RNA–Protein interactions for RNA: ENST00000410466.1

RNU6-554P-201, Transcript of RNA, U6 small nuclear 554, pseudogene, humanhuman

BASIC

Gene RNU6-554P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-554P-201ENST00000410466 BICD2Q8TD16 824 aa0.78□□□□□ -2.28
RNU6-554P-201ENST00000410466 RAPGEF4Q8WZA2 1011 aa0.78□□□□□ -2.28
RNU6-554P-201ENST00000410466 ZNF653Q96CK0 615 aa0.78□□□□□ -2.28
RNU6-554P-201ENST00000410466 PRR11Q96HE9 360 aaPredicted RBP0.78□□□□□ -2.28
RNU6-554P-201ENST00000410466 ZNF845Q96IR2 970 aaPredicted RBP0.78□□□□□ -2.28
RNU6-554P-201ENST00000410466 FAM167AQ96KS9 214 aa0.78□□□□□ -2.28
RNU6-554P-201ENST00000410466 FSD1Q9BTV5 496 aa0.78□□□□□ -2.28
RNU6-554P-201ENST00000410466 LDHAL6BQ9BYZ2 381 aaPredicted RBP0.78□□□□□ -2.28
RNU6-554P-201ENST00000410466 MS4A7Q9GZW8 240 aaPredicted RBP0.78□□□□□ -2.28
RNU6-554P-201ENST00000410466 SAP30LQ9HAJ7 183 aa0.78□□□□□ -2.28
RNU6-554P-201ENST00000410466 EBF2Q9HAK2 575 aa0.78□□□□□ -2.28
RNU6-554P-201ENST00000410466 RNF146Q9NTX7 359 aa0.78□□□□□ -2.28
RNU6-554P-201ENST00000410466 VPS4AQ9UN37 437 aa0.78□□□□□ -2.28
RNU6-554P-201ENST00000410466 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP0.78□□□□□ -2.28
RNU6-554P-201ENST00000410466 ZNF646O15015 1829 aaPredicted RBP0.78□□□□□ -2.29
RNU6-554P-201ENST00000410466 IGHV4-28A0A0C4DH34 117 aa0.77□□□□□ -2.29
RNU6-554P-201ENST00000410466 NPIPB11E5RHQ5 1161 aa0.77□□□□□ -2.29
RNU6-554P-201ENST00000410466 H7C423 109 aa0.77□□□□□ -2.29
RNU6-554P-201ENST00000410466 IGLV1-44P01699 117 aa0.77□□□□□ -2.29
RNU6-554P-201ENST00000410466 THP07101 528 aa0.77□□□□□ -2.29
RNU6-554P-201ENST00000410466 PARP1P09874 1014 aaKnown RBP0.77□□□□□ -2.29
RNU6-554P-201ENST00000410466 TMEM225BP0DP42 221 aa0.77□□□□□ -2.29
RNU6-554P-201ENST00000410466 SRCP12931 536 aa0.77□□□□□ -2.29
RNU6-554P-201ENST00000410466 DUSP1P28562 367 aa0.77□□□□□ -2.29
RNU6-554P-201ENST00000410466 TLX1P31314 330 aaPredicted RBP0.77□□□□□ -2.29
RNU6-554P-201ENST00000410466 CCR10P46092 362 aa0.77□□□□□ -2.29
RNU6-554P-201ENST00000410466 ZBTB16Q05516 673 aa0.77□□□□□ -2.29
RNU6-554P-201ENST00000410466 DMWDQ09019 674 aa0.77□□□□□ -2.29
RNU6-554P-201ENST00000410466 STRN3Q13033 797 aa0.77□□□□□ -2.29
RNU6-554P-201ENST00000410466 GAB1Q13480 694 aa0.77□□□□□ -2.29
RNU6-554P-201ENST00000410466 ACAP2Q15057 778 aa0.77□□□□□ -2.29
RNU6-554P-201ENST00000410466 XKR4Q5GH76 650 aa0.77□□□□□ -2.29
RNU6-554P-201ENST00000410466 LRRTM1Q86UE6 522 aa0.77□□□□□ -2.29
RNU6-554P-201ENST00000410466 SLC25A41Q8N5S1 370 aa0.77□□□□□ -2.29
RNU6-554P-201ENST00000410466 DMBX1Q8NFW5 382 aa0.77□□□□□ -2.29
RNU6-554P-201ENST00000410466 COA7Q96BR5 231 aa0.77□□□□□ -2.29
RNU6-554P-201ENST00000410466 KLHL29Q96CT2 875 aa0.77□□□□□ -2.29
RNU6-554P-201ENST00000410466 TXNDC15Q96J42 360 aa0.77□□□□□ -2.29
RNU6-554P-201ENST00000410466 ART5Q96L15 291 aa0.77□□□□□ -2.29
RNU6-554P-201ENST00000410466 FOXN4Q96NZ1 517 aa0.77□□□□□ -2.29
RNU6-554P-201ENST00000410466 ERVMER34-1Q9H9K5 563 aa0.77□□□□□ -2.29
RNU6-554P-201ENST00000410466 PNRC2Q9NPJ4 139 aaKnown RBP0.77□□□□□ -2.29
RNU6-554P-201ENST00000410466 ZDHHC18Q9NUE0 388 aa0.77□□□□□ -2.29
RNU6-554P-201ENST00000410466 PNPOQ9NVS9 261 aa0.77□□□□□ -2.29
RNU6-554P-201ENST00000410466 TAAR2Q9P1P5 351 aa0.77□□□□□ -2.29
RNU6-554P-201ENST00000410466 MAPRE3Q9UPY8 281 aa0.77□□□□□ -2.29
RNU6-554P-201ENST00000410466 CSAG2Q9Y5P2 127 aa0.77□□□□□ -2.29
RNU6-554P-201ENST00000410466 SOS1Q07889 1333 aaPredicted RBP0.77□□□□□ -2.29
RNU6-554P-201ENST00000410466 FBN3Q75N90 2809 aa0.76□□□□□ -2.29
RNU6-554P-201ENST00000410466 ATXN2Q99700 1313 aaKnown RBP0.76□□□□□ -2.29
RNU6-554P-201ENST00000410466 A0A1W2PS18 150 aa0.76□□□□□ -2.29
RNU6-554P-201ENST00000410466 LILRA5A6NI73 299 aa0.76□□□□□ -2.29
RNU6-554P-201ENST00000410466 TRIM75PA6NK02 468 aa0.76□□□□□ -2.29
RNU6-554P-201ENST00000410466 HNRNPCL2B2RXH8 293 aa0.76□□□□□ -2.29
RNU6-554P-201ENST00000410466 AGPSO00116 658 aa0.76□□□□□ -2.29
RNU6-554P-201ENST00000410466 PDE8AO60658 829 aa0.76□□□□□ -2.29
RNU6-554P-201ENST00000410466 MAP4K4O95819 1239 aaPredicted RBP0.76□□□□□ -2.29
RNU6-554P-201ENST00000410466 HNRNPA1P09651 372 aaKnown RBP eCLIP0.76□□□□□ -2.29
RNU6-554P-201ENST00000410466 GNLYP22749 145 aa0.76□□□□□ -2.29
RNU6-554P-201ENST00000410466 SYT16Q17RD7 645 aa0.76□□□□□ -2.29
RNU6-554P-201ENST00000410466 ZNF284Q2VY69 593 aa0.76□□□□□ -2.29
RNU6-554P-201ENST00000410466 UAP1L1Q3KQV9 507 aa0.76□□□□□ -2.29
RNU6-554P-201ENST00000410466 XKR9Q5GH70 373 aa0.76□□□□□ -2.29
RNU6-554P-201ENST00000410466 LMBRD2Q68DH5 695 aaPredicted RBP0.76□□□□□ -2.29
RNU6-554P-201ENST00000410466 USP49Q70CQ1 688 aa0.76□□□□□ -2.29
RNU6-554P-201ENST00000410466 DDX46Q7L014 1031 aaKnown RBP0.76□□□□□ -2.29
RNU6-554P-201ENST00000410466 PALB2Q86YC2 1186 aa0.76□□□□□ -2.29
RNU6-554P-201ENST00000410466 NEXN-AS1Q8NBZ9 246 aa0.76□□□□□ -2.29
RNU6-554P-201ENST00000410466 JADE3Q92613 823 aa0.76□□□□□ -2.29
RNU6-554P-201ENST00000410466 B3GNT4Q9C0J1 378 aa0.76□□□□□ -2.29
RNU6-554P-201ENST00000410466 PTPRHQ9HD43 1115 aa0.76□□□□□ -2.29
RNU6-554P-201ENST00000410466 TMEM160Q9NX00 188 aa0.76□□□□□ -2.29
RNU6-554P-201ENST00000410466 PLAAQ9Y263 795 aa0.76□□□□□ -2.29
RNU6-554P-201ENST00000410466 SRPRBQ9Y5M8 271 aaKnown RBP0.76□□□□□ -2.29
RNU6-554P-201ENST00000410466 HIVEP2P31629 2446 aa0.75□□□□□ -2.29
RNU6-554P-201ENST00000410466 A0A0U1RQJ8 604 aa0.75□□□□□ -2.29
RNU6-554P-201ENST00000410466 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP0.75□□□□□ -2.29
RNU6-554P-201ENST00000410466 MBD3L4A6NDZ8 208 aaPredicted RBP0.75□□□□□ -2.29
RNU6-554P-201ENST00000410466 MBD3L3A6NE82 208 aaPredicted RBP0.75□□□□□ -2.29
RNU6-554P-201ENST00000410466 MBD3L5A6NJ08 208 aaPredicted RBP0.75□□□□□ -2.29
RNU6-554P-201ENST00000410466 E9PQ18 207 aa0.75□□□□□ -2.29
RNU6-554P-201ENST00000410466 STMND1H3BQB6 276 aa0.75□□□□□ -2.29
RNU6-554P-201ENST00000410466 LDB2O43679 373 aa0.75□□□□□ -2.29
RNU6-554P-201ENST00000410466 SNX2O60749 519 aa0.75□□□□□ -2.29
RNU6-554P-201ENST00000410466 WDR47O94967 919 aa0.75□□□□□ -2.29
RNU6-554P-201ENST00000410466 FTLP02792 175 aaPredicted RBP0.75□□□□□ -2.29
RNU6-554P-201ENST00000410466 PATE4P0C8F1 98 aa0.75□□□□□ -2.29
RNU6-554P-201ENST00000410466 MATN1P21941 496 aa0.75□□□□□ -2.29
RNU6-554P-201ENST00000410466 SLC8A1P32418 973 aa0.75□□□□□ -2.29
RNU6-554P-201ENST00000410466 MFAP1P55081 439 aaKnown RBP0.75□□□□□ -2.29
RNU6-554P-201ENST00000410466 TMPRSS15P98073 1019 aa0.75□□□□□ -2.29
RNU6-554P-201ENST00000410466 CLCA4Q14CN2 919 aa0.75□□□□□ -2.29
RNU6-554P-201ENST00000410466 INSCQ1MX18 579 aa0.75□□□□□ -2.29
RNU6-554P-201ENST00000410466 TKFCQ3LXA3 575 aa0.75□□□□□ -2.29
RNU6-554P-201ENST00000410466 KHDC1LQ5JSQ8 128 aa0.75□□□□□ -2.29
RNU6-554P-201ENST00000410466 GRHL2Q6ISB3 625 aa0.75□□□□□ -2.29
RNU6-554P-201ENST00000410466 LCTLQ6UWM7 567 aa0.75□□□□□ -2.29
RNU6-554P-201ENST00000410466 CLEC9AQ6UXN8 241 aa0.75□□□□□ -2.29
RNU6-554P-201ENST00000410466 NOTCH2NLQ7Z3S9 236 aa0.75□□□□□ -2.29
RNU6-554P-201ENST00000410466 LMNTD2Q8IXW0 634 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms