RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 TGFB2P61812 414 aa5.6□□□□□ -1.51
HMGB3P19-201ENST00000403971 PDCLQ13371 301 aa5.6□□□□□ -1.51
HMGB3P19-201ENST00000403971 ZNF569Q5MCW4 686 aa5.6□□□□□ -1.51
HMGB3P19-201ENST00000403971 TMEM65Q6PI78 240 aa5.6□□□□□ -1.51
HMGB3P19-201ENST00000403971 KYAT3Q6YP21 454 aaKnown RBP5.6□□□□□ -1.51
HMGB3P19-201ENST00000403971 DCDC5Q6ZRR9 648 aa5.6□□□□□ -1.51
HMGB3P19-201ENST00000403971 RFX8Q6ZV50 586 aa5.6□□□□□ -1.51
HMGB3P19-201ENST00000403971 SYT13Q7L8C5 426 aa5.6□□□□□ -1.51
HMGB3P19-201ENST00000403971 SMAP1Q8IYB5 467 aaPredicted RBP5.6□□□□□ -1.51
HMGB3P19-201ENST00000403971 OR52L2PQ8NGH6 319 aa5.6□□□□□ -1.51
HMGB3P19-201ENST00000403971 GOLGA1Q92805 767 aa5.6□□□□□ -1.51
HMGB3P19-201ENST00000403971 GCC1Q96CN9 775 aa5.6□□□□□ -1.51
HMGB3P19-201ENST00000403971 TRMT61AQ96FX7 289 aaKnown RBP5.6□□□□□ -1.51
HMGB3P19-201ENST00000403971 FAR2Q96K12 515 aa5.6□□□□□ -1.51
HMGB3P19-201ENST00000403971 ADGRE3Q9BY15 652 aa5.6□□□□□ -1.51
HMGB3P19-201ENST00000403971 STK26Q9P289 416 aa5.6□□□□□ -1.51
HMGB3P19-201ENST00000403971 ZNHIT2Q9UHR6 403 aa5.6□□□□□ -1.51
HMGB3P19-201ENST00000403971 NFU1Q9UMS0 254 aa5.6□□□□□ -1.51
HMGB3P19-201ENST00000403971 SLC12A4Q9UP95 1085 aa5.6□□□□□ -1.51
HMGB3P19-201ENST00000403971 INSL6Q9Y581 213 aa5.6□□□□□ -1.51
HMGB3P19-201ENST00000403971 WNT6Q9Y6F9 365 aa5.6□□□□□ -1.51
HMGB3P19-201ENST00000403971 NALCNQ8IZF0 1738 aa5.6□□□□□ -1.51
HMGB3P19-201ENST00000403971 FMN2Q9NZ56 1722 aa5.6□□□□□ -1.51
HMGB3P19-201ENST00000403971 TULP4Q9NRJ4 1543 aa5.59□□□□□ -1.51
HMGB3P19-201ENST00000403971 NCOA3Q9Y6Q9 1424 aa5.59□□□□□ -1.51
HMGB3P19-201ENST00000403971 DISP3Q9P2K9 1392 aa5.59□□□□□ -1.51
HMGB3P19-201ENST00000403971 KIF7Q2M1P5 1343 aa5.59□□□□□ -1.51
HMGB3P19-201ENST00000403971 AGAP5A6NIR3 686 aa5.59□□□□□ -1.51
HMGB3P19-201ENST00000403971 C16orf96A6NNT2 1141 aa5.59□□□□□ -1.51
HMGB3P19-201ENST00000403971 EFCAB8A8MWE9 144 aa5.59□□□□□ -1.51
HMGB3P19-201ENST00000403971 E7EVH7 732 aa5.59□□□□□ -1.51
HMGB3P19-201ENST00000403971 GCATO75600 419 aa5.59□□□□□ -1.51
HMGB3P19-201ENST00000403971 HEXIM1O94992 359 aaKnown RBP5.59□□□□□ -1.51
HMGB3P19-201ENST00000403971 KAT7O95251 611 aa5.59□□□□□ -1.51
HMGB3P19-201ENST00000403971 LARGE1O95461 756 aa5.59□□□□□ -1.51
HMGB3P19-201ENST00000403971 AGTR2P50052 363 aa5.59□□□□□ -1.51
HMGB3P19-201ENST00000403971 SOX10P56693 466 aa5.59□□□□□ -1.51
HMGB3P19-201ENST00000403971 WDR5P61964 334 aaKnown RBP5.59□□□□□ -1.51
HMGB3P19-201ENST00000403971 CBFBQ13951 182 aa5.59□□□□□ -1.51
HMGB3P19-201ENST00000403971 KCNB1Q14721 858 aa5.59□□□□□ -1.51
HMGB3P19-201ENST00000403971 TMEM119Q4V9L6 283 aa5.59□□□□□ -1.51
HMGB3P19-201ENST00000403971 SYNE3Q6ZMZ3 975 aa5.59□□□□□ -1.51
HMGB3P19-201ENST00000403971 FAM98AQ8NCA5 519 aaKnown RBP5.59□□□□□ -1.51
HMGB3P19-201ENST00000403971 OR6Y1Q8NGX8 325 aa5.59□□□□□ -1.51
HMGB3P19-201ENST00000403971 SPPL3Q8TCT6 385 aa5.59□□□□□ -1.51
HMGB3P19-201ENST00000403971 CLEC4CQ8WTT0 213 aa5.59□□□□□ -1.51
HMGB3P19-201ENST00000403971 GLMPQ8WWB7 406 aa5.59□□□□□ -1.51
HMGB3P19-201ENST00000403971 THAP4Q8WY91 577 aa5.59□□□□□ -1.51
HMGB3P19-201ENST00000403971 CPT1BQ92523 772 aa5.59□□□□□ -1.51
HMGB3P19-201ENST00000403971 PRAM1Q96QH2 718 aa5.59□□□□□ -1.51
HMGB3P19-201ENST00000403971 TMPRSS5Q9H3S3 457 aa5.59□□□□□ -1.51
HMGB3P19-201ENST00000403971 ABHD16BQ9H3Z7 469 aa5.59□□□□□ -1.51
HMGB3P19-201ENST00000403971 LIN7CQ9NUP9 197 aaKnown RBP5.59□□□□□ -1.51
HMGB3P19-201ENST00000403971 RRN3Q9NYV6 651 aa5.59□□□□□ -1.51
HMGB3P19-201ENST00000403971 RCE1Q9Y256 329 aa5.59□□□□□ -1.51
HMGB3P19-201ENST00000403971 PCDHA10Q9Y5I2 948 aa5.59□□□□□ -1.51
HMGB3P19-201ENST00000403971 TOPAZ1Q8N9V7 1692 aa5.59□□□□□ -1.52
HMGB3P19-201ENST00000403971 CDC42BPGQ6DT37 1551 aa5.59□□□□□ -1.52
HMGB3P19-201ENST00000403971 NINLQ9Y2I6 1382 aa5.58□□□□□ -1.52
HMGB3P19-201ENST00000403971 AKAP12Q02952 1782 aa5.58□□□□□ -1.52
HMGB3P19-201ENST00000403971 EVC2Q86UK5 1308 aa5.58□□□□□ -1.52
HMGB3P19-201ENST00000403971 FAM90A20PA6NIJ5 464 aa5.58□□□□□ -1.52
HMGB3P19-201ENST00000403971 H3BNC9 293 aa5.58□□□□□ -1.52
HMGB3P19-201ENST00000403971 H7C1Q1 480 aa5.58□□□□□ -1.52
HMGB3P19-201ENST00000403971 EIF3FO00303 357 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P19-201ENST00000403971 IGLV2-14P01704 120 aa5.58□□□□□ -1.52
HMGB3P19-201ENST00000403971 HSD3B1P14060 373 aa5.58□□□□□ -1.52
HMGB3P19-201ENST00000403971 RXRAP19793 462 aa5.58□□□□□ -1.52
HMGB3P19-201ENST00000403971 MATN1P21941 496 aa5.58□□□□□ -1.52
HMGB3P19-201ENST00000403971 DUSP1P28562 367 aa5.58□□□□□ -1.52
HMGB3P19-201ENST00000403971 GRK5P34947 590 aa5.58□□□□□ -1.52
HMGB3P19-201ENST00000403971 MAPK9P45984 424 aa5.58□□□□□ -1.52
HMGB3P19-201ENST00000403971 CCT5P48643 541 aa5.58□□□□□ -1.52
HMGB3P19-201ENST00000403971 AARSP49588 968 aaKnown RBP eCLIP5.58□□□□□ -1.52
HMGB3P19-201ENST00000403971 FOXL2P58012 376 aa5.58□□□□□ -1.52
HMGB3P19-201ENST00000403971 TAS2R50P59544 299 aa5.58□□□□□ -1.52
HMGB3P19-201ENST00000403971 SLC14A1Q13336 389 aa5.58□□□□□ -1.52
HMGB3P19-201ENST00000403971 LARS2Q15031 903 aaKnown RBP5.58□□□□□ -1.52
HMGB3P19-201ENST00000403971 LRRC24Q50LG9 513 aa5.58□□□□□ -1.52
HMGB3P19-201ENST00000403971 CHSY1Q86X52 802 aa5.58□□□□□ -1.52
HMGB3P19-201ENST00000403971 C2CD5Q86YS7 1000 aa5.58□□□□□ -1.52
HMGB3P19-201ENST00000403971 ANKRD18AQ8IVF6 992 aa5.58□□□□□ -1.52
HMGB3P19-201ENST00000403971 HERC6Q8IVU3 1022 aa5.58□□□□□ -1.52
HMGB3P19-201ENST00000403971 AKAP1Q92667 903 aaKnown RBP eCLIP5.58□□□□□ -1.52
HMGB3P19-201ENST00000403971 RITA1Q96K30 269 aa5.58□□□□□ -1.52
HMGB3P19-201ENST00000403971 ZSCAN31Q96LW9 406 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P19-201ENST00000403971 CCDC17Q96LX7 622 aa5.58□□□□□ -1.52
HMGB3P19-201ENST00000403971 SORCS2Q96PQ0 1159 aa5.58□□□□□ -1.52
HMGB3P19-201ENST00000403971 MRIQ9BWK5 157 aa5.58□□□□□ -1.52
HMGB3P19-201ENST00000403971 ARHGAP39Q9C0H5 1083 aa5.58□□□□□ -1.52
HMGB3P19-201ENST00000403971 CHODLQ9H9P2 273 aa5.58□□□□□ -1.52
HMGB3P19-201ENST00000403971 NDUFAF4Q9P032 175 aa5.58□□□□□ -1.52
HMGB3P19-201ENST00000403971 SEMA5BQ9P283 1151 aa5.58□□□□□ -1.52
HMGB3P19-201ENST00000403971 PLEKHH1Q9ULM0 1364 aa5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 AOX1Q06278 1338 aa5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 WDR33Q9C0J8 1336 aaKnown RBP5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 USP32Q8NFA0 1604 aa5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 TBC1D3DA0A087WVF3 549 aa5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 TBC1D3IA0A087WXS9 549 aa5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 TBC1D3EA0A087X179 549 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms