417172 IQCKQ8N0W5 287 aa17.45■□□□□ 0.38
CALD1-204ENST00000417172 CFAP52Q8N1V2 620 aa17.45■□□□□ 0.38
CALD1-204ENST00000417172 RTL3Q8N8U3 475 aaKnown RBP17.45■□□□□ 0.38
CALD1-204ENST00000417172 NAT8LQ8N9F0 302 aa17.45■□□□□ 0.38
CALD1-204ENST00000417172 BBOF1Q8ND07 529 aa17.45■□□□□ 0.38
CALD1-204ENST00000417172 UHMK1Q8TAS1 419 aaKnown RBP17.45■□□□□ 0.38
CALD1-204ENST00000417172 KLF16Q9BXK1 252 aaPredicted RBP17.45■□□□□ 0.38
CALD1-204ENST00000417172 PBX4Q9BYU1 374 aa17.45■□□□□ 0.38
CALD1-204ENST00000417172 SLC39A8Q9C0K1 460 aa17.45■□□□□ 0.38
CALD1-204ENST00000417172 NOL6Q9H6R4 1146 aaKnown RBP17.45■□□□□ 0.38
CALD1-204ENST00000417172 CATSPERBQ9H7T0 1116 aa17.45■□□□□ 0.38
CALD1-204ENST00000417172 PLAAQ9Y263 795 aa17.45■□□□□ 0.38
CALD1-204ENST00000417172 A0A1W2PRU2 124 aa17.44■□□□□ 0.38
CALD1-204ENST00000417172 FGF10O15520 208 aaPredicted RBP17.44■□□□□ 0.38
CALD1-204ENST00000417172 CLASP2O75122 1294 aaKnown RBP17.44■□□□□ 0.38
CALD1-204ENST00000417172 MBL2P11226 248 aaPredicted RBP17.44■□□□□ 0.38
CALD1-204ENST00000417172 MYL4P12829 197 aa17.44■□□□□ 0.38
CALD1-204ENST00000417172 CORO1AP31146 461 aaKnown RBP17.44■□□□□ 0.38
CALD1-204ENST00000417172 SERPINB6P35237 376 aa17.44■□□□□ 0.38
CALD1-204ENST00000417172 CCR2P41597 374 aa17.44■□□□□ 0.38
CALD1-204ENST00000417172 CAV1Q03135 178 aa17.44■□□□□ 0.38
CALD1-204ENST00000417172 FASTKD3Q14CZ7 662 aaKnown RBP17.44■□□□□ 0.38
CALD1-204ENST00000417172 MORF4L2Q15014 288 aa17.44■□□□□ 0.38
CALD1-204ENST00000417172 PPM1LQ5SGD2 360 aa17.44■□□□□ 0.38
CALD1-204ENST00000417172 ANKRD20A2Q5SQ80 823 aa17.44■□□□□ 0.38
CALD1-204ENST00000417172 CFAP58Q5T655 872 aa17.44■□□□□ 0.38
CALD1-204ENST00000417172 ZNF697Q5TEC3 545 aa17.44■□□□□ 0.38
CALD1-204ENST00000417172 ANKRD20A1Q5TYW2 823 aa17.44■□□□□ 0.38
CALD1-204ENST00000417172 ANKRD20A3Q5VUR7 823 aa17.44■□□□□ 0.38
CALD1-204ENST00000417172 PPIL6Q8IXY8 311 aa17.44■□□□□ 0.38
CALD1-204ENST00000417172 ZCCHC9Q8N567 271 aaKnown RBP17.44■□□□□ 0.38
CALD1-204ENST00000417172 RPRD1AQ96P16 312 aaPredicted RBP17.44■□□□□ 0.38
CALD1-204ENST00000417172 FAM129AQ9BZQ8 928 aa17.44■□□□□ 0.38
CALD1-204ENST00000417172 CDC42EP4Q9H3Q1 356 aaKnown RBP17.44■□□□□ 0.38
CALD1-204ENST00000417172 ETNK1Q9HBU6 452 aa17.44■□□□□ 0.38
CALD1-204ENST00000417172 PAK5Q9P286 719 aa17.44■□□□□ 0.38
CALD1-204ENST00000417172 HELZP42694 1942 aaKnown RBP17.43■□□□□ 0.38
CALD1-204ENST00000417172 C5orf60A6NFR6 353 aa17.43■□□□□ 0.38
CALD1-204ENST00000417172 GCATO75600 419 aa17.43■□□□□ 0.38
CALD1-204ENST00000417172 RB1P06400 928 aa17.43■□□□□ 0.38
CALD1-204ENST00000417172 TACR2P21452 398 aa17.43■□□□□ 0.38
CALD1-204ENST00000417172 ACTN2P35609 894 aa17.43■□□□□ 0.38
CALD1-204ENST00000417172 SGSHP51688 502 aa17.43■□□□□ 0.38
CALD1-204ENST00000417172 KPNA1P52294 538 aaPredicted RBP17.43■□□□□ 0.38
CALD1-204ENST00000417172 ERVK-21P61565 698 aa17.43■□□□□ 0.38
CALD1-204ENST00000417172 PPIDQ08752 370 aaKnown RBP17.43■□□□□ 0.38
CALD1-204ENST00000417172 ZBTB17Q13105 803 aa17.43■□□□□ 0.38
CALD1-204ENST00000417172 KCNJ11Q14654 390 aa17.43■□□□□ 0.38
CALD1-204ENST00000417172 PDZD4Q76G19 769 aaPredicted RBP17.43■□□□□ 0.38
CALD1-204ENST00000417172 LGI2Q8N0V4 545 aa17.43■□□□□ 0.38
CALD1-204ENST00000417172 MAB21L3Q8N8X9 362 aa17.43■□□□□ 0.38
CALD1-204ENST00000417172 ADAMTS19Q8TE59 1207 aa17.43■□□□□ 0.38
CALD1-204ENST00000417172 HDAC11Q96DB2 347 aa17.43■□□□□ 0.38
CALD1-204ENST00000417172 ZYG11BQ9C0D3 744 aa17.43■□□□□ 0.38
CALD1-204ENST00000417172 NKX2-4Q9H2Z4 354 aa17.43■□□□□ 0.38
CALD1-204ENST00000417172 SHOC2Q9UQ13 582 aa17.43■□□□□ 0.38
CALD1-204ENST00000417172 ASB3Q9Y575 518 aa17.43■□□□□ 0.38
CALD1-204ENST00000417172 PCDHA11Q9Y5I1 949 aa17.43■□□□□ 0.38
CALD1-204ENST00000417172 IGLV3-10A0A075B6K4 115 aa17.43■□□□□ 0.38
CALD1-204ENST00000417172 A0A0A0MRY4 1105 aa17.43■□□□□ 0.38
CALD1-204ENST00000417172 ACSL4O60488 711 aa17.43■□□□□ 0.38
CALD1-204ENST00000417172 SHBGP04278 402 aa17.43■□□□□ 0.38
CALD1-204ENST00000417172 HARS2P49590 506 aaKnown RBP17.43■□□□□ 0.38
CALD1-204ENST00000417172 MSS51Q4VC12 460 aa17.43■□□□□ 0.38
CALD1-204ENST00000417172 FNBP1LQ5T0N5 605 aa17.43■□□□□ 0.38
CALD1-204ENST00000417172 LRRC31Q6UY01 552 aa17.43■□□□□ 0.38
CALD1-204ENST00000417172 ZNF567Q8N184 647 aa17.43■□□□□ 0.38
CALD1-204ENST00000417172 TCEAL4Q96EI5 215 aa17.43■□□□□ 0.38
CALD1-204ENST00000417172 ZNF419Q96HQ0 510 aaPredicted RBP17.43■□□□□ 0.38
CALD1-204ENST00000417172 PRICKLE1Q96MT3 831 aaPredicted RBP17.43■□□□□ 0.38
CALD1-204ENST00000417172 SPATA13Q96N96 652 aa17.43■□□□□ 0.38
CALD1-204ENST00000417172 RBM15Q96T37 977 aaKnown RBP eCLIP17.43■□□□□ 0.38
CALD1-204ENST00000417172 ATXN3LQ9H3M9 355 aa17.43■□□□□ 0.38
CALD1-204ENST00000417172 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.42■□□□□ 0.38
CALD1-204ENST00000417172 EPOPA6NHQ4 379 aa17.42■□□□□ 0.38
CALD1-204ENST00000417172 H0YGN5 161 aa17.42■□□□□ 0.38
CALD1-204ENST00000417172 H3BNC9 293 aa17.42■□□□□ 0.38
CALD1-204ENST00000417172 LPXNO60711 386 aa17.42■□□□□ 0.38
CALD1-204ENST00000417172 SYF2O95926 243 aaKnown RBP17.42■□□□□ 0.38
CALD1-204ENST00000417172 PTPN3P26045 913 aa17.42■□□□□ 0.38
CALD1-204ENST00000417172 HTR7P34969 479 aa17.42■□□□□ 0.38
CALD1-204ENST00000417172 PPP3CCP48454 512 aa17.42■□□□□ 0.38
CALD1-204ENST00000417172 COG7P83436 770 aa17.42■□□□□ 0.38
CALD1-204ENST00000417172 ARHGEF18Q6ZSZ5 1173 aa17.42■□□□□ 0.38
CALD1-204ENST00000417172 GDPD5Q8WTR4 605 aa17.42■□□□□ 0.38
CALD1-204ENST00000417172 PLD4Q96BZ4 506 aa17.42■□□□□ 0.38
CALD1-204ENST00000417172 C9orf72Q96LT7 481 aa17.42■□□□□ 0.38
CALD1-204ENST00000417172 SMG9Q9H0W8 520 aaKnown RBP17.42■□□□□ 0.38
CALD1-204ENST00000417172 SAYSD1Q9NPB0 183 aa17.42■□□□□ 0.38
CALD1-204ENST00000417172 PPARGC1AQ9UBK2 798 aaKnown RBP17.42■□□□□ 0.38
CALD1-204ENST00000417172 ZNF212Q9UDV6 495 aa17.42■□□□□ 0.38
CALD1-204ENST00000417172 AGO1Q9UL18 857 aaKnown RBP17.42■□□□□ 0.38
CALD1-204ENST00000417172 CPQQ9Y646 472 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms