RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 ANKLE1Q8NAG6 615 aa19.45■□□□□ 0.7
USP39-202ENST00000409025 MGARPQ8TDB4 240 aa19.45■□□□□ 0.7
USP39-202ENST00000409025 GIPC2Q8TF65 315 aa19.45■□□□□ 0.7
USP39-202ENST00000409025 DCAKDQ8WVC6 231 aa19.45■□□□□ 0.7
USP39-202ENST00000409025 TOP1MTQ969P6 601 aa19.45■□□□□ 0.7
USP39-202ENST00000409025 VWCEQ96DN2 955 aa19.45■□□□□ 0.7
USP39-202ENST00000409025 CHMP6Q96FZ7 201 aa19.45■□□□□ 0.7
USP39-202ENST00000409025 SMC6Q96SB8 1091 aa19.45■□□□□ 0.7
USP39-202ENST00000409025 FAM107BQ9H098 131 aa19.45■□□□□ 0.7
USP39-202ENST00000409025 CCDC134Q9H6E4 229 aa19.45■□□□□ 0.7
USP39-202ENST00000409025 RSPH14Q9UHP6 348 aa19.45■□□□□ 0.7
USP39-202ENST00000409025 TTLL3Q9Y4R7 772 aa19.45■□□□□ 0.7
USP39-202ENST00000409025 MYO18AQ92614 2054 aaKnown RBP19.44■□□□□ 0.7
USP39-202ENST00000409025 DFFAO00273 331 aa19.44■□□□□ 0.7
USP39-202ENST00000409025 ADAM12O43184 909 aa19.44■□□□□ 0.7
USP39-202ENST00000409025 OR1D2P34982 312 aa19.44■□□□□ 0.7
USP39-202ENST00000409025 C1QTNF8P60827 252 aa19.44■□□□□ 0.7
USP39-202ENST00000409025 UNC5AQ6ZN44 842 aa19.44■□□□□ 0.7
USP39-202ENST00000409025 MPP5Q8N3R9 675 aa19.44■□□□□ 0.7
USP39-202ENST00000409025 CEP295NLQ96MC4 621 aa19.44■□□□□ 0.7
USP39-202ENST00000409025 VN1R3Q9BXE9 311 aa19.44■□□□□ 0.7
USP39-202ENST00000409025 GBA3Q9H227 469 aa19.44■□□□□ 0.7
USP39-202ENST00000409025 C11orf49Q9H6J7 331 aa19.44■□□□□ 0.7
USP39-202ENST00000409025 MARCH2Q9P0N8 246 aa19.44■□□□□ 0.7
USP39-202ENST00000409025 NUP205Q92621 2012 aa19.43■□□□□ 0.7
USP39-202ENST00000409025 SDR42E2A6NKP2 422 aa19.43■□□□□ 0.7
USP39-202ENST00000409025 ZBTB24O43167 697 aaPredicted RBP19.43■□□□□ 0.7
USP39-202ENST00000409025 PIAS1O75925 651 aa19.43■□□□□ 0.7
USP39-202ENST00000409025 INHBAP08476 426 aa19.43■□□□□ 0.7
USP39-202ENST00000409025 CCNCP24863 283 aa19.43■□□□□ 0.7
USP39-202ENST00000409025 TUFMP49411 452 aaKnown RBP19.43■□□□□ 0.7
USP39-202ENST00000409025 ZBTB17Q13105 803 aa19.43■□□□□ 0.7
USP39-202ENST00000409025 PIK3R6Q5UE93 754 aa19.43■□□□□ 0.7
USP39-202ENST00000409025 FBXO46Q6PJ61 603 aaPredicted RBP19.43■□□□□ 0.7
USP39-202ENST00000409025 C14orf80Q86SX3 495 aa19.43■□□□□ 0.7
USP39-202ENST00000409025 ATPAF2Q8N5M1 289 aa19.43■□□□□ 0.7
USP39-202ENST00000409025 GSDMBQ8TAX9 411 aa19.43■□□□□ 0.7
USP39-202ENST00000409025 SLC44A1Q8WWI5 657 aa19.43■□□□□ 0.7
USP39-202ENST00000409025 STAMBPL1Q96FJ0 436 aa19.43■□□□□ 0.7
USP39-202ENST00000409025 AGAP3Q96P47 875 aa19.43■□□□□ 0.7
USP39-202ENST00000409025 TSGA13Q96PP4 275 aa19.43■□□□□ 0.7
USP39-202ENST00000409025 SMG5Q9UPR3 1016 aaKnown RBP19.43■□□□□ 0.7
USP39-202ENST00000409025 PCDHA11Q9Y5I1 949 aa19.43■□□□□ 0.7
USP39-202ENST00000409025 IQANK1A0A1B0GTG1 560 aa19.43■□□□□ 0.7
USP39-202ENST00000409025 FAM47DPA6NHR8 397 aa19.43■□□□□ 0.7
USP39-202ENST00000409025 EBAG9O00559 213 aa19.43■□□□□ 0.7
USP39-202ENST00000409025 TBX18O95935 607 aa19.43■□□□□ 0.7
USP39-202ENST00000409025 RPL17P18621 184 aaKnown RBP19.43■□□□□ 0.7
USP39-202ENST00000409025 ATF6P18850 670 aa19.43■□□□□ 0.7
USP39-202ENST00000409025 GBP2P32456 591 aaPredicted RBP19.43■□□□□ 0.7
USP39-202ENST00000409025 GJA8P48165 433 aa19.43■□□□□ 0.7
USP39-202ENST00000409025 IFNAR2P48551 515 aa19.43■□□□□ 0.7
USP39-202ENST00000409025 MPP2Q14168 576 aa19.43■□□□□ 0.7
USP39-202ENST00000409025 LRRC14Q15048 493 aa19.43■□□□□ 0.7
USP39-202ENST00000409025 ARTNQ5T4W7 220 aa19.43■□□□□ 0.7
USP39-202ENST00000409025 MIB1Q86YT6 1006 aa19.43■□□□□ 0.7
USP39-202ENST00000409025 ARHGAP12Q8IWW6 846 aa19.43■□□□□ 0.7
USP39-202ENST00000409025 RTL3Q8N8U3 475 aaKnown RBP19.43■□□□□ 0.7
USP39-202ENST00000409025 ZNF558Q96NG5 402 aa19.43■□□□□ 0.7
USP39-202ENST00000409025 MAGED2Q9UNF1 606 aaPredicted RBP19.43■□□□□ 0.7
USP39-202ENST00000409025 SHROOM3Q8TF72 1996 aa19.43■□□□□ 0.7
USP39-202ENST00000409025 ERI2A8K979 691 aaKnown RBP19.42■□□□□ 0.7
USP39-202ENST00000409025 WASH4PA8MWX3 477 aa19.42■□□□□ 0.7
USP39-202ENST00000409025 C2CD2LO14523 706 aa19.42■□□□□ 0.7
USP39-202ENST00000409025 PRPF4O43172 522 aaKnown RBP eCLIP19.42■□□□□ 0.7
USP39-202ENST00000409025 JCHAINP01591 159 aa19.42■□□□□ 0.7
USP39-202ENST00000409025 SOD2P04179 222 aa19.42■□□□□ 0.7
USP39-202ENST00000409025 ZDHHC11BP0C7U3 371 aa19.42■□□□□ 0.7
USP39-202ENST00000409025 PRKCHP24723 683 aa19.42■□□□□ 0.7
USP39-202ENST00000409025 LRRC26Q2I0M4 334 aa19.42■□□□□ 0.7
USP39-202ENST00000409025 CPLX4Q7Z7G2 160 aa19.42■□□□□ 0.7
USP39-202ENST00000409025 PRPF39Q86UA1 669 aaKnown RBP19.42■□□□□ 0.7
USP39-202ENST00000409025 TAX1BP1Q86VP1 789 aa19.42■□□□□ 0.7
USP39-202ENST00000409025 CCNJLQ8IV13 435 aa19.42■□□□□ 0.7
USP39-202ENST00000409025 ZNF689Q96CS4 500 aaPredicted RBP19.42■□□□□ 0.7
USP39-202ENST00000409025 PAWRQ96IZ0 340 aaKnown RBP19.42■□□□□ 0.7
USP39-202ENST00000409025 BTN2A3PQ96KV6 586 aa19.42■□□□□ 0.7
USP39-202ENST00000409025 TEKT5Q96M29 485 aa19.42■□□□□ 0.7
USP39-202ENST00000409025 TTLL2Q9BWV7 592 aa19.42■□□□□ 0.7
USP39-202ENST00000409025 UBE2OQ9C0C9 1292 aaKnown RBP19.42■□□□□ 0.7
USP39-202ENST00000409025 SLC39A8Q9C0K1 460 aa19.42■□□□□ 0.7
USP39-202ENST00000409025 PLAC1Q9HBJ0 212 aa19.42■□□□□ 0.7
USP39-202ENST00000409025 FNIP2Q9P278 1114 aa19.42■□□□□ 0.7
USP39-202ENST00000409025 LTBP2Q14767 1821 aa19.42■□□□□ 0.7
USP39-202ENST00000409025 COL4A6Q14031 1691 aa19.42■□□□□ 0.7
USP39-202ENST00000409025 A0A1W2PPM1 405 aa19.41■□□□□ 0.7
USP39-202ENST00000409025 SLC12A8A0AV02 714 aa19.41■□□□□ 0.7
USP39-202ENST00000409025 ARHGAP42A6NI28 874 aa19.41■□□□□ 0.7
USP39-202ENST00000409025 SPAG7O75391 227 aa19.41■□□□□ 0.7
USP39-202ENST00000409025 AP2A1O95782 977 aa19.41■□□□□ 0.7
USP39-202ENST00000409025 CD68P34810 354 aaPredicted RBP19.41■□□□□ 0.7
USP39-202ENST00000409025 SLC18A1P54219 525 aa19.41■□□□□ 0.7
USP39-202ENST00000409025 SESN2P58004 480 aaPredicted RBP19.41■□□□□ 0.7
USP39-202ENST00000409025 PRPSAP1Q14558 356 aa19.41■□□□□ 0.7
USP39-202ENST00000409025 MS4A13Q5J8X5 152 aa19.41■□□□□ 0.7
USP39-202ENST00000409025 CASC4Q6P4E1 433 aa19.41■□□□□ 0.7
USP39-202ENST00000409025 SLC26A11Q86WA9 606 aa19.41■□□□□ 0.7
USP39-202ENST00000409025 LRRC6Q86X45 466 aa19.41■□□□□ 0.7
USP39-202ENST00000409025 CTAGE3PQ8IX95 158 aa19.41■□□□□ 0.7
USP39-202ENST00000409025 C4orf33Q8N1A6 199 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms