RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 ENDOVQ8N8Q3 282 aaKnown RBP16.38■□□□□ 0.21
CHRFAM7A-203ENST00000401522 CFAP61Q8NHU2 1237 aa16.38■□□□□ 0.21
CHRFAM7A-203ENST00000401522 STK32AQ8WU08 396 aa16.38■□□□□ 0.21
CHRFAM7A-203ENST00000401522 ZNF570Q96NI8 536 aa16.38■□□□□ 0.21
CHRFAM7A-203ENST00000401522 C17orf80Q9BSJ5 609 aa16.38■□□□□ 0.21
CHRFAM7A-203ENST00000401522 TTPALQ9BTX7 342 aa16.38■□□□□ 0.21
CHRFAM7A-203ENST00000401522 IQCGQ9H095 443 aaKnown RBP16.38■□□□□ 0.21
CHRFAM7A-203ENST00000401522 ETNK2Q9NVF9 386 aa16.38■□□□□ 0.21
CHRFAM7A-203ENST00000401522 HEY2Q9UBP5 337 aa16.38■□□□□ 0.21
CHRFAM7A-203ENST00000401522 NME7Q9Y5B8 376 aa16.38■□□□□ 0.21
CHRFAM7A-203ENST00000401522 A0A1W2PPC1 479 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 MDM4O15151 490 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 CCDC22O60826 627 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 AVILO75366 819 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 LMNAP02545 664 aaKnown RBP16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 C1QAP02745 245 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 GNAZP19086 355 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 LMO2P25791 158 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 RBL1P28749 1068 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 CTNNB1P35222 781 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 ERVK-21P61565 698 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 SMAD3P84022 425 aaKnown RBP16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 SLC6A3Q01959 620 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 KRT72Q14CN4 511 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 RAB6CQ53S08 254 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 SCYL2Q6P3W7 929 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 OSTM1Q86WC4 334 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 FAM172AQ8WUF8 416 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 TTC17Q96AE7 1141 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 SKA1Q96BD8 255 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 PIWIL1Q96J94 861 aaKnown RBP16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 SLC4A5Q9BY07 1137 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 RAB6CQ9H0N0 254 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 ALG13Q9NP73 1137 aaKnown RBP16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 MKS1Q9NXB0 559 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 DDX43Q9NXZ2 648 aaKnown RBP16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 NLRC5Q86WI3 1866 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 TSC2P49815 1807 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 A8MXQ7 604 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 TRIM49D1C9J1S8 452 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 PIK3R2O00459 728 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 GRAP2O75791 330 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 BGNP21810 368 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 CCNFP41002 786 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 PKDCCQ504Y2 493 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 RTP2Q5QGT7 225 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 VARS2Q5ST30 1063 aaKnown RBP16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 PRPF39Q86UA1 669 aaKnown RBP16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 CAND1Q86VP6 1230 aaKnown RBP16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 ZDHHC17Q8IUH5 632 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 CTAGE3PQ8IX95 158 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 CRYBG2Q8N1P7 616 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 THEM5Q8N1Q8 247 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 PPM1NQ8N819 430 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 PCDH19Q8TAB3 1148 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 MTBPQ96DY7 904 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 PTCD3Q96EY7 689 aaKnown RBP16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 NSL1Q96IY1 281 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 B3GALT6Q96L58 329 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 NUDCD1Q96RS6 583 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 SRPK1Q96SB4 655 aaKnown RBP16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 RTP3Q9BQQ7 232 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 ACBD6Q9BR61 282 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 SNRNP25Q9BV90 132 aaKnown RBP16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 TMEM120AQ9BXJ8 343 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 NGRNQ9NPE2 291 aaKnown RBP16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 LZTS1Q9Y250 596 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 HEY1Q9Y5J3 304 aa16.37■□□□□ 0.21
CHRFAM7A-203ENST00000401522 LAMA3Q16787 3333 aa16.36■□□□□ 0.21
CHRFAM7A-203ENST00000401522 VWA8A3KMH1 1905 aa16.36■□□□□ 0.21
CHRFAM7A-203ENST00000401522 DLDP09622 509 aaKnown RBP16.36■□□□□ 0.21
CHRFAM7A-203ENST00000401522 ZFXP17010 805 aaPredicted RBP16.36■□□□□ 0.21
CHRFAM7A-203ENST00000401522 RGS7P49802 495 aa16.36■□□□□ 0.21
CHRFAM7A-203ENST00000401522 ZBTB16Q05516 673 aa16.36■□□□□ 0.21
CHRFAM7A-203ENST00000401522 NAA25Q14CX7 972 aa16.36■□□□□ 0.21
CHRFAM7A-203ENST00000401522 FAM91A1Q658Y4 838 aa16.36■□□□□ 0.21
CHRFAM7A-203ENST00000401522 SPRED2Q7Z698 418 aa16.36■□□□□ 0.21
CHRFAM7A-203ENST00000401522 TMEM110Q86TL2 294 aa16.36■□□□□ 0.21
CHRFAM7A-203ENST00000401522 GPR65Q8IYL9 337 aa16.36■□□□□ 0.21
CHRFAM7A-203ENST00000401522 HERC2P3Q9BVR0 1158 aa16.36■□□□□ 0.21
CHRFAM7A-203ENST00000401522 KCNK13Q9HB14 408 aa16.36■□□□□ 0.21
CHRFAM7A-203ENST00000401522 GPATCH2LQ9NWQ4 482 aa16.36■□□□□ 0.21
CHRFAM7A-203ENST00000401522 NKX1-2Q9UD57 310 aaPredicted RBP16.36■□□□□ 0.21
CHRFAM7A-203ENST00000401522 LUC7L3O95232 432 aaKnown RBP16.35■□□□□ 0.21
CHRFAM7A-203ENST00000401522 APOEP02649 317 aa16.35■□□□□ 0.21
CHRFAM7A-203ENST00000401522 APRTP07741 180 aa16.35■□□□□ 0.21
CHRFAM7A-203ENST00000401522 PDGFRBP09619 1106 aa16.35■□□□□ 0.21
CHRFAM7A-203ENST00000401522 TPBGLP0DKB5 382 aa16.35■□□□□ 0.21
CHRFAM7A-203ENST00000401522 PCSK1P29120 753 aa16.35■□□□□ 0.21
CHRFAM7A-203ENST00000401522 DSG1Q02413 1049 aa16.35■□□□□ 0.21
CHRFAM7A-203ENST00000401522 KIAA0319Q5VV43 1072 aa16.35■□□□□ 0.21
CHRFAM7A-203ENST00000401522 PMF1Q6P1K2 205 aa16.35■□□□□ 0.21
CHRFAM7A-203ENST00000401522 ANKS3Q6ZW76 656 aa16.35■□□□□ 0.21
CHRFAM7A-203ENST00000401522 VPS52Q8N1B4 723 aa16.35■□□□□ 0.21
CHRFAM7A-203ENST00000401522 TNIP3Q96KP6 325 aa16.35■□□□□ 0.21
CHRFAM7A-203ENST00000401522 BTBD10Q9BSF8 475 aa16.35■□□□□ 0.21
CHRFAM7A-203ENST00000401522 C11orf84Q9BUA3 381 aaPredicted RBP16.35■□□□□ 0.21
CHRFAM7A-203ENST00000401522 OXCT2Q9BYC2 517 aaPredicted RBP16.35■□□□□ 0.21
CHRFAM7A-203ENST00000401522 DNAI2Q9GZS0 605 aa16.35■□□□□ 0.21
CHRFAM7A-203ENST00000401522 NKX2-4Q9H2Z4 354 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms