RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 PIGRP01833 764 aa17.15■□□□□ 0.34
PCDHA13-202ENST00000409494 SMAD1Q15797 465 aaKnown RBP17.15■□□□□ 0.34
PCDHA13-202ENST00000409494 LRRC23Q53EV4 343 aaPredicted RBP17.15■□□□□ 0.34
PCDHA13-202ENST00000409494 TMEM159Q96B96 161 aa17.15■□□□□ 0.34
PCDHA13-202ENST00000409494 PCDHGC3Q9UN70 934 aa17.15■□□□□ 0.34
PCDHA13-202ENST00000409494 EPHB6O15197 1021 aa17.14■□□□□ 0.33
PCDHA13-202ENST00000409494 PCDH8O95206 1070 aa17.14■□□□□ 0.33
PCDHA13-202ENST00000409494 C4BPAP04003 597 aaKnown RBP17.14■□□□□ 0.33
PCDHA13-202ENST00000409494 MBTD1Q05BQ5 628 aa17.14■□□□□ 0.33
PCDHA13-202ENST00000409494 FAM46CQ5VWP2 391 aa17.14■□□□□ 0.33
PCDHA13-202ENST00000409494 LPPQ93052 612 aa17.14■□□□□ 0.33
PCDHA13-202ENST00000409494 OLFM3Q96PB7 478 aa17.14■□□□□ 0.33
PCDHA13-202ENST00000409494 EEF1B2P24534 225 aaKnown RBP17.14■□□□□ 0.33
PCDHA13-202ENST00000409494 MTM1Q13496 603 aa17.14■□□□□ 0.33
PCDHA13-202ENST00000409494 LYPLAL1Q5VWZ2 237 aa17.14■□□□□ 0.33
PCDHA13-202ENST00000409494 DNAJC9Q8WXX5 260 aa17.14■□□□□ 0.33
PCDHA13-202ENST00000409494 SLC28A3Q9HAS3 691 aa17.14■□□□□ 0.33
PCDHA13-202ENST00000409494 MARCOQ9UEW3 520 aaPredicted RBP17.14■□□□□ 0.33
PCDHA13-202ENST00000409494 CILPO75339 1184 aa17.14■□□□□ 0.33
PCDHA13-202ENST00000409494 MZF1P28698 734 aaPredicted RBP17.14■□□□□ 0.33
PCDHA13-202ENST00000409494 SERPINH1P50454 418 aaKnown RBP17.14■□□□□ 0.33
PCDHA13-202ENST00000409494 SKP1P63208 163 aa17.14■□□□□ 0.33
PCDHA13-202ENST00000409494 MED21Q13503 144 aa17.14■□□□□ 0.33
PCDHA13-202ENST00000409494 PEX6Q13608 980 aa17.14■□□□□ 0.33
PCDHA13-202ENST00000409494 SLC25A52Q3SY17 297 aa17.14■□□□□ 0.33
PCDHA13-202ENST00000409494 FNDC3BQ53EP0 1204 aaKnown RBP17.14■□□□□ 0.33
PCDHA13-202ENST00000409494 ZSWIM2Q8NEG5 633 aa17.14■□□□□ 0.33
PCDHA13-202ENST00000409494 TMEM161AQ9NX61 479 aa17.14■□□□□ 0.33
PCDHA13-202ENST00000409494 VPS51Q9UID3 782 aa17.14■□□□□ 0.33
PCDHA13-202ENST00000409494 TSPAN3O60637 253 aa17.14■□□□□ 0.33
PCDHA13-202ENST00000409494 C22orf31O95567 290 aa17.14■□□□□ 0.33
PCDHA13-202ENST00000409494 ZC3H12AQ5D1E8 599 aaKnown RBP17.14■□□□□ 0.33
PCDHA13-202ENST00000409494 PCID2Q5JVF3 399 aa17.14■□□□□ 0.33
PCDHA13-202ENST00000409494 B2RBV5 119 aa17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 GPR25O00155 361 aa17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 DYRK3O43781 588 aa17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 KRT6AP02538 564 aa17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 KRT6BP04259 564 aa17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 KRT6CP48668 564 aa17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 DPYSL3Q14195 570 aa17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 IRF2BP2Q7Z5L9 587 aa17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 ZCCHC9Q8N567 271 aaKnown RBP17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 SIKE1Q9BRV8 207 aa17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 SNRNP25Q9BV90 132 aaKnown RBP17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 ING2Q9H160 280 aa17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 PCYOX1Q9UHG3 505 aa17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 ADAM28Q9UKQ2 775 aa17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 REXO2Q9Y3B8 237 aaKnown RBP17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 WNT7AO00755 349 aa17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 RAD51BO15315 384 aa17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 ACLYP53396 1101 aa17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 PRKCZQ05513 592 aa17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 PATL1Q86TB9 770 aaKnown RBP17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 TEX9Q8N6V9 391 aa17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 MCOLN3Q8TDD5 553 aa17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 PIK3R5Q8WYR1 880 aa17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 NSL1Q96IY1 281 aa17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 ANLNQ9NQW6 1124 aa17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 ITGAVP06756 1048 aa17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 MMP8P22894 467 aa17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 PSRC1Q6PGN9 363 aaPredicted RBP17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 KCNMB4Q86W47 210 aa17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 OR9Q1Q8NGQ5 310 aa17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 ATP13A3Q9H7F0 1226 aa17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 NRDE2Q9H7Z3 1164 aa17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 RMND5AQ9H871 391 aa17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 SOX13Q9UN79 622 aa17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 RIPK2O43353 540 aa17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 TLR5O60602 858 aa17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 MAP3K6O95382 1288 aa17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 CPA3P15088 417 aa17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 OR1D2P34982 312 aa17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 MAD2L1Q13257 205 aaPredicted RBP17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 GRB14Q14449 540 aa17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 TTMPQ5BVD1 217 aa17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 INTS6LQ5JSJ4 861 aaKnown RBP17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 CORO1BQ9BR76 489 aa17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 KIF17Q9P2E2 1029 aa17.13■□□□□ 0.33
PCDHA13-202ENST00000409494 SCN11AQ9UI33 1791 aa17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 TBC1D3BA6NDS4 549 aa17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 MYBL2P10244 700 aa17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 ALOX15P16050 662 aaPredicted RBP17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 HPCAP84074 193 aa17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 GLT6D1Q7Z4J2 308 aa17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 FUBP3Q96I24 572 aaKnown RBP eCLIP17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 LRRC19Q9H756 370 aa17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 DMAC2Q9NW81 257 aa17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 SNX5Q9Y5X3 404 aa17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 CLDN11O75508 207 aa17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 ADH1CP00326 375 aa17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 HSPA1AP0DMV8 641 aaKnown RBP17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 HSPA1BP0DMV9 641 aaKnown RBP17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 ELK3P41970 407 aa17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 DYNC1I2Q13409 638 aaKnown RBP17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 FAM187BQ17R55 369 aa17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 FBXL19Q6PCT2 694 aa17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 LNX1Q8TBB1 728 aaPredicted RBP17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 AGR3Q8TD06 166 aa17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 PGM2Q96G03 612 aa17.12■□□□□ 0.33
PCDHA13-202ENST00000409494 SNX27Q96L92 541 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms