RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 EIF3CLB5ME19 914 aaKnown RBP23.78■■□□□ 1.4
SMARCB1-205ENST00000417137 LCA5LO95447 670 aa23.78■■□□□ 1.4
SMARCB1-205ENST00000417137 MIPP30301 263 aa23.78■■□□□ 1.4
SMARCB1-205ENST00000417137 NTSR1P30989 418 aa23.78■■□□□ 1.4
SMARCB1-205ENST00000417137 L1CAMP32004 1257 aa23.78■■□□□ 1.4
SMARCB1-205ENST00000417137 FSCBQ5H9T9 825 aa23.78■■□□□ 1.4
SMARCB1-205ENST00000417137 ERMARDQ5T6L9 678 aa23.78■■□□□ 1.4
SMARCB1-205ENST00000417137 EGFLAMQ63HQ2 1017 aa23.78■■□□□ 1.4
SMARCB1-205ENST00000417137 MBLAC2Q68D91 279 aa23.78■■□□□ 1.4
SMARCB1-205ENST00000417137 ADIPOR2Q86V24 386 aa23.78■■□□□ 1.4
SMARCB1-205ENST00000417137 PSTKQ8IV42 348 aaKnown RBP23.78■■□□□ 1.4
SMARCB1-205ENST00000417137 MAML2Q8IZL2 1156 aaPredicted RBP23.78■■□□□ 1.4
SMARCB1-205ENST00000417137 CAMKK1Q8N5S9 505 aa23.78■■□□□ 1.4
SMARCB1-205ENST00000417137 NIPA2Q8N8Q9 360 aa23.78■■□□□ 1.4
SMARCB1-205ENST00000417137 PRSS33Q8NF86 280 aa23.78■■□□□ 1.4
SMARCB1-205ENST00000417137 LMLNQ96KR4 655 aa23.78■■□□□ 1.4
SMARCB1-205ENST00000417137 EIF3CQ99613 913 aaKnown RBP23.78■■□□□ 1.4
SMARCB1-205ENST00000417137 THAP10Q9P2Z0 257 aaPredicted RBP23.78■■□□□ 1.4
SMARCB1-205ENST00000417137 PCSK1NQ9UHG2 260 aa23.78■■□□□ 1.4
SMARCB1-205ENST00000417137 TBC1D30Q9Y2I9 924 aa23.78■■□□□ 1.4
SMARCB1-205ENST00000417137 EPN1Q9Y6I3 576 aaPredicted RBP23.78■■□□□ 1.4
SMARCB1-205ENST00000417137 ZNF318Q5VUA4 2279 aa23.78■■□□□ 1.4
SMARCB1-205ENST00000417137 LRCH4O75427 683 aa23.77■■□□□ 1.4
SMARCB1-205ENST00000417137 DGKEP52429 567 aa23.77■■□□□ 1.4
SMARCB1-205ENST00000417137 BOLA3Q53S33 107 aa23.77■■□□□ 1.4
SMARCB1-205ENST00000417137 RWDD4Q6NW29 188 aaKnown RBP23.77■■□□□ 1.4
SMARCB1-205ENST00000417137 SETD3Q86TU7 594 aaPredicted RBP23.77■■□□□ 1.4
SMARCB1-205ENST00000417137 ARFGAP1Q8N6T3 406 aa23.77■■□□□ 1.4
SMARCB1-205ENST00000417137 TBC1D31Q96DN5 1066 aa23.77■■□□□ 1.4
SMARCB1-205ENST00000417137 EPAS1Q99814 870 aa23.77■■□□□ 1.4
SMARCB1-205ENST00000417137 MPP6Q9NZW5 540 aa23.77■■□□□ 1.4
SMARCB1-205ENST00000417137 USP18Q9UMW8 372 aa23.77■■□□□ 1.4
SMARCB1-205ENST00000417137 H0Y858 1186 aa23.76■■□□□ 1.39
SMARCB1-205ENST00000417137 CNTN5O94779 1100 aa23.76■■□□□ 1.39
SMARCB1-205ENST00000417137 ASLP04424 464 aa23.76■■□□□ 1.39
SMARCB1-205ENST00000417137 DLDP09622 509 aaKnown RBP23.76■■□□□ 1.39
SMARCB1-205ENST00000417137 SP9P0CG40 484 aa23.76■■□□□ 1.39
SMARCB1-205ENST00000417137 OR1E1P30953 314 aa23.76■■□□□ 1.39
SMARCB1-205ENST00000417137 HOXA6P31267 233 aa23.76■■□□□ 1.39
SMARCB1-205ENST00000417137 PLK1P53350 603 aa23.76■■□□□ 1.39
SMARCB1-205ENST00000417137 TCF15Q12870 199 aa23.76■■□□□ 1.39
SMARCB1-205ENST00000417137 CRY1Q16526 586 aa23.76■■□□□ 1.39
SMARCB1-205ENST00000417137 ALFQ53S48 1182 aa23.76■■□□□ 1.39
SMARCB1-205ENST00000417137 C6orf118Q5T5N4 469 aa23.76■■□□□ 1.39
SMARCB1-205ENST00000417137 TMEM215Q68D42 235 aa23.76■■□□□ 1.39
SMARCB1-205ENST00000417137 SLC35G2Q8TBE7 412 aa23.76■■□□□ 1.39
SMARCB1-205ENST00000417137 TTC17Q96AE7 1141 aa23.76■■□□□ 1.39
SMARCB1-205ENST00000417137 BTBD6Q96KE9 485 aa23.76■■□□□ 1.39
SMARCB1-205ENST00000417137 POLMQ9NP87 494 aaPredicted RBP23.76■■□□□ 1.39
SMARCB1-205ENST00000417137 PCDHA13Q9Y5I0 950 aa23.76■■□□□ 1.39
SMARCB1-205ENST00000417137 KIAA1549LQ6ZVL6 1849 aa23.75■■□□□ 1.39
SMARCB1-205ENST00000417137 ANTXRLA6NF34 631 aa23.75■■□□□ 1.39
SMARCB1-205ENST00000417137 SOWAHDA6NJG2 315 aa23.75■■□□□ 1.39
SMARCB1-205ENST00000417137 SGK1O00141 431 aa23.75■■□□□ 1.39
SMARCB1-205ENST00000417137 ZBTB24O43167 697 aaPredicted RBP23.75■■□□□ 1.39
SMARCB1-205ENST00000417137 LRIG2O94898 1065 aa23.75■■□□□ 1.39
SMARCB1-205ENST00000417137 NDUFA10O95299 355 aa23.75■■□□□ 1.39
SMARCB1-205ENST00000417137 RHOCP08134 193 aa23.75■■□□□ 1.39
SMARCB1-205ENST00000417137 CHRM1P11229 460 aaPredicted RBP23.75■■□□□ 1.39
SMARCB1-205ENST00000417137 RHOQP17081 205 aa23.75■■□□□ 1.39
SMARCB1-205ENST00000417137 HTR7P34969 479 aa23.75■■□□□ 1.39
SMARCB1-205ENST00000417137 IRAK1P51617 712 aa23.75■■□□□ 1.39
SMARCB1-205ENST00000417137 SULT2A1Q06520 285 aa23.75■■□□□ 1.39
SMARCB1-205ENST00000417137 HADHQ16836 314 aaKnown RBP23.75■■□□□ 1.39
SMARCB1-205ENST00000417137 PLEKHG6Q3KR16 790 aa23.75■■□□□ 1.39
SMARCB1-205ENST00000417137 FUT11Q495W5 492 aa23.75■■□□□ 1.39
SMARCB1-205ENST00000417137 PITRM1Q5JRX3 1037 aa23.75■■□□□ 1.39
SMARCB1-205ENST00000417137 MANEALQ5VSG8 457 aa23.75■■□□□ 1.39
SMARCB1-205ENST00000417137 CXorf57Q6NSI4 855 aaKnown RBP23.75■■□□□ 1.39
SMARCB1-205ENST00000417137 RFFLQ8WZ73 363 aa23.75■■□□□ 1.39
SMARCB1-205ENST00000417137 C2orf42Q9NWW7 574 aa23.75■■□□□ 1.39
SMARCB1-205ENST00000417137 HCN2Q9UL51 889 aa23.75■■□□□ 1.39
SMARCB1-205ENST00000417137 AP4E1Q9UPM8 1137 aa23.75■■□□□ 1.39
SMARCB1-205ENST00000417137 WDFY4Q6ZS81 3184 aa23.74■■□□□ 1.39
SMARCB1-205ENST00000417137 FAM72CH0Y354 149 aa23.74■■□□□ 1.39
SMARCB1-205ENST00000417137 K7ESF4 209 aa23.74■■□□□ 1.39
SMARCB1-205ENST00000417137 CREB3O43889 395 aa23.74■■□□□ 1.39
SMARCB1-205ENST00000417137 ALDH1A2O94788 518 aa23.74■■□□□ 1.39
SMARCB1-205ENST00000417137 PROSCO94903 275 aa23.74■■□□□ 1.39
SMARCB1-205ENST00000417137 CSKP41240 450 aa23.74■■□□□ 1.39
SMARCB1-205ENST00000417137 ARHGAP25P42331 645 aa23.74■■□□□ 1.39
SMARCB1-205ENST00000417137 ZNF135P52742 658 aaPredicted RBP23.74■■□□□ 1.39
SMARCB1-205ENST00000417137 ST8SIA6P61647 398 aa23.74■■□□□ 1.39
SMARCB1-205ENST00000417137 FAM72AQ5TYM5 149 aa23.74■■□□□ 1.39
SMARCB1-205ENST00000417137 RNF219Q5W0B1 726 aaPredicted RBP23.74■■□□□ 1.39
SMARCB1-205ENST00000417137 FAM72DQ6L9T8 149 aa23.74■■□□□ 1.39
SMARCB1-205ENST00000417137 TSSK4Q6SA08 328 aa23.74■■□□□ 1.39
SMARCB1-205ENST00000417137 ZNF783Q6ZMS7 281 aa23.74■■□□□ 1.39
SMARCB1-205ENST00000417137 TFAP2DQ7Z6R9 452 aa23.74■■□□□ 1.39
SMARCB1-205ENST00000417137 FAM72BQ86X60 149 aa23.74■■□□□ 1.39
SMARCB1-205ENST00000417137 PYROXD2Q8N2H3 581 aa23.74■■□□□ 1.39
SMARCB1-205ENST00000417137 TSTD1Q8NFU3 115 aa23.74■■□□□ 1.39
SMARCB1-205ENST00000417137 SORCS1Q8WY21 1168 aa23.74■■□□□ 1.39
SMARCB1-205ENST00000417137 ACOX2Q99424 681 aa23.74■■□□□ 1.39
SMARCB1-205ENST00000417137 GABRG3Q99928 467 aa23.74■■□□□ 1.39
SMARCB1-205ENST00000417137 FEM1AQ9BSK4 669 aa23.74■■□□□ 1.39
SMARCB1-205ENST00000417137 MUC3BQ9H195 1237 aa23.74■■□□□ 1.39
SMARCB1-205ENST00000417137 DHX35Q9H5Z1 703 aaKnown RBP23.74■■□□□ 1.39
SMARCB1-205ENST00000417137 ZDHHC4Q9NPG8 344 aa23.74■■□□□ 1.39
SMARCB1-205ENST00000417137 DONSONQ9NYP3 566 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms