RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 TBC1D30Q9Y2I9 924 aa15.08■□□□□ 0
LIMS1-206ENST00000414829 KMT2EQ8IZD2 1858 aa15.08■□□□□ 0
LIMS1-206ENST00000414829 TRIM24O15164 1050 aa15.07■□□□□ 0
LIMS1-206ENST00000414829 FGF10O15520 208 aaPredicted RBP15.07■□□□□ 0
LIMS1-206ENST00000414829 NRDCO43847 1150 aa15.07■□□□□ 0
LIMS1-206ENST00000414829 SYNCRIPO60506 623 aaKnown RBP15.07■□□□□ 0
LIMS1-206ENST00000414829 RHOCP08134 193 aa15.07■□□□□ 0
LIMS1-206ENST00000414829 OR1E1P30953 314 aa15.07■□□□□ 0
LIMS1-206ENST00000414829 PLK1P53350 603 aa15.07■□□□□ 0
LIMS1-206ENST00000414829 LMAN2Q12907 356 aa15.07■□□□□ 0
LIMS1-206ENST00000414829 HADHQ16836 314 aaKnown RBP15.07■□□□□ 0
LIMS1-206ENST00000414829 FNDC3BQ53EP0 1204 aaKnown RBP15.07■□□□□ 0
LIMS1-206ENST00000414829 SH3PXD2AQ5TCZ1 1133 aa15.07■□□□□ 0
LIMS1-206ENST00000414829 MANEALQ5VSG8 457 aa15.07■□□□□ 0
LIMS1-206ENST00000414829 EGFLAMQ63HQ2 1017 aa15.07■□□□□ 0
LIMS1-206ENST00000414829 MBLAC2Q68D91 279 aa15.07■□□□□ 0
LIMS1-206ENST00000414829 SERPINA13PQ6UXR4 307 aa15.07■□□□□ 0
LIMS1-206ENST00000414829 C11orf74Q86VG3 221 aa15.07■□□□□ 0
LIMS1-206ENST00000414829 LONP2Q86WA8 852 aa15.07■□□□□ 0
LIMS1-206ENST00000414829 ZNF683Q8IZ20 524 aa15.07■□□□□ 0
LIMS1-206ENST00000414829 ATOH1Q92858 354 aaPredicted RBP15.07■□□□□ 0
LIMS1-206ENST00000414829 CALR3Q96L12 384 aaKnown RBP15.07■□□□□ 0
LIMS1-206ENST00000414829 GABRG3Q99928 467 aa15.07■□□□□ 0
LIMS1-206ENST00000414829 C2orf49Q9BVC5 232 aaPredicted RBP15.07■□□□□ 0
LIMS1-206ENST00000414829 CATSPERBQ9H7T0 1116 aa15.07■□□□□ 0
LIMS1-206ENST00000414829 SPTLC3Q9NUV7 552 aa15.07■□□□□ 0
LIMS1-206ENST00000414829 EBF1Q9UH73 591 aa15.07■□□□□ 0
LIMS1-206ENST00000414829 FZD10Q9ULW2 581 aa15.07■□□□□ 0
LIMS1-206ENST00000414829 CXorf51AA0A1B0GTR3 108 aa15.06■□□□□ 0
LIMS1-206ENST00000414829 GOLGA6L3A6NEY3 463 aa15.06■□□□□ 0
LIMS1-206ENST00000414829 H0Y858 1186 aa15.06■□□□□ 0
LIMS1-206ENST00000414829 K7ESF4 209 aa15.06■□□□□ 0
LIMS1-206ENST00000414829 SRGAP2O75044 1071 aa15.06■□□□□ 0
LIMS1-206ENST00000414829 LRCH4O75427 683 aa15.06■□□□□ 0
LIMS1-206ENST00000414829 SRPRAP08240 638 aaKnown RBP15.06■□□□□ 0
LIMS1-206ENST00000414829 RHOQP17081 205 aa15.06■□□□□ 0
LIMS1-206ENST00000414829 CD70P32970 193 aa15.06■□□□□ 0
LIMS1-206ENST00000414829 MAN1A1P33908 653 aa15.06■□□□□ 0
LIMS1-206ENST00000414829 GGCXP38435 758 aa15.06■□□□□ 0
LIMS1-206ENST00000414829 KRT83P78385 493 aa15.06■□□□□ 0
LIMS1-206ENST00000414829 OGDHQ02218 1023 aa15.06■□□□□ 0
LIMS1-206ENST00000414829 ENPP2Q13822 863 aa15.06■□□□□ 0
LIMS1-206ENST00000414829 BYSLQ13895 437 aaKnown RBP15.06■□□□□ 0
LIMS1-206ENST00000414829 PLEKHG6Q3KR16 790 aa15.06■□□□□ 0
LIMS1-206ENST00000414829 FUT11Q495W5 492 aa15.06■□□□□ 0
LIMS1-206ENST00000414829 BOLA3Q53S33 107 aa15.06■□□□□ 0
LIMS1-206ENST00000414829 PITRM1Q5JRX3 1037 aa15.06■□□□□ 0
LIMS1-206ENST00000414829 ERMARDQ5T6L9 678 aa15.06■□□□□ 0
LIMS1-206ENST00000414829 CXorf57Q6NSI4 855 aaKnown RBP15.06■□□□□ 0
LIMS1-206ENST00000414829 RWDD4Q6NW29 188 aaKnown RBP15.06■□□□□ 0
LIMS1-206ENST00000414829 ADIPOR2Q86V24 386 aa15.06■□□□□ 0
LIMS1-206ENST00000414829 MAML2Q8IZL2 1156 aaPredicted RBP15.06■□□□□ 0
LIMS1-206ENST00000414829 CCDC33Q8N5R6 958 aa15.06■□□□□ 0
LIMS1-206ENST00000414829 CCDC185Q8N715 623 aa15.06■□□□□ 0
LIMS1-206ENST00000414829 DCAF4L2Q8NA75 395 aa15.06■□□□□ 0
LIMS1-206ENST00000414829 ANP32BQ92688 251 aaKnown RBP15.06■□□□□ 0
LIMS1-206ENST00000414829 NELL1Q92832 810 aa15.06■□□□□ 0
LIMS1-206ENST00000414829 IGSF8Q969P0 613 aa15.06■□□□□ 0
LIMS1-206ENST00000414829 TTC17Q96AE7 1141 aa15.06■□□□□ 0
LIMS1-206ENST00000414829 MYEOVQ96EZ4 313 aa15.06■□□□□ 0
LIMS1-206ENST00000414829 P2RY11Q96G91 374 aa15.06■□□□□ 0
LIMS1-206ENST00000414829 BAG1Q99933 345 aaPredicted RBP15.06■□□□□ 0
LIMS1-206ENST00000414829 MUC3BQ9H195 1237 aa15.06■□□□□ 0
LIMS1-206ENST00000414829 ANLNQ9NQW6 1124 aa15.06■□□□□ 0
LIMS1-206ENST00000414829 VPS28Q9UK41 221 aa15.06■□□□□ 0
LIMS1-206ENST00000414829 CLEC4EQ9ULY5 219 aa15.06■□□□□ 0
LIMS1-206ENST00000414829 USP18Q9UMW8 372 aa15.06■□□□□ 0
LIMS1-206ENST00000414829 AP4E1Q9UPM8 1137 aa15.06■□□□□ 0
LIMS1-206ENST00000414829 KIAA1549LQ6ZVL6 1849 aa15.06■□□□□ 0
LIMS1-206ENST00000414829 ILVBLA1L0T0 632 aa15.05■□□□□ -0
LIMS1-206ENST00000414829 I6L893 689 aaPredicted RBP15.05■□□□□ -0
LIMS1-206ENST00000414829 SGK1O00141 431 aa15.05■□□□□ -0
LIMS1-206ENST00000414829 LRIG2O94898 1065 aa15.05■□□□□ -0
LIMS1-206ENST00000414829 LCA5LO95447 670 aa15.05■□□□□ -0
LIMS1-206ENST00000414829 CHRM1P11229 460 aaPredicted RBP15.05■□□□□ -0
LIMS1-206ENST00000414829 EPHB2P29323 1055 aa15.05■□□□□ -0
LIMS1-206ENST00000414829 MIPP30301 263 aa15.05■□□□□ -0
LIMS1-206ENST00000414829 HOXC13P31276 330 aa15.05■□□□□ -0
LIMS1-206ENST00000414829 CSKP41240 450 aa15.05■□□□□ -0
LIMS1-206ENST00000414829 ARHGAP25P42331 645 aa15.05■□□□□ -0
LIMS1-206ENST00000414829 VASPP50552 380 aaPredicted RBP15.05■□□□□ -0
LIMS1-206ENST00000414829 GEMIN4P57678 1058 aaKnown RBP15.05■□□□□ -0
LIMS1-206ENST00000414829 TPI1P60174 286 aa15.05■□□□□ -0
LIMS1-206ENST00000414829 ECT2LQ008S8 904 aa15.05■□□□□ -0
LIMS1-206ENST00000414829 ZNF252P-AS1Q0IIN9 211 aa15.05■□□□□ -0
LIMS1-206ENST00000414829 ZNF234Q14588 700 aa15.05■□□□□ -0
LIMS1-206ENST00000414829 PKN3Q6P5Z2 889 aa15.05■□□□□ -0
LIMS1-206ENST00000414829 C14orf80Q86SX3 495 aa15.05■□□□□ -0
LIMS1-206ENST00000414829 WDR5BQ86VZ2 330 aa15.05■□□□□ -0
LIMS1-206ENST00000414829 CIR1Q86X95 450 aaPredicted RBP15.05■□□□□ -0
LIMS1-206ENST00000414829 DNAAF5Q86Y56 855 aa15.05■□□□□ -0
LIMS1-206ENST00000414829 SFTPA1Q8IWL2 248 aa15.05■□□□□ -0
LIMS1-206ENST00000414829 ZBTB44Q8NCP5 570 aa15.05■□□□□ -0
LIMS1-206ENST00000414829 WFDC5Q8TCV5 224 aa15.05■□□□□ -0
LIMS1-206ENST00000414829 TEKT4Q8WW24 435 aa15.05■□□□□ -0
LIMS1-206ENST00000414829 LMLNQ96KR4 655 aa15.05■□□□□ -0
LIMS1-206ENST00000414829 SPACA7Q96KW9 195 aa15.05■□□□□ -0
LIMS1-206ENST00000414829 ZWILCHQ9H900 591 aa15.05■□□□□ -0
LIMS1-206ENST00000414829 TMEM248Q9NWD8 314 aa15.05■□□□□ -0
LIMS1-206ENST00000414829 BCCIPQ9P287 314 aaKnown RBP eCLIP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms