RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 GPM6BQ13491 265 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 ZNF460Q14592 562 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 HERC3Q15034 1050 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 NONOQ15233 471 aaKnown RBP eCLIP3.76□□□□□ -1.81
SF3B1-203ENST00000414174 UBE3CQ15386 1083 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 SURF1Q15526 300 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 NDUFA5Q16718 116 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 CCDC142Q17RM4 750 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 TYSND1Q2T9J0 566 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 ZACNQ401N2 412 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 CTXN3Q4LDR2 81 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 TCP11X2Q5H9J9 407 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 FSCBQ5H9T9 825 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 FAM209AQ5JX71 171 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 ATPAF1Q5TC12 328 aaPredicted RBP3.76□□□□□ -1.81
SF3B1-203ENST00000414174 ZNF658Q5TYW1 1059 aaPredicted RBP3.76□□□□□ -1.81
SF3B1-203ENST00000414174 KLHL24Q6TFL4 600 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 CRTC3Q6UUV7 619 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 LRRC31Q6UY01 552 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 TRIM72Q6ZMU5 477 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 KIF6Q6ZMV9 814 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 TMTC3Q6ZXV5 915 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 MARK2Q7KZI7 788 aaKnown RBP3.76□□□□□ -1.81
SF3B1-203ENST00000414174 LIMS2Q7Z4I7 341 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 ASPGQ86U10 573 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 TLK2Q86UE8 772 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 AKAP14Q86UN6 197 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 SLC51BQ86UW2 128 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 APLFQ8IW19 511 aaPredicted RBP3.76□□□□□ -1.81
SF3B1-203ENST00000414174 PHC2Q8IXK0 858 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 LRRC34Q8IZ02 419 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 ST13P4Q8IZP2 240 aaPredicted RBP3.76□□□□□ -1.81
SF3B1-203ENST00000414174 PYROXD2Q8N2H3 581 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 MPP5Q8N3R9 675 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 ARFGAP2Q8N6H7 521 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 FAM133AQ8N9E0 248 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 LINC01356Q8N9X3 169 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 PIK3C3Q8NEB9 887 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 OR8K1Q8NGG5 319 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 OR52M1Q8NGK5 317 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 FIBINQ8TAL6 211 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 KLHDC4Q8TBB5 520 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 BRI3BPQ8WY22 251 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 RFKQ969G6 155 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 AHCYL2Q96HN2 611 aaKnown RBP3.76□□□□□ -1.81
SF3B1-203ENST00000414174 FAM71F1Q96KD3 344 aaPredicted RBP3.76□□□□□ -1.81
SF3B1-203ENST00000414174 TMEM68Q96MH6 324 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 SLC2A13Q96QE2 648 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 USP28Q96RU2 1077 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 PRRX2Q99811 253 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 ORAI3Q9BRQ5 295 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 ERP44Q9BS26 406 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 BDH2Q9BUT1 245 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 CNPPD1Q9BV87 410 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 PACSIN1Q9BY11 444 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 PITHD1Q9GZP4 211 aaPredicted RBP3.76□□□□□ -1.81
SF3B1-203ENST00000414174 ADAM7Q9H2U9 754 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 SYNDIG1Q9H7V2 258 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 MRPL44Q9H9J2 332 aaKnown RBP3.76□□□□□ -1.81
SF3B1-203ENST00000414174 KIF9Q9HAQ2 790 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 PARVBQ9HBI1 364 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 ERVK-5Q9HDB9 667 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 NRIP3Q9NQ35 241 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 AGPAT3Q9NRZ7 376 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 CHST7Q9NS84 486 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 SENP1Q9P0U3 644 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 CRNNQ9UBG3 495 aaPredicted RBP3.76□□□□□ -1.81
SF3B1-203ENST00000414174 DNAJB9Q9UBS3 223 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 ASIC3Q9UHC3 531 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 CIDEBQ9UHD4 219 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 TSPYL4Q9UJ04 414 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 ITGA11Q9UKX5 1188 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 VANGL2Q9ULK5 521 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 MAGED2Q9UNF1 606 aaPredicted RBP3.76□□□□□ -1.81
SF3B1-203ENST00000414174 STX8Q9UNK0 236 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 BZW2Q9Y6E2 419 aaKnown RBP3.76□□□□□ -1.81
SF3B1-203ENST00000414174 IBTKQ9P2D0 1353 aaPredicted RBP3.76□□□□□ -1.81
SF3B1-203ENST00000414174 IGSF1Q8N6C5 1336 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 TRBV23-1A0A0A0MS06 115 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 TTC26A0AVF1 554 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 GOLGA8JA6NMD2 632 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 RHPN2P1A8MT19 583 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 FADS2P1A8MWK0 482 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 FOXO6A8MYZ6 492 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 H3BML4 177 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 GOLGA8TH3BQL2 631 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 GOLGA8RI6L899 631 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 SYT5O00445 386 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 MEIS1O00470 390 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 ACKR2O00590 384 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 RAD51BO15315 384 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 BIRC5O15392 142 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 CYTIPO60759 359 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 CTAG2O75638 210 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 RBBP9O75884 186 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 ATP5HO75947 161 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 TOMM70O94826 608 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 ZNF205O95201 554 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 GNA14O95837 355 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 CYP1A1P04798 512 aaPredicted RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms