RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 CBFA2T3O75081 653 aa4.99□□□□□ -1.61
CLK1-203ENST00000409769 BCAR3O75815 825 aa4.99□□□□□ -1.61
CLK1-203ENST00000409769 HOXB7P09629 217 aa4.99□□□□□ -1.61
CLK1-203ENST00000409769 ARP10275 920 aa4.99□□□□□ -1.61
CLK1-203ENST00000409769 HARSP12081 509 aaKnown RBP4.99□□□□□ -1.61
CLK1-203ENST00000409769 CREB1P16220 341 aa4.99□□□□□ -1.61
CLK1-203ENST00000409769 EGR1P18146 543 aa4.99□□□□□ -1.61
CLK1-203ENST00000409769 EEF1GP26641 437 aaKnown RBP4.99□□□□□ -1.61
CLK1-203ENST00000409769 MST1P26927 711 aa4.99□□□□□ -1.61
CLK1-203ENST00000409769 HTR3AP46098 478 aa4.99□□□□□ -1.61
CLK1-203ENST00000409769 DIO1P49895 249 aa4.99□□□□□ -1.61
CLK1-203ENST00000409769 RARSP54136 660 aaKnown RBP4.99□□□□□ -1.61
CLK1-203ENST00000409769 MTAPQ13126 283 aa4.99□□□□□ -1.61
CLK1-203ENST00000409769 SLC39A6Q13433 755 aa4.99□□□□□ -1.61
CLK1-203ENST00000409769 HDAC1Q13547 482 aaPredicted RBP4.99□□□□□ -1.61
CLK1-203ENST00000409769 MAPKAPK3Q16644 382 aa4.99□□□□□ -1.61
CLK1-203ENST00000409769 TWISTNBQ3B726 338 aaPredicted RBP4.99□□□□□ -1.61
CLK1-203ENST00000409769 ALDH1L2Q3SY69 923 aa4.99□□□□□ -1.61
CLK1-203ENST00000409769 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.99□□□□□ -1.61
CLK1-203ENST00000409769 L1TD1Q5T7N2 865 aaKnown RBP4.99□□□□□ -1.61
CLK1-203ENST00000409769 RRAGBQ5VZM2 374 aa4.99□□□□□ -1.61
CLK1-203ENST00000409769 ABLIM2Q6H8Q1 611 aa4.99□□□□□ -1.61
CLK1-203ENST00000409769 TLDC1Q6P9B6 456 aa4.99□□□□□ -1.61
CLK1-203ENST00000409769 ZNF790Q6PG37 636 aa4.99□□□□□ -1.61
CLK1-203ENST00000409769 CRTC1Q6UUV9 634 aa4.99□□□□□ -1.61
CLK1-203ENST00000409769 CRELD2Q6UXH1 353 aaPredicted RBP4.99□□□□□ -1.61
CLK1-203ENST00000409769 NOL8Q76FK4 1167 aaKnown RBP4.99□□□□□ -1.61
CLK1-203ENST00000409769 BCDIN3DQ7Z5W3 292 aaKnown RBP4.99□□□□□ -1.61
CLK1-203ENST00000409769 CNGA4Q8IV77 575 aa4.99□□□□□ -1.61
CLK1-203ENST00000409769 FAM186BQ8IYM0 893 aa4.99□□□□□ -1.61
CLK1-203ENST00000409769 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.99□□□□□ -1.61
CLK1-203ENST00000409769 PARD3BQ8TEW8 1205 aa4.99□□□□□ -1.61
CLK1-203ENST00000409769 ABHD5Q8WTS1 349 aa4.99□□□□□ -1.61
CLK1-203ENST00000409769 PIGBQ92521 554 aa4.99□□□□□ -1.61
CLK1-203ENST00000409769 SLC39A13Q96H72 371 aa4.99□□□□□ -1.61
CLK1-203ENST00000409769 CHST12Q9NRB3 414 aa4.99□□□□□ -1.61
CLK1-203ENST00000409769 RGL1Q9NZL6 768 aa4.99□□□□□ -1.61
CLK1-203ENST00000409769 CA14Q9ULX7 337 aa4.99□□□□□ -1.61
CLK1-203ENST00000409769 MAN2B2Q9Y2E5 1009 aa4.99□□□□□ -1.61
CLK1-203ENST00000409769 TAF1LQ8IZX4 1826 aa4.99□□□□□ -1.61
CLK1-203ENST00000409769 TNS1Q9HBL0 1735 aaKnown RBP4.98□□□□□ -1.61
CLK1-203ENST00000409769 TCRBV5S1A1TA0A578 114 aa4.98□□□□□ -1.61
CLK1-203ENST00000409769 H3BNC9 293 aa4.98□□□□□ -1.61
CLK1-203ENST00000409769 CES2O00748 559 aa4.98□□□□□ -1.61
CLK1-203ENST00000409769 CCNT2O60583 730 aaKnown RBP4.98□□□□□ -1.61
CLK1-203ENST00000409769 PLA2G6O60733 806 aa4.98□□□□□ -1.61
CLK1-203ENST00000409769 FGBP02675 491 aa4.98□□□□□ -1.61
CLK1-203ENST00000409769 ADRA1DP25100 572 aa4.98□□□□□ -1.61
CLK1-203ENST00000409769 MCM5P33992 734 aa4.98□□□□□ -1.61
CLK1-203ENST00000409769 HSPA7P48741 367 aa4.98□□□□□ -1.61
CLK1-203ENST00000409769 DGKQP52824 942 aa4.98□□□□□ -1.61
CLK1-203ENST00000409769 RRP1P56182 461 aaKnown RBP4.98□□□□□ -1.61
CLK1-203ENST00000409769 LMAN2Q12907 356 aa4.98□□□□□ -1.61
CLK1-203ENST00000409769 ATP1A4Q13733 1029 aa4.98□□□□□ -1.61
CLK1-203ENST00000409769 RAPGEF1Q13905 1077 aa4.98□□□□□ -1.61
CLK1-203ENST00000409769 UBE4AQ14139 1066 aa4.98□□□□□ -1.61
CLK1-203ENST00000409769 TOGARAM2Q6ZUX3 1019 aa4.98□□□□□ -1.61
CLK1-203ENST00000409769 SRLQ86TD4 932 aa4.98□□□□□ -1.61
CLK1-203ENST00000409769 CCDC28AQ8IWP9 274 aa4.98□□□□□ -1.61
CLK1-203ENST00000409769 TXLNBQ8N3L3 684 aa4.98□□□□□ -1.61
CLK1-203ENST00000409769 PNPLA1Q8N8W4 532 aa4.98□□□□□ -1.61
CLK1-203ENST00000409769 LRRC46Q96FV0 321 aa4.98□□□□□ -1.61
CLK1-203ENST00000409769 RITA1Q96K30 269 aa4.98□□□□□ -1.61
CLK1-203ENST00000409769 NUDT22Q9BRQ3 303 aa4.98□□□□□ -1.61
CLK1-203ENST00000409769 CIPCQ9C0C6 399 aa4.98□□□□□ -1.61
CLK1-203ENST00000409769 AS3MTQ9HBK9 375 aa4.98□□□□□ -1.61
CLK1-203ENST00000409769 GJB4Q9NTQ9 266 aa4.98□□□□□ -1.61
CLK1-203ENST00000409769 TMOD3Q9NYL9 352 aa4.98□□□□□ -1.61
CLK1-203ENST00000409769 TFCP2L1Q9NZI6 479 aa4.98□□□□□ -1.61
CLK1-203ENST00000409769 MGAT4CQ9UBM8 478 aa4.98□□□□□ -1.61
CLK1-203ENST00000409769 RGPD3A6NKT7 1758 aaPredicted RBP4.97□□□□□ -1.61
CLK1-203ENST00000409769 RGPD4Q7Z3J3 1758 aa4.97□□□□□ -1.61
CLK1-203ENST00000409769 WDR47O94967 919 aa4.97□□□□□ -1.61
CLK1-203ENST00000409769 PDE8BO95263 885 aa4.97□□□□□ -1.61
CLK1-203ENST00000409769 MT-CO3P00414 261 aa4.97□□□□□ -1.61
CLK1-203ENST00000409769 SNHG28P0DPA3 235 aa4.97□□□□□ -1.61
CLK1-203ENST00000409769 FPR3P25089 353 aa4.97□□□□□ -1.61
CLK1-203ENST00000409769 NTSR1P30989 418 aa4.97□□□□□ -1.61
CLK1-203ENST00000409769 ARHGAP25P42331 645 aa4.97□□□□□ -1.61
CLK1-203ENST00000409769 RENBPP51606 427 aa4.97□□□□□ -1.61
CLK1-203ENST00000409769 CFHR3Q02985 330 aa4.97□□□□□ -1.61
CLK1-203ENST00000409769 KCNJ12Q14500 433 aa4.97□□□□□ -1.61
CLK1-203ENST00000409769 MPEG1Q2M385 716 aa4.97□□□□□ -1.61
CLK1-203ENST00000409769 ARL6IP4Q66PJ3 421 aaKnown RBP4.97□□□□□ -1.61
CLK1-203ENST00000409769 CLEC9AQ6UXN8 241 aa4.97□□□□□ -1.61
CLK1-203ENST00000409769 ZNF813Q6ZN06 617 aa4.97□□□□□ -1.61
CLK1-203ENST00000409769 GLIS1Q8NBF1 620 aa4.97□□□□□ -1.61
CLK1-203ENST00000409769 ZNF398Q8TD17 642 aa4.97□□□□□ -1.61
CLK1-203ENST00000409769 ADAMTS18Q8TE60 1221 aa4.97□□□□□ -1.61
CLK1-203ENST00000409769 ZNF566Q969W8 418 aa4.97□□□□□ -1.61
CLK1-203ENST00000409769 EDC3Q96F86 508 aaKnown RBP4.97□□□□□ -1.61
CLK1-203ENST00000409769 KAZALD1Q96I82 304 aa4.97□□□□□ -1.61
CLK1-203ENST00000409769 VPS50Q96JG6 964 aa4.97□□□□□ -1.61
CLK1-203ENST00000409769 FYTTD1Q96QD9 318 aaKnown RBP4.97□□□□□ -1.61
CLK1-203ENST00000409769 MACROD1Q9BQ69 325 aa4.97□□□□□ -1.61
CLK1-203ENST00000409769 ADGRE3Q9BY15 652 aa4.97□□□□□ -1.61
CLK1-203ENST00000409769 STK33Q9BYT3 514 aa4.97□□□□□ -1.61
CLK1-203ENST00000409769 SPRTNQ9H040 489 aaPredicted RBP4.97□□□□□ -1.61
CLK1-203ENST00000409769 CERS4Q9HA82 394 aa4.97□□□□□ -1.61
CLK1-203ENST00000409769 ASIC5Q9NY37 505 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms