RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 BRD8Q9H0E9 1235 aa13.41□□□□□ -0.26
LIMS2-203ENST00000409254 C8orf33Q9H7E9 229 aaPredicted RBP13.41□□□□□ -0.26
LIMS2-203ENST00000409254 BRD9Q9H8M2 597 aa13.41□□□□□ -0.26
LIMS2-203ENST00000409254 ECT2Q9H8V3 914 aa13.41□□□□□ -0.26
LIMS2-203ENST00000409254 FBXO10Q9UK96 956 aa13.41□□□□□ -0.26
LIMS2-203ENST00000409254 DUSP12Q9UNI6 340 aa13.41□□□□□ -0.26
LIMS2-203ENST00000409254 SLC27A6Q9Y2P4 619 aa13.41□□□□□ -0.26
LIMS2-203ENST00000409254 SAR1BQ9Y6B6 198 aa13.41□□□□□ -0.26
LIMS2-203ENST00000409254 WNT6Q9Y6F9 365 aa13.41□□□□□ -0.26
LIMS2-203ENST00000409254 ILVBLA1L0T0 632 aa13.4□□□□□ -0.26
LIMS2-203ENST00000409254 FAM72CH0Y354 149 aa13.4□□□□□ -0.26
LIMS2-203ENST00000409254 APOC4-APOC2K7ER74 178 aa13.4□□□□□ -0.26
LIMS2-203ENST00000409254 KCNK3O14649 394 aa13.4□□□□□ -0.26
LIMS2-203ENST00000409254 CREB3O43889 395 aa13.4□□□□□ -0.26
LIMS2-203ENST00000409254 LUC7L3O95232 432 aaKnown RBP13.4□□□□□ -0.26
LIMS2-203ENST00000409254 APOC2P02655 101 aa13.4□□□□□ -0.26
LIMS2-203ENST00000409254 ATP1A1P05023 1023 aaKnown RBP13.4□□□□□ -0.26
LIMS2-203ENST00000409254 BMP1P13497 986 aa13.4□□□□□ -0.26
LIMS2-203ENST00000409254 GDI1P31150 447 aa13.4□□□□□ -0.26
LIMS2-203ENST00000409254 CASQ1P31415 396 aa13.4□□□□□ -0.26
LIMS2-203ENST00000409254 GJC1P36383 396 aa13.4□□□□□ -0.26
LIMS2-203ENST00000409254 KLF1Q13351 362 aaPredicted RBP13.4□□□□□ -0.26
LIMS2-203ENST00000409254 PARP15Q460N3 678 aa13.4□□□□□ -0.26
LIMS2-203ENST00000409254 LY6G5CQ5SRR4 150 aa13.4□□□□□ -0.26
LIMS2-203ENST00000409254 FAM72AQ5TYM5 149 aa13.4□□□□□ -0.26
LIMS2-203ENST00000409254 FAM72DQ6L9T8 149 aa13.4□□□□□ -0.26
LIMS2-203ENST00000409254 RFWD3Q6PCD5 774 aa13.4□□□□□ -0.26
LIMS2-203ENST00000409254 RHBDF2Q6PJF5 856 aa13.4□□□□□ -0.26
LIMS2-203ENST00000409254 TMCO3Q6UWJ1 677 aa13.4□□□□□ -0.26
LIMS2-203ENST00000409254 MFSD7Q6UXD7 560 aa13.4□□□□□ -0.26
LIMS2-203ENST00000409254 FAM72BQ86X60 149 aa13.4□□□□□ -0.26
LIMS2-203ENST00000409254 CCDC50Q8IVM0 306 aa13.4□□□□□ -0.26
LIMS2-203ENST00000409254 ETFBKMTQ8IXQ9 262 aa13.4□□□□□ -0.26
LIMS2-203ENST00000409254 UBALD2Q8IYN6 164 aa13.4□□□□□ -0.26
LIMS2-203ENST00000409254 PYROXD2Q8N2H3 581 aa13.4□□□□□ -0.26
LIMS2-203ENST00000409254 C17orf53Q8N3J3 647 aaPredicted RBP13.4□□□□□ -0.26
LIMS2-203ENST00000409254 SLC44A3Q8N4M1 653 aa13.4□□□□□ -0.26
LIMS2-203ENST00000409254 KIF18AQ8NI77 898 aa13.4□□□□□ -0.26
LIMS2-203ENST00000409254 FIBINQ8TAL6 211 aa13.4□□□□□ -0.26
LIMS2-203ENST00000409254 ACTRT1Q8TDG2 376 aa13.4□□□□□ -0.26
LIMS2-203ENST00000409254 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.4□□□□□ -0.26
LIMS2-203ENST00000409254 WFIKKN2Q8TEU8 576 aa13.4□□□□□ -0.26
LIMS2-203ENST00000409254 FATE1Q969F0 183 aa13.4□□□□□ -0.26
LIMS2-203ENST00000409254 BBS2Q9BXC9 721 aa13.4□□□□□ -0.26
LIMS2-203ENST00000409254 MAK16Q9BXY0 300 aaKnown RBP13.4□□□□□ -0.26
LIMS2-203ENST00000409254 MAGEH1Q9H213 219 aa13.4□□□□□ -0.26
LIMS2-203ENST00000409254 HPS4Q9NQG7 708 aa13.4□□□□□ -0.26
LIMS2-203ENST00000409254 TMPRSS4Q9NRS4 437 aa13.4□□□□□ -0.26
LIMS2-203ENST00000409254 HOMER3Q9NSC5 361 aa13.4□□□□□ -0.26
LIMS2-203ENST00000409254 GPATCH2LQ9NWQ4 482 aa13.4□□□□□ -0.26
LIMS2-203ENST00000409254 DNAI1Q9UI46 699 aa13.4□□□□□ -0.26
LIMS2-203ENST00000409254 PACSIN2Q9UNF0 486 aaPredicted RBP13.4□□□□□ -0.26
LIMS2-203ENST00000409254 SORCS3Q9UPU3 1222 aa13.4□□□□□ -0.26
LIMS2-203ENST00000409254 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.39□□□□□ -0.27
LIMS2-203ENST00000409254 ZSCAN5CA6NGD5 496 aaPredicted RBP13.39□□□□□ -0.27
LIMS2-203ENST00000409254 PGRMC1O00264 195 aaKnown RBP13.39□□□□□ -0.27
LIMS2-203ENST00000409254 APOL1O14791 398 aa13.39□□□□□ -0.27
LIMS2-203ENST00000409254 DAPK3O43293 454 aa13.39□□□□□ -0.27
LIMS2-203ENST00000409254 PYGMP11217 842 aa13.39□□□□□ -0.27
LIMS2-203ENST00000409254 TYRP14679 529 aa13.39□□□□□ -0.27
LIMS2-203ENST00000409254 ERCC2P18074 760 aa13.39□□□□□ -0.27
LIMS2-203ENST00000409254 MX2P20592 715 aa13.39□□□□□ -0.27
LIMS2-203ENST00000409254 VASPP50552 380 aaPredicted RBP13.39□□□□□ -0.27
LIMS2-203ENST00000409254 PLK1P53350 603 aa13.39□□□□□ -0.27
LIMS2-203ENST00000409254 RPS24P62847 133 aaKnown RBP13.39□□□□□ -0.27
LIMS2-203ENST00000409254 ZNF177Q13360 481 aaPredicted RBP13.39□□□□□ -0.27
LIMS2-203ENST00000409254 CDH18Q13634 790 aa13.39□□□□□ -0.27
LIMS2-203ENST00000409254 EIF4HQ15056 248 aaKnown RBP13.39□□□□□ -0.27
LIMS2-203ENST00000409254 ATP13A4Q4VNC1 1196 aa13.39□□□□□ -0.27
LIMS2-203ENST00000409254 TMCO4Q5TGY1 634 aa13.39□□□□□ -0.27
LIMS2-203ENST00000409254 AFMIDQ63HM1 303 aa13.39□□□□□ -0.27
LIMS2-203ENST00000409254 RWDD4Q6NW29 188 aaKnown RBP13.39□□□□□ -0.27
LIMS2-203ENST00000409254 NUDT18Q6ZVK8 323 aa13.39□□□□□ -0.27
LIMS2-203ENST00000409254 KIAA0907Q7Z7F0 614 aaPredicted RBP13.39□□□□□ -0.27
LIMS2-203ENST00000409254 C14orf80Q86SX3 495 aa13.39□□□□□ -0.27
LIMS2-203ENST00000409254 METTL3Q86U44 580 aaKnown RBP13.39□□□□□ -0.27
LIMS2-203ENST00000409254 RALGPS2Q86X27 583 aaPredicted RBP13.39□□□□□ -0.27
LIMS2-203ENST00000409254 TMEM25Q86YD3 366 aa13.39□□□□□ -0.27
LIMS2-203ENST00000409254 PCDH19Q8TAB3 1148 aa13.39□□□□□ -0.27
LIMS2-203ENST00000409254 CSGALNACT1Q8TDX6 532 aa13.39□□□□□ -0.27
LIMS2-203ENST00000409254 DDI1Q8WTU0 396 aa13.39□□□□□ -0.27
LIMS2-203ENST00000409254 IGSF8Q969P0 613 aa13.39□□□□□ -0.27
LIMS2-203ENST00000409254 PLA2G2FQ9BZM2 168 aa13.39□□□□□ -0.27
LIMS2-203ENST00000409254 PRDM6Q9NQX0 595 aa13.39□□□□□ -0.27
LIMS2-203ENST00000409254 LIMD1Q9UGP4 676 aa13.39□□□□□ -0.27
LIMS2-203ENST00000409254 VCANP13611 3396 aa13.38□□□□□ -0.27
LIMS2-203ENST00000409254 ENC1O14682 589 aa13.38□□□□□ -0.27
LIMS2-203ENST00000409254 TBL1XO60907 577 aa13.38□□□□□ -0.27
LIMS2-203ENST00000409254 SRGAP2O75044 1071 aa13.38□□□□□ -0.27
LIMS2-203ENST00000409254 CD48P09326 243 aa13.38□□□□□ -0.27
LIMS2-203ENST00000409254 TNNT1P13805 278 aa13.38□□□□□ -0.27
LIMS2-203ENST00000409254 OR1E1P30953 314 aa13.38□□□□□ -0.27
LIMS2-203ENST00000409254 GEMIN4P57678 1058 aaKnown RBP13.38□□□□□ -0.27
LIMS2-203ENST00000409254 XRCC4Q13426 336 aa13.38□□□□□ -0.27
LIMS2-203ENST00000409254 GRM2Q14416 872 aa13.38□□□□□ -0.27
LIMS2-203ENST00000409254 TJAP1Q5JTD0 557 aa13.38□□□□□ -0.27
LIMS2-203ENST00000409254 NCBP2-AS2Q69YL0 99 aa13.38□□□□□ -0.27
LIMS2-203ENST00000409254 CXorf57Q6NSI4 855 aaKnown RBP13.38□□□□□ -0.27
LIMS2-203ENST00000409254 SYT10Q6XYQ8 523 aa13.38□□□□□ -0.27
LIMS2-203ENST00000409254 SLC13A5Q86YT5 568 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms