RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 VILLO15195 856 aa15.33■□□□□ 0.04
RPS28-201ENST00000417088 PAPSS1O43252 624 aaPredicted RBP15.33■□□□□ 0.04
RPS28-201ENST00000417088 AFPP02771 609 aaKnown RBP15.33■□□□□ 0.04
RPS28-201ENST00000417088 SRPRAP08240 638 aaKnown RBP15.33■□□□□ 0.04
RPS28-201ENST00000417088 KRT5P13647 590 aa15.33■□□□□ 0.04
RPS28-201ENST00000417088 TACR2P21452 398 aa15.33■□□□□ 0.04
RPS28-201ENST00000417088 GRK6P43250 576 aa15.33■□□□□ 0.04
RPS28-201ENST00000417088 CCT8P50990 548 aa15.33■□□□□ 0.04
RPS28-201ENST00000417088 MARSP56192 900 aaKnown RBP15.33■□□□□ 0.04
RPS28-201ENST00000417088 STX17P56962 302 aa15.33■□□□□ 0.04
RPS28-201ENST00000417088 RACK1P63244 317 aaKnown RBP15.33■□□□□ 0.04
RPS28-201ENST00000417088 NUCB2P80303 420 aa15.33■□□□□ 0.04
RPS28-201ENST00000417088 ECT2LQ008S8 904 aa15.33■□□□□ 0.04
RPS28-201ENST00000417088 MORC3Q14149 939 aa15.33■□□□□ 0.04
RPS28-201ENST00000417088 MEA1Q16626 185 aa15.33■□□□□ 0.04
RPS28-201ENST00000417088 ZC3H12AQ5D1E8 599 aaKnown RBP15.33■□□□□ 0.04
RPS28-201ENST00000417088 RAP1GAP2Q684P5 730 aa15.33■□□□□ 0.04
RPS28-201ENST00000417088 NCEH1Q6PIU2 408 aa15.33■□□□□ 0.04
RPS28-201ENST00000417088 ADAT2Q7Z6V5 191 aaKnown RBP15.33■□□□□ 0.04
RPS28-201ENST00000417088 TMEM110Q86TL2 294 aa15.33■□□□□ 0.04
RPS28-201ENST00000417088 MMAAQ8IVH4 418 aaKnown RBP15.33■□□□□ 0.04
RPS28-201ENST00000417088 APCDD1Q8J025 514 aa15.33■□□□□ 0.04
RPS28-201ENST00000417088 LGI2Q8N0V4 545 aa15.33■□□□□ 0.04
RPS28-201ENST00000417088 MDM1Q8TC05 714 aa15.33■□□□□ 0.04
RPS28-201ENST00000417088 SLC6A18Q96N87 628 aa15.33■□□□□ 0.04
RPS28-201ENST00000417088 FAM129BQ96TA1 746 aa15.33■□□□□ 0.04
RPS28-201ENST00000417088 ADAMTS1Q9UHI8 967 aa15.33■□□□□ 0.04
RPS28-201ENST00000417088 CTNND2Q9UQB3 1225 aa15.33■□□□□ 0.04
RPS28-201ENST00000417088 GPSM3Q9Y4H4 160 aa15.33■□□□□ 0.04
RPS28-201ENST00000417088 ITIH6Q6UXX5 1313 aa15.33■□□□□ 0.04
RPS28-201ENST00000417088 TMEM131Q92545 1883 aa15.33■□□□□ 0.04
RPS28-201ENST00000417088 EDDM13A0A1B0GTR0 161 aa15.32■□□□□ 0.04
RPS28-201ENST00000417088 E5RJQ4 531 aa15.32■□□□□ 0.04
RPS28-201ENST00000417088 BIN1O00499 593 aa15.32■□□□□ 0.04
RPS28-201ENST00000417088 CAPN9O14815 690 aa15.32■□□□□ 0.04
RPS28-201ENST00000417088 TNFSF14O43557 240 aa15.32■□□□□ 0.04
RPS28-201ENST00000417088 RNASEH2AO75792 299 aaKnown RBP15.32■□□□□ 0.04
RPS28-201ENST00000417088 LETM1O95202 739 aaPredicted RBP15.32■□□□□ 0.04
RPS28-201ENST00000417088 MOCS3O95396 460 aa15.32■□□□□ 0.04
RPS28-201ENST00000417088 GNA14O95837 355 aa15.32■□□□□ 0.04
RPS28-201ENST00000417088 IGLV3-25P01717 112 aa15.32■□□□□ 0.04
RPS28-201ENST00000417088 APOEP02649 317 aa15.32■□□□□ 0.04
RPS28-201ENST00000417088 SLC8A1P32418 973 aa15.32■□□□□ 0.04
RPS28-201ENST00000417088 PITX1P78337 314 aaPredicted RBP15.32■□□□□ 0.04
RPS28-201ENST00000417088 IL9RQ01113 521 aa15.32■□□□□ 0.04
RPS28-201ENST00000417088 SFSWAPQ12872 951 aaKnown RBP15.32■□□□□ 0.04
RPS28-201ENST00000417088 EIF4EBP2Q13542 120 aaPredicted RBP15.32■□□□□ 0.04
RPS28-201ENST00000417088 CHSY1Q86X52 802 aa15.32■□□□□ 0.04
RPS28-201ENST00000417088 MARCH9Q86YJ5 346 aa15.32■□□□□ 0.04
RPS28-201ENST00000417088 OR2T34Q8NGX1 318 aa15.32■□□□□ 0.04
RPS28-201ENST00000417088 ZNF606Q8WXB4 792 aa15.32■□□□□ 0.04
RPS28-201ENST00000417088 PTPRN2Q92932 1015 aa15.32■□□□□ 0.04
RPS28-201ENST00000417088 BTN2A3PQ96KV6 586 aa15.32■□□□□ 0.04
RPS28-201ENST00000417088 RPL10LQ96L21 214 aaKnown RBP15.32■□□□□ 0.04
RPS28-201ENST00000417088 OMDQ99983 421 aa15.32■□□□□ 0.04
RPS28-201ENST00000417088 TRIM62Q9BVG3 475 aa15.32■□□□□ 0.04
RPS28-201ENST00000417088 SRRTQ9BXP5 876 aaKnown RBP15.32■□□□□ 0.04
RPS28-201ENST00000417088 ACE2Q9BYF1 805 aaPredicted RBP15.32■□□□□ 0.04
RPS28-201ENST00000417088 POPDC2Q9HBU9 364 aa15.32■□□□□ 0.04
RPS28-201ENST00000417088 UBE2TQ9NPD8 197 aaPredicted RBP15.32■□□□□ 0.04
RPS28-201ENST00000417088 TJP2Q9UDY2 1190 aa15.32■□□□□ 0.04
RPS28-201ENST00000417088 FZD4Q9ULV1 537 aa15.32■□□□□ 0.04
RPS28-201ENST00000417088 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.32■□□□□ 0.04
RPS28-201ENST00000417088 BAHCC1Q9P281 2608 aa15.32■□□□□ 0.04
RPS28-201ENST00000417088 ITPR1Q14643 2758 aa15.31■□□□□ 0.04
RPS28-201ENST00000417088 CELSR3Q9NYQ7 3312 aa15.31■□□□□ 0.04
RPS28-201ENST00000417088 FASNP49327 2511 aaKnown RBP15.31■□□□□ 0.04
RPS28-201ENST00000417088 A0A1B0GTQ1 180 aa15.31■□□□□ 0.04
RPS28-201ENST00000417088 LRRC72A6NJI9 287 aa15.31■□□□□ 0.04
RPS28-201ENST00000417088 MED7O43513 233 aa15.31■□□□□ 0.04
RPS28-201ENST00000417088 DFNA5O60443 496 aa15.31■□□□□ 0.04
RPS28-201ENST00000417088 TRUB2O95900 331 aaKnown RBP15.31■□□□□ 0.04
RPS28-201ENST00000417088 WNT1P04628 370 aa15.31■□□□□ 0.04
RPS28-201ENST00000417088 C21orf59P57076 290 aa15.31■□□□□ 0.04
RPS28-201ENST00000417088 YWHAZP63104 245 aaKnown RBP15.31■□□□□ 0.04
RPS28-201ENST00000417088 COL9A2Q14055 689 aaPredicted RBP15.31■□□□□ 0.04
RPS28-201ENST00000417088 KCNJ12Q14500 433 aa15.31■□□□□ 0.04
RPS28-201ENST00000417088 TAF5Q15542 800 aa15.31■□□□□ 0.04
RPS28-201ENST00000417088 PRAMEF14Q5SWL7 426 aa15.31■□□□□ 0.04
RPS28-201ENST00000417088 C19orf48Q6RUI8 117 aa15.31■□□□□ 0.04
RPS28-201ENST00000417088 STK40Q8N2I9 435 aa15.31■□□□□ 0.04
RPS28-201ENST00000417088 AADATQ8N5Z0 425 aa15.31■□□□□ 0.04
RPS28-201ENST00000417088 MED15Q96RN5 788 aa15.31■□□□□ 0.04
RPS28-201ENST00000417088 THAP9Q9H5L6 903 aa15.31■□□□□ 0.04
RPS28-201ENST00000417088 ACP6Q9NPH0 428 aa15.31■□□□□ 0.04
RPS28-201ENST00000417088 CEP83Q9Y592 693 aa15.31■□□□□ 0.04
RPS28-201ENST00000417088 KNTC1P50748 2209 aa15.31■□□□□ 0.04
RPS28-201ENST00000417088 A0A1W2PR77 199 aa15.3■□□□□ 0.04
RPS28-201ENST00000417088 KCNU1A8MYU2 1149 aa15.3■□□□□ 0.04
RPS28-201ENST00000417088 WNT9AO14904 365 aa15.3■□□□□ 0.04
RPS28-201ENST00000417088 THAP12O43422 761 aa15.3■□□□□ 0.04
RPS28-201ENST00000417088 GOT1P17174 413 aa15.3■□□□□ 0.04
RPS28-201ENST00000417088 GNA15P30679 374 aa15.3■□□□□ 0.04
RPS28-201ENST00000417088 PSMD8P48556 350 aa15.3■□□□□ 0.04
RPS28-201ENST00000417088 STK19P49842 368 aaPredicted RBP15.3■□□□□ 0.04
RPS28-201ENST00000417088 CCR5P51681 352 aa15.3■□□□□ 0.04
RPS28-201ENST00000417088 PAK1Q13153 545 aa15.3■□□□□ 0.04
RPS28-201ENST00000417088 CAMK2BQ13554 666 aa15.3■□□□□ 0.04
RPS28-201ENST00000417088 RNF219Q5W0B1 726 aaPredicted RBP15.3■□□□□ 0.04
RPS28-201ENST00000417088 GJB7Q6PEY0 223 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms