RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 BRMS1LQ5PSV4 323 aa11.9□□□□□ -0.5
RFFL-205ENST00000415395 BTBD8Q5XKL5 378 aa11.9□□□□□ -0.5
RFFL-205ENST00000415395 RNF19BQ6ZMZ0 732 aa11.9□□□□□ -0.5
RFFL-205ENST00000415395 DENND5BQ6ZUT9 1274 aa11.9□□□□□ -0.5
RFFL-205ENST00000415395 FAM131BQ86XD5 332 aa11.9□□□□□ -0.5
RFFL-205ENST00000415395 TRIM42Q8IWZ5 723 aa11.9□□□□□ -0.5
RFFL-205ENST00000415395 CCDC185Q8N715 623 aa11.9□□□□□ -0.5
RFFL-205ENST00000415395 ENDOVQ8N8Q3 282 aaKnown RBP11.9□□□□□ -0.5
RFFL-205ENST00000415395 ATAD1Q8NBU5 361 aa11.9□□□□□ -0.5
RFFL-205ENST00000415395 ACTL9Q8TC94 416 aa11.9□□□□□ -0.5
RFFL-205ENST00000415395 C10orf82Q8WW14 230 aa11.9□□□□□ -0.5
RFFL-205ENST00000415395 PRCCQ92733 491 aaPredicted RBP11.9□□□□□ -0.5
RFFL-205ENST00000415395 B3GALT6Q96L58 329 aa11.9□□□□□ -0.5
RFFL-205ENST00000415395 VN1R3Q9BXE9 311 aa11.9□□□□□ -0.5
RFFL-205ENST00000415395 VPS11Q9H270 941 aa11.9□□□□□ -0.5
RFFL-205ENST00000415395 SMOC2Q9H3U7 446 aa11.9□□□□□ -0.5
RFFL-205ENST00000415395 PIGVQ9NUD9 493 aa11.9□□□□□ -0.5
RFFL-205ENST00000415395 DDIT4Q9NX09 232 aa11.9□□□□□ -0.5
RFFL-205ENST00000415395 MTMR10Q9NXD2 777 aa11.9□□□□□ -0.5
RFFL-205ENST00000415395 FBXW11Q9UKB1 542 aa11.9□□□□□ -0.5
RFFL-205ENST00000415395 CORO1CQ9ULV4 474 aaPredicted RBP11.9□□□□□ -0.5
RFFL-205ENST00000415395 MAFFQ9ULX9 164 aa11.9□□□□□ -0.5
RFFL-205ENST00000415395 CHKBQ9Y259 395 aa11.9□□□□□ -0.5
RFFL-205ENST00000415395 CDY1Q9Y6F8 540 aa11.9□□□□□ -0.5
RFFL-205ENST00000415395 MRPL42Q9Y6G3 142 aaKnown RBP11.9□□□□□ -0.5
RFFL-205ENST00000415395 IKBKGQ9Y6K9 419 aa11.9□□□□□ -0.5
RFFL-205ENST00000415395 IQANK1A0A1B0GTG1 560 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 H3BRJ5 948 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 TYROBPO43914 113 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 CCDC22O60826 627 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 ZNF189O75820 626 aaPredicted RBP11.89□□□□□ -0.51
RFFL-205ENST00000415395 GJB5O95377 273 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 GCAP28676 217 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 ADRA1BP35368 520 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 NR2C2P49116 596 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 TUFMP49411 452 aaKnown RBP11.89□□□□□ -0.51
RFFL-205ENST00000415395 PITX1P78337 314 aaPredicted RBP11.89□□□□□ -0.51
RFFL-205ENST00000415395 IRX1P78414 480 aaPredicted RBP11.89□□□□□ -0.51
RFFL-205ENST00000415395 ROR1Q01973 937 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 MMRN1Q13201 1228 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 NME3Q13232 169 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 EIF4EBP2Q13542 120 aaPredicted RBP11.89□□□□□ -0.51
RFFL-205ENST00000415395 CA9Q16790 459 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 MGAT5BQ3V5L5 792 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 MSANTD2Q6P1R3 559 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 LVRNQ6Q4G3 990 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 PRSS55Q6UWB4 352 aaPredicted RBP11.89□□□□□ -0.51
RFFL-205ENST00000415395 RSPO2Q6UXX9 243 aaPredicted RBP11.89□□□□□ -0.51
RFFL-205ENST00000415395 LONP2Q86WA8 852 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 PDIK1LQ8N165 341 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 PCDH19Q8TAB3 1148 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 DQX1Q8TE96 717 aaKnown RBP11.89□□□□□ -0.51
RFFL-205ENST00000415395 RSAD2Q8WXG1 361 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 ZNF75CPQ92670 426 aaPredicted RBP11.89□□□□□ -0.51
RFFL-205ENST00000415395 NAF1Q96HR8 494 aaKnown RBP11.89□□□□□ -0.51
RFFL-205ENST00000415395 PWWP2AQ96N64 755 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 PGLYRP2Q96PD5 576 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 KCTD15Q96SI1 283 aaPredicted RBP11.89□□□□□ -0.51
RFFL-205ENST00000415395 TRIM55Q9BYV6 548 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 FRMD8Q9BZ67 464 aaPredicted RBP11.89□□□□□ -0.51
RFFL-205ENST00000415395 DCLRE1BQ9H816 532 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.89□□□□□ -0.51
RFFL-205ENST00000415395 GPATCH2LQ9NWQ4 482 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 CLIC5Q9NZA1 410 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 STOML1Q9UBI4 398 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 AFF4Q9UHB7 1163 aaKnown RBP11.89□□□□□ -0.51
RFFL-205ENST00000415395 SSX2IPQ9Y2D8 614 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 MTO1Q9Y2Z2 717 aaKnown RBP11.89□□□□□ -0.51
RFFL-205ENST00000415395 WDR27A2RRH5 827 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 CFAP69A5D8W1 941 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 IRAK2O43187 625 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 VNN2O95498 520 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 URODP06132 367 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 TARSP26639 723 aaKnown RBP11.89□□□□□ -0.51
RFFL-205ENST00000415395 YWHAQP27348 245 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 STIP1P31948 543 aaKnown RBP11.89□□□□□ -0.51
RFFL-205ENST00000415395 HTR7P34969 479 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 RPA3P35244 121 aaPredicted RBP11.89□□□□□ -0.51
RFFL-205ENST00000415395 HCAR3P49019 387 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 ARPP19P56211 112 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 DYNLT1P63172 113 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 MRPS35P82673 323 aaKnown RBP11.89□□□□□ -0.51
RFFL-205ENST00000415395 DDR2Q16832 855 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 PPP6R3Q5H9R7 873 aaPredicted RBP11.89□□□□□ -0.51
RFFL-205ENST00000415395 CAPRIN2Q6IMN6 1127 aaKnown RBP11.89□□□□□ -0.51
RFFL-205ENST00000415395 ADGRD1Q6QNK2 874 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 C16orf59Q7L2K0 433 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 NLRP9Q7RTR0 991 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 OTOP2Q7RTS6 562 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 SCD5Q86SK9 330 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 TAC4Q86UU9 113 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 PALM2Q8IXS6 379 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 C4orf33Q8N1A6 199 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 PQLC3Q8N755 202 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 PLD5Q8N7P1 536 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 PHOSPHO2Q8TCD6 241 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 RNF139Q8WU17 664 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 OVCA2Q8WZ82 227 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 EDEM1Q92611 657 aa11.89□□□□□ -0.51
RFFL-205ENST00000415395 ZNF570Q96NI8 536 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms